Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8020C21.3
        

               Conread position:
               19-648
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 210
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               443
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               7, 425
               

               Conread position:
               36-634
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               430
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               16, 65
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 196
               

               Conread position:
               36-655
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 189
               

               Conread position:
               40-612
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               394
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               79, 14
               

               Conread position:
               51-648
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               427
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               22, 170
               

               Conread position:
               82-490
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 60
               

               Conread position:
               117-487
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               40, 106
               

               Conread position:
               117-490
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               40, 13
               

               Conread position:
               117-490
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               40, 106
               

               Conread position:
               130-598
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               331
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               137-487
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               38, 70
               

               Conread position:
               155-476
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 282
               

               Conread position:
               156-440
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               22, 72
               

               Conread position:
               156-451
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               19, 188
               

               Conread position:
               156-473
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-473
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               18, 300
               

               Conread position:
               156-476
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               29, 252
               

               Conread position:
               156-492
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               22, 59
               

               Conread position:
               156-493
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 185
               

               Conread position:
               156-594
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               307
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-599
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               311
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 144
               

               Conread position:
               156-634
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               349
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-644
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 59
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               352
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 187
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               342
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 224
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               342
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 56
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 251
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               362
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               22, 259
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               156-657
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               355
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               22, 72
               

               Conread position:
               156-665
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               369
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-671
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               352
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               50, 287
               

               Conread position:
               156-671
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 297
               

               Conread position:
               156-672
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 60
               

               Conread position:
               158-648
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               350
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               20, 59
               

               Conread position:
               160-427
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               24, 125
               

               Conread position:
               160-490
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               46, 285
               

               Conread position:
               161-645
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               354
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               9, 57
               

               Conread position:
               169-648
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               330
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               11, 65
               

               Conread position:
               170-492
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 119
               

               Conread position:
               173-595
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               311
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               110, 33
               

               Conread position:
               176-660
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 57
               

               Conread position:
               177-476
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               177-648
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               327
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               108, 41
               

               Conread position:
               184-490
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 129
               

               Conread position:
               186-487
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               190-492
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 78
               

               Conread position:
               196-498
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               85, 56
               

               Conread position:
               196-598
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               297
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               199-492
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               7, 69
               

               Conread position:
               206-537
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               26, 197
               

               Conread position:
               207-648
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 8
               

               Conread position:
               220-476
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               226-672
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 127
               

               Conread position:
               227-504
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               53, 278
               

               Conread position:
               227-648
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               31, 405
               

               Conread position:
               232-648
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               239-487
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               253-475
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 95
               

               Conread position:
               280-492
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               280-672
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               295
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               39, 136
               

               Conread position:
               282-646
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               36, 347
               

               Conread position:
               286-634
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               257
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               291-490
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               310-648
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               37, 5
               

               Conread position:
               525-672
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               76, 63
               

               Conread position:
               526-672
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               75, 0
               
Show alignments to all cow chromosomes.