Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8020C21.3
        

               Conread position:
               3-473
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               318
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               75, 36
               

               Conread position:
               9-648
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               428
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               64, 30
               

               Conread position:
               12-476
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               317
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               61, 23
               

               Conread position:
               18-648
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               437
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               11, 393
               

               Conread position:
               22-490
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               333
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               440
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               7, 211
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 214
               

               Conread position:
               23-672
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               444
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               26, 62
               

               Conread position:
               36-481
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               313
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               36-492
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               319
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               42, 407
               

               Conread position:
               36-621
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 196
               

               Conread position:
               49-435
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               49-473
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               293
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               24, 51
               

               Conread position:
               49-648
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               412
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               29, 212
               

               Conread position:
               51-648
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 143
               

               Conread position:
               114-486
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               46, 5
               

               Conread position:
               115-660
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               385
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               44, 26
               

               Conread position:
               116-657
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               364
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               43, 455
               

               Conread position:
               121-646
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               351
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               34, 142
               

               Conread position:
               130-648
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               352
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               39, 27
               

               Conread position:
               133-480
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               26, 49
               

               Conread position:
               150-474
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               13, 77
               

               Conread position:
               156-443
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               66, 24
               

               Conread position:
               156-446
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 33
               

               Conread position:
               156-466
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-471
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               50, 9
               

               Conread position:
               156-476
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               14, 79
               

               Conread position:
               156-486
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               54, 28
               

               Conread position:
               156-492
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-498
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-498
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               51, 28
               

               Conread position:
               156-645
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               349
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               22, 73
               

               Conread position:
               156-647
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               356
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               22, 250
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               353
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               355
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               22, 257
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               356
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               357
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               22, 250
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               351
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               346
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               349
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               22, 246
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 132
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               355
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-667
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 64
               

               Conread position:
               157-483
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 87
               

               Conread position:
               157-625
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               308
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 60
               

               Conread position:
               157-659
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               348
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 59
               

               Conread position:
               158-600
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               322
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               158-648
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               329
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               18, 98
               

               Conread position:
               159-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               159-660
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 111
               

               Conread position:
               169-647
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               333
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               37, 59
               

               Conread position:
               176-636
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 41
               

               Conread position:
               177-478
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               33, 39
               

               Conread position:
               177-648
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               336
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               177-648
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               328
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               30, 39
               

               Conread position:
               183-479
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               183-647
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               184-648
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               344
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 221
               

               Conread position:
               189-595
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               17, 30
               

               Conread position:
               189-648
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               327
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               29, 44
               

               Conread position:
               200-492
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               205-589
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               23, 150
               

               Conread position:
               215-465
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 12
               

               Conread position:
               217-476
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 10
               

               Conread position:
               218-646
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               303
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               25, 36
               

               Conread position:
               220-672
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               318
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               20, 40
               

               Conread position:
               224-672
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               319
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               131, 8
               

               Conread position:
               226-490
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               41, 271
               

               Conread position:
               227-477
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 110
               

               Conread position:
               227-646
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               56, 218
               

               Conread position:
               227-648
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               303
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               58, 91
               

               Conread position:
               227-672
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               311
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               52, 167
               

               Conread position:
               228-648
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               302
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               240-490
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               47, 11
               

               Conread position:
               242-648
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               283
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               76, 34
               

               Conread position:
               247-598
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 211
               

               Conread position:
               276-461
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               280-492
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               38, 116
               

               Conread position:
               290-492
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 105
               

               Conread position:
               291-475
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 148
               

               Conread position:
               301-499
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               18, 45
               

               Conread position:
               350-648
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 132
               

               Conread position:
               394-647
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               35, 51
               

               Conread position:
               525-646
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               526-672
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               120, 0
               
Show alignments to all cow chromosomes.