Cow genome map

Conread name: Ss1.1-Pig3-SRG8020C21.3

Conread position: 10-481
Cow position:
Alignm length: 505
Alignm identity: 332
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 409

Conread position: 22-481
Cow position:
Alignm length: 496
Alignm identity: 323
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 0

Conread position: 22-648
Cow position:
Alignm length: 680
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 213

Conread position: 22-648
Cow position:
Alignm length: 684
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 25-648
Cow position:
Alignm length: 669
Alignm identity: 433
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 63

Conread position: 36-481
Cow position:
Alignm length: 482
Alignm identity: 316
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 16, 196

Conread position: 36-481
Cow position:
Alignm length: 481
Alignm identity: 309
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 36-481
Cow position:
Alignm length: 477
Alignm identity: 309
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 16, 207

Conread position: 36-490
Cow position:
Alignm length: 480
Alignm identity: 307
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 133

Conread position: 36-645
Cow position:
Alignm length: 661
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 195

Conread position: 36-647
Cow position:
Alignm length: 661
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 185

Conread position: 36-648
Cow position:
Alignm length: 662
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 202

Conread position: 36-648
Cow position:
Alignm length: 669
Alignm identity: 440
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 176

Conread position: 36-648
Cow position:
Alignm length: 664
Alignm identity: 423
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 11, 56

Conread position: 36-648
Cow position:
Alignm length: 668
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 36-648
Cow position:
Alignm length: 656
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 182

Conread position: 36-648
Cow position:
Alignm length: 655
Alignm identity: 419
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 16, 181

Conread position: 36-648
Cow position:
Alignm length: 655
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 65

Conread position: 36-648
Cow position:
Alignm length: 664
Alignm identity: 429
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 10, 199

Conread position: 36-657
Cow position:
Alignm length: 675
Alignm identity: 431
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 69, 191

Conread position: 36-659
Cow position:
Alignm length: 677
Alignm identity: 436
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 16, 117

Conread position: 51-476
Cow position:
Alignm length: 462
Alignm identity: 307
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 23, 37

Conread position: 53-487
Cow position:
Alignm length: 465
Alignm identity: 300
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 20, 35

Conread position: 105-472
Cow position:
Alignm length: 389
Alignm identity: 256
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 32, 110

Conread position: 105-625
Cow position:
Alignm length: 555
Alignm identity: 363
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 57, 28

Conread position: 108-656
Cow position:
Alignm length: 586
Alignm identity: 378
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 78, 42

Conread position: 112-670
Cow position:
Alignm length: 596
Alignm identity: 386
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 171, 7

Conread position: 114-606
Cow position:
Alignm length: 526
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 5

Conread position: 117-632
Cow position:
Alignm length: 555
Alignm identity: 362
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 102

Conread position: 117-671
Cow position:
Alignm length: 586
Alignm identity: 377
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 40, 104

Conread position: 127-594
Cow position:
Alignm length: 510
Alignm identity: 337
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 33

Conread position: 128-487
Cow position:
Alignm length: 389
Alignm identity: 260
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 20, 193

Conread position: 129-672
Cow position:
Alignm length: 578
Alignm identity: 373
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 27, 64

Conread position: 130-648
Cow position:
Alignm length: 548
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 257

Conread position: 132-599
Cow position:
Alignm length: 498
Alignm identity: 335
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 13

Conread position: 133-450
Cow position:
Alignm length: 338
Alignm identity: 228
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 36, 29

Conread position: 134-648
Cow position:
Alignm length: 536
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 107

Conread position: 137-471
Cow position:
Alignm length: 347
Alignm identity: 235
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 55

Conread position: 141-490
Cow position:
Alignm length: 365
Alignm identity: 244
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 65, 139

Conread position: 145-648
Cow position:
Alignm length: 545
Alignm identity: 359
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 33, 0

Conread position: 150-648
Cow position:
Alignm length: 522
Alignm identity: 346
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 7, 68

Conread position: 151-589
Cow position:
Alignm length: 470
Alignm identity: 317
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 30, 122

Conread position: 153-486
Cow position:
Alignm length: 356
Alignm identity: 250
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 12, 66

Conread position: 153-659
Cow position:
Alignm length: 550
Alignm identity: 359
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 25, 64

Conread position: 155-648
Cow position:
Alignm length: 524
Alignm identity: 343
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 29, 5

Conread position: 155-648
Cow position:
Alignm length: 529
Alignm identity: 358
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 29, 6

Conread position: 156-474
Cow position:
Alignm length: 337
Alignm identity: 231
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 221

Conread position: 156-476
Cow position:
Alignm length: 340
Alignm identity: 237
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 22, 61

Conread position: 156-476
Cow position:
Alignm length: 348
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 256

Conread position: 156-481
Cow position:
Alignm length: 346
Alignm identity: 233
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 156-486
Cow position:
Alignm length: 353
Alignm identity: 238
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 61

Conread position: 156-486
Cow position:
Alignm length: 354
Alignm identity: 247
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 61

Conread position: 156-486
Cow position:
Alignm length: 347
Alignm identity: 222
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 152

Conread position: 156-486
Cow position:
Alignm length: 354
Alignm identity: 250
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 61

Conread position: 156-490
Cow position:
Alignm length: 363
Alignm identity: 248
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 306

Conread position: 156-490
Cow position:
Alignm length: 345
Alignm identity: 217
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 13

Conread position: 156-490
Cow position:
Alignm length: 345
Alignm identity: 229
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 60

Conread position: 156-490
Cow position:
Alignm length: 348
Alignm identity: 233
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 49

Conread position: 156-490
Cow position:
Alignm length: 350
Alignm identity: 236
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 117

