Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8020C21.3
        

               Conread position:
               13-490
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               332
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               37, 91
               

               Conread position:
               19-481
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               331
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               22-481
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               325
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               7, 450
               

               Conread position:
               22-481
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               320
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               7, 208
               

               Conread position:
               22-645
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 391
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 258
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 214
               

               Conread position:
               32-647
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               427
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               16, 80
               

               Conread position:
               34-648
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 197
               

               Conread position:
               36-461
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 116
               

               Conread position:
               36-476
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               312
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               16, 367
               

               Conread position:
               36-492
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               318
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               10, 44
               

               Conread position:
               36-645
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               404
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 133
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 190
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               436
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               16, 192
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               433
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               16, 196
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               439
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               16, 104
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 131
               

               Conread position:
               36-660
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 54
               

               Conread position:
               36-662
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               436
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               39-648
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 357
               

               Conread position:
               51-481
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               312
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               22, 377
               

               Conread position:
               117-591
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 275
               

               Conread position:
               117-666
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 106
               

               Conread position:
               122-621
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               340
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               99, 40
               

               Conread position:
               128-671
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               385
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               31, 81
               

               Conread position:
               130-469
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               40, 30
               

               Conread position:
               138-637
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               354
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               40, 12
               

               Conread position:
               142-672
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 18
               

               Conread position:
               155-492
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               35, 228
               

               Conread position:
               156-473
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               156-486
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               22, 256
               

               Conread position:
               156-487
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               29, 233
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               156-498
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               22, 294
               

               Conread position:
               156-594
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               328
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-606
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 62
               

               Conread position:
               156-639
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               343
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               156-644
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               334
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               22, 250
               

               Conread position:
               156-646
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 72
               

               Conread position:
               156-647
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 250
               

               Conread position:
               156-647
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               359
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               349
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               364
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               318
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               311
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 249
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 9
               

               Conread position:
               156-661
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               356
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               28, 246
               

               Conread position:
               156-672
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 60
               

               Conread position:
               157-504
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               27, 105
               

               Conread position:
               158-648
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               348
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               20, 59
               

               Conread position:
               159-486
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 223
               

               Conread position:
               173-660
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               342
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               177-443
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               29, 56
               

               Conread position:
               177-668
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               350
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               29, 173
               

               Conread position:
               184-486
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               184-648
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               331
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               22, 30
               

               Conread position:
               185-648
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               330
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               21, 35
               

               Conread position:
               191-648
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               330
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               15, 169
               

               Conread position:
               194-632
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               288
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               196-476
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               25, 208
               

               Conread position:
               198-648
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               330
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               199-672
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               337
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 224
               

               Conread position:
               208-481
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               231-648
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               31, 108
               

               Conread position:
               240-474
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               41, 125
               

               Conread position:
               253-648
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               292
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               255-648
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               259-490
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               27, 138
               

               Conread position:
               276-638
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               43, 120
               

               Conread position:
               350-632
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               367-648
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 75
               

               Conread position:
               382-653
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               525-672
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               76, 0
               
Show alignments to all cow chromosomes.