Cow genome map
Conread name: | Ss1.1-Pig3-SRG8020C21.3 |
Conread position: | 2-648 |
Cow position: | chr20:6136624-6135920 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 15-648 |
Cow position: | chr20:3677938-3677297 (view UCSC Genome Browser custom track) |
Alignm length: | 669 |
Alignm identity: | 425 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 27, 159 |
Conread position: | 22-634 |
Cow position: | chr20:20440563-20439915 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 533 |
Conread position: | 22-648 |
Cow position: | chr20:18355617-18356300 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 445 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 22-648 |
Cow position: | chr20:30385838-30385176 (view UCSC Genome Browser custom track) |
Alignm length: | 674 |
Alignm identity: | 433 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 7, 53 |
Conread position: | 22-648 |
Cow position: | chr20:30578278-30578932 (view UCSC Genome Browser custom track) |
Alignm length: | 662 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 215 |
Conread position: | 22-660 |
Cow position: | chr20:16560155-16559459 (view UCSC Genome Browser custom track) |
Alignm length: | 697 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 32-648 |
Cow position: | chr20:39233628-39234300 (view UCSC Genome Browser custom track) |
Alignm length: | 673 |
Alignm identity: | 434 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 36-648 |
Cow position: | chr20:7598450-7597788 (view UCSC Genome Browser custom track) |
Alignm length: | 666 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 185 |
Conread position: | 36-648 |
Cow position: | chr20:8971481-8970824 (view UCSC Genome Browser custom track) |
Alignm length: | 660 |
Alignm identity: | 423 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 10, 48 |
Conread position: | 36-648 |
Cow position: | chr20:12568909-12568247 (view UCSC Genome Browser custom track) |
Alignm length: | 664 |
Alignm identity: | 432 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 16, 195 |
Conread position: | 36-648 |
Cow position: | chr20:19844192-19844846 (view UCSC Genome Browser custom track) |
Alignm length: | 662 |
Alignm identity: | 429 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 16, 196 |
Conread position: | 36-648 |
Cow position: | chr20:24541827-24542495 (view UCSC Genome Browser custom track) |
Alignm length: | 669 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 36-648 |
Cow position: | chr20:27875884-27876549 (view UCSC Genome Browser custom track) |
Alignm length: | 669 |
Alignm identity: | 432 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 16, 194 |
Conread position: | 36-648 |
Cow position: | chr20:28444945-28444279 (view UCSC Genome Browser custom track) |
Alignm length: | 668 |
Alignm identity: | 430 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 16, 52 |
Conread position: | 36-662 |
Cow position: | chr20:21718967-21719645 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 445 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 199 |
Conread position: | 36-662 |
Cow position: | chr20:34459902-34459225 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 221 |
Conread position: | 39-492 |
Cow position: | chr20:30461644-30461170 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 70 |
Conread position: | 39-632 |
Cow position: | chr20:37582491-37583111 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 414 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 7, 58 |
Conread position: | 49-648 |
Cow position: | chr20:22696607-22695986 (view UCSC Genome Browser custom track) |
Alignm length: | 638 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 12 |
Conread position: | 49-671 |
Cow position: | chr20:23899804-23900457 (view UCSC Genome Browser custom track) |
Alignm length: | 670 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 181 |
Conread position: | 51-672 |
Cow position: | chr20:20185175-20185836 (view UCSC Genome Browser custom track) |
Alignm length: | 671 |
Alignm identity: | 435 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 31, 15 |
Conread position: | 117-490 |
Cow position: | chr20:31079880-31080264 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 254 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 42, 105 |
Conread position: | 117-672 |
Cow position: | chr20:10495483-10496081 (view UCSC Genome Browser custom track) |
Alignm length: | 602 |
Alignm identity: | 392 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 41, 13 |
Conread position: | 119-646 |
Cow position: | chr20:29053834-29054390 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 404 |
Conread position: | 154-647 |
Cow position: | chr20:870470-869948 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 354 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 30, 43 |
Conread position: | 155-648 |
Cow position: | chr20:35160044-35159513 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 352 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 23, 250 |
Conread position: | 155-671 |
Cow position: | chr20:7811293-7810744 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 360 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 23, 79 |
Conread position: | 156-476 |
Cow position: | chr20:33182148-33181812 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 229 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 22, 61 |
Conread position: | 156-480 |
Cow position: | chr20:5537465-5537806 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 230 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 22, 299 |
Conread position: | 156-481 |
Cow position: | chr20:19440452-19440796 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 234 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 22, 13 |
Conread position: | 156-489 |
Cow position: | chr20:19244011-19244351 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 241 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 111, 54 |
Conread position: | 156-490 |
Cow position: | chr20:2653679-2654019 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 235 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 28, 44 |
Conread position: | 156-490 |
Cow position: | chr20:5793413-5793766 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 239 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 22, 305 |
Conread position: | 156-490 |
Cow position: | chr20:35019458-35019808 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 234 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 29, 152 |
