Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8020C21.3
        

               Conread position:
               8-473
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               304
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               65, 37
               

               Conread position:
               22-481
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               325
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               22-481
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               317
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               22-593
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               411
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 173
               

               Conread position:
               22-662
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               438
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               44, 26
               

               Conread position:
               22-662
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 277
               

               Conread position:
               36-486
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               328
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               16, 194
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 558
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               429
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               17, 180
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               436
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               16, 196
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 198
               

               Conread position:
               36-671
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               437
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               42, 408
               

               Conread position:
               51-481
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               310
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               22, 180
               

               Conread position:
               51-662
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 52
               

               Conread position:
               56-648
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               409
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               26, 228
               

               Conread position:
               99-490
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               85, 30
               

               Conread position:
               119-646
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               360
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               89, 43
               

               Conread position:
               128-648
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               370
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               29, 275
               

               Conread position:
               147-476
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 116
               

               Conread position:
               150-478
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               7, 68
               

               Conread position:
               152-648
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               354
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               26, 201
               

               Conread position:
               153-461
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               53, 34
               

               Conread position:
               153-487
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               59, 247
               

               Conread position:
               156-481
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-481
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-486
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 245
               

               Conread position:
               156-489
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               50, 60
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               355
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               22, 252
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 468
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               346
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               344
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               355
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               341
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 24
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               344
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               22, 56
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               351
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               341
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               28, 64
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               362
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               22, 9
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               352
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               28, 38
               

               Conread position:
               156-653
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 31
               

               Conread position:
               156-660
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               347
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               22, 124
               

               Conread position:
               157-622
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               322
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               28, 50
               

               Conread position:
               158-490
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               248
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               26, 293
               

               Conread position:
               158-596
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               307
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               169-648
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               337
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               9, 203
               

               Conread position:
               169-668
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               358
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               177-476
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               183-661
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               351
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               190-660
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               311
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               16, 65
               

               Conread position:
               191-499
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               39, 188
               

               Conread position:
               218-648
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               22, 232
               

               Conread position:
               218-666
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               329
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               16, 233
               

               Conread position:
               224-481
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               126, 59
               

               Conread position:
               231-485
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               30, 5
               

               Conread position:
               239-648
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               281
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               255-648
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               267-481
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               289-594
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               29, 107
               

               Conread position:
               298-648
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 209
               

               Conread position:
               301-500
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               16, 41
               

               Conread position:
               305-672
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               15, 63
               

               Conread position:
               320-656
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               30, 67
               

               Conread position:
               350-657
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               36, 88
               

               Conread position:
               415-666
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               420-648
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 16
               

               Conread position:
               524-670
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               63, 0
               
Show alignments to all cow chromosomes.