Conread position: 156-490
Cow position:
Alignm length: 350
Alignm identity: 239
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 22, 0

Conread position: 156-490
Cow position:
Alignm length: 353
Alignm identity: 241
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 22, 172

Conread position: 156-490
Cow position:
Alignm length: 347
Alignm identity: 231
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 63

Conread position: 156-490
Cow position:
Alignm length: 349
Alignm identity: 243
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 65, 28

Conread position: 156-492
Cow position:
Alignm length: 359
Alignm identity: 246
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 29, 61

Conread position: 156-596
Cow position:
Alignm length: 482
Alignm identity: 313
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 39, 61

Conread position: 156-598
Cow position:
Alignm length: 481
Alignm identity: 322
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 77

Conread position: 156-598
Cow position:
Alignm length: 479
Alignm identity: 317
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 24, 248

Conread position: 156-634
Cow position:
Alignm length: 518
Alignm identity: 338
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 82

Conread position: 156-637
Cow position:
Alignm length: 519
Alignm identity: 347
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 56

Conread position: 156-643
Cow position:
Alignm length: 533
Alignm identity: 359
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 22, 58

Conread position: 156-645
Cow position:
Alignm length: 531
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 156-647
Cow position:
Alignm length: 535
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 61

Conread position: 156-648
Cow position:
Alignm length: 532
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 72

Conread position: 156-648
Cow position:
Alignm length: 515
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 108

Conread position: 156-648
Cow position:
Alignm length: 535
Alignm identity: 355
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 22, 65

Conread position: 156-648
Cow position:
Alignm length: 532
Alignm identity: 354
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 77

Conread position: 156-648
Cow position:
Alignm length: 535
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 61

Conread position: 156-648
Cow position:
Alignm length: 534
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 56

Conread position: 156-648
Cow position:
Alignm length: 537
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 253

Conread position: 156-648
Cow position:
Alignm length: 534
Alignm identity: 358
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 22, 56

Conread position: 156-648
Cow position:
Alignm length: 535
Alignm identity: 356
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 173

Conread position: 156-648
Cow position:
Alignm length: 536
Alignm identity: 366
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 45

Conread position: 156-648
Cow position:
Alignm length: 539
Alignm identity: 353
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 22, 60

Conread position: 156-648
Cow position:
Alignm length: 535
Alignm identity: 356
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 251

Conread position: 156-648
Cow position:
Alignm length: 535
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 250

Conread position: 156-648
Cow position:
Alignm length: 546
Alignm identity: 364
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 251

Conread position: 156-659
Cow position:
Alignm length: 547
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 61

Conread position: 157-648
Cow position:
Alignm length: 533
Alignm identity: 353
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 0

Conread position: 158-460
Cow position:
Alignm length: 323
Alignm identity: 226
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 59

Conread position: 158-648
Cow position:
Alignm length: 543
Alignm identity: 356
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 20, 255

Conread position: 158-648
Cow position:
Alignm length: 534
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 59

Conread position: 160-643
Cow position:
Alignm length: 527
Alignm identity: 348
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 61, 0

Conread position: 160-645
Cow position:
Alignm length: 527
Alignm identity: 349
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 18, 57

Conread position: 161-473
Cow position:
Alignm length: 325
Alignm identity: 220
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 307

Conread position: 177-487
Cow position:
Alignm length: 327
Alignm identity: 214
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 41

Conread position: 183-487
Cow position:
Alignm length: 324
Alignm identity: 229
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 35, 27

Conread position: 185-648
Cow position:
Alignm length: 505
Alignm identity: 335
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 31

Conread position: 190-670
Cow position:
Alignm length: 506
Alignm identity: 335
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 16, 84

Conread position: 204-633
Cow position:
Alignm length: 458
Alignm identity: 290
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 67

Conread position: 210-672
Cow position:
Alignm length: 498
Alignm identity: 330
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 71, 17

Conread position: 219-648
Cow position:
Alignm length: 465
Alignm identity: 314
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 11, 184

Conread position: 223-672
Cow position:
Alignm length: 458
Alignm identity: 308
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 93, 46

Conread position: 227-648
Cow position:
Alignm length: 447
Alignm identity: 300
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 58, 88

Conread position: 228-470
Cow position:
Alignm length: 257
Alignm identity: 174
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 219

Conread position: 228-633
Cow position:
Alignm length: 446
Alignm identity: 306
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 39, 52

Conread position: 232-648
Cow position:
Alignm length: 453
Alignm identity: 297
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 232-648
Cow position:
Alignm length: 453
Alignm identity: 300
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 216

Conread position: 242-482
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 107

Conread position: 242-644
Cow position:
Alignm length: 419
Alignm identity: 287
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 20, 30

Conread position: 249-478
Cow position:
Alignm length: 246
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 204

Conread position: 249-490
Cow position:
Alignm length: 257
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 151

Conread position: 254-648
Cow position:
Alignm length: 431
Alignm identity: 286
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 260-473
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 132

Conread position: 280-492
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 280-646
Cow position:
Alignm length: 399
Alignm identity: 264
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 38, 115

Conread position: 280-662
Cow position:
Alignm length: 418
Alignm identity: 281
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 289-473
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 107

Conread position: 289-486
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 302-648
Cow position:
Alignm length: 378
Alignm identity: 257
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 16, 270

Conread position: 303-492
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 162

Conread position: 354-637
Cow position:
Alignm length: 296
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 120, 35

Conread position: 400-672
Cow position:
Alignm length: 287
Alignm identity: 202
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 5

Conread position: 438-672
Cow position:
Alignm length: 258
Alignm identity: 190
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 56, 137

Show alignments to all cow chromosomes.