Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8020C21.3
        

               Conread position:
               22-596
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               413
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 215
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               26-648
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               420
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               24, 260
               

               Conread position:
               36-451
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               294
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               37, 13
               

               Conread position:
               36-478
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               315
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               16, 198
               

               Conread position:
               36-481
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               316
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               16, 214
               

               Conread position:
               36-481
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               314
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               36-486
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               312
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 192
               

               Conread position:
               36-490
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               326
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               36-610
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 25
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 644
               

               Conread position:
               39-481
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               49-648
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 421
               

               Conread position:
               51-476
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               307
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               22, 180
               

               Conread position:
               109-281
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               114-648
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 5
               

               Conread position:
               114-672
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               115-621
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               350
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               66, 14
               

               Conread position:
               117-476
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               256
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               42, 95
               

               Conread position:
               117-579
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               326
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               42, 106
               

               Conread position:
               133-480
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               26, 161
               

               Conread position:
               139-672
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               151-658
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               347
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               12, 132
               

               Conread position:
               153-476
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               77, 28
               

               Conread position:
               154-442
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               156-436
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               30, 204
               

               Conread position:
               156-437
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               25, 45
               

               Conread position:
               156-472
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 18
               

               Conread position:
               156-476
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               22, 183
               

               Conread position:
               156-476
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               129, 48
               

               Conread position:
               156-476
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-481
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               240
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               156-486
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-535
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-598
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               333
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               156-614
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               329
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               22, 108
               

               Conread position:
               156-639
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               341
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               156-639
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               341
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 62
               

               Conread position:
               156-640
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               156-645
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               351
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-645
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               353
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               156-646
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               356
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               343
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               358
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               352
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               358
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               360
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               359
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               339
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               350
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               352
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-672
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               357
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               50, 77
               

               Conread position:
               158-486
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               20, 58
               

               Conread position:
               158-592
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               305
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               49, 96
               

               Conread position:
               158-648
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               169-476
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               169-644
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               347
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               9, 50
               

               Conread position:
               170-657
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               349
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               36, 46
               

               Conread position:
               177-478
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 39
               

               Conread position:
               177-481
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 43
               

               Conread position:
               177-492
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               183-492
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               184-489
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               22, 320
               

               Conread position:
               185-648
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               189-648
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               328
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               194-618
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               198-486
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               198-492
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               105, 192
               

               Conread position:
               204-490
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               27, 163
               

               Conread position:
               219-662
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               323
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               220-594
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               61, 76
               

               Conread position:
               222-656
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               61, 94
               

               Conread position:
               223-526
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               69, 230
               

               Conread position:
               239-487
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               46, 84
               

               Conread position:
               242-499
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 107
               

               Conread position:
               249-648
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               292
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               32, 147
               

               Conread position:
               250-495
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               69, 80
               

               Conread position:
               271-662
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               293
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               7, 174
               

               Conread position:
               276-648
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               42, 118
               

               Conread position:
               280-481
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               280-648
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               285-648
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               271
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               7, 112
               

               Conread position:
               286-648
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               268
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               289-672
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               255
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               29, 54
               

               Conread position:
               297-656
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 246
               

               Conread position:
               305-656
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               14, 106
               

               Conread position:
               320-668
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               162, 19
               

               Conread position:
               360-598
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 11
               

               Conread position:
               361-672
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 44
               

               Conread position:
               524-670
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               524-672
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               75, 100
               

               Conread position:
               530-672
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               70, 0
               
Show alignments to all cow chromosomes.