Conread position: | 156-499 |
Cow position: | chr20:4736782-4736429 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 239 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 30, 78 |
Conread position: | 156-622 |
Cow position: | chr20:5936456-5935964 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 331 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 28, 12 |
Conread position: | 156-645 |
Cow position: | chr20:14757719-14757190 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 346 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 22, 61 |
Conread position: | 156-648 |
Cow position: | chr20:2180215-2179698 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 344 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 28, 420 |
Conread position: | 156-648 |
Cow position: | chr20:3809233-3808704 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 353 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 22, 484 |
Conread position: | 156-648 |
Cow position: | chr20:6476067-6476589 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 348 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 22, 61 |
Conread position: | 156-648 |
Cow position: | chr20:13788669-13789177 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 354 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 56, 72 |
Conread position: | 156-648 |
Cow position: | chr20:24568733-24568200 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 156-648 |
Cow position: | chr20:25846084-25845554 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 61 |
Conread position: | 156-648 |
Cow position: | chr20:30430808-30431341 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 356 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 22, 65 |
Conread position: | 156-648 |
Cow position: | chr20:38956674-38957207 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 356 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 22, 249 |
Conread position: | 156-655 |
Cow position: | chr20:12332230-12332752 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 337 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 22, 79 |
Conread position: | 156-660 |
Cow position: | chr20:37956281-37955774 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 137 |
Conread position: | 157-645 |
Cow position: | chr20:35144342-35143838 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 344 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 21, 60 |
Conread position: | 158-486 |
Cow position: | chr20:13765436-13765780 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 239 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 20, 35 |
Conread position: | 161-648 |
Cow position: | chr20:13654748-13654259 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 343 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 23, 108 |
Conread position: | 165-518 |
Cow position: | chr20:1535013-1534631 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 264 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 41, 243 |
Conread position: | 165-648 |
Cow position: | chr20:35108642-35108118 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 347 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 167-492 |
Cow position: | chr20:28724302-28724648 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 234 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 39, 241 |
Conread position: | 168-441 |
Cow position: | chr20:11411483-11411195 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 202 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 17, 49 |
Conread position: | 168-645 |
Cow position: | chr20:825328-825846 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 340 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 169-646 |
Cow position: | chr20:36419165-36418650 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 335 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 43, 13 |
Conread position: | 172-461 |
Cow position: | chr20:28101876-28102178 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 211 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 35, 211 |
Conread position: | 176-585 |
Cow position: | chr20:4772256-4772695 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 305 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 30, 99 |
Conread position: | 177-648 |
Cow position: | chr20:13507000-13506489 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 339 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 29, 43 |
Conread position: | 184-648 |
Cow position: | chr20:14926077-14925573 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 332 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 193-648 |
Cow position: | chr20:42085107-42085602 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 329 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 196-648 |
Cow position: | chr20:28561307-28560815 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 328 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 10, 20 |
Conread position: | 198-491 |
Cow position: | chr20:34361818-34362111 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 195 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 12, 21 |
Conread position: | 204-490 |
Cow position: | chr20:13576129-13575827 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 216 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 26, 193 |
Conread position: | 227-504 |
Cow position: | chr20:13062463-13062742 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 196 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 54, 119 |
Conread position: | 227-664 |
Cow position: | chr20:32125975-32125510 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 310 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 58, 165 |
Conread position: | 265-648 |
Cow position: | chr20:28035198-28034787 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 277 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 7, 15 |
Conread position: | 281-648 |
Cow position: | chr20:22061506-22061108 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 265 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 289-645 |
Cow position: | chr20:22186451-22186067 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 255 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 29, 378 |
Conread position: | 524-660 |
Cow position: | chr20:13062797-13062932 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 106 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 75, 110 |
Conread position: | 525-672 |
Cow position: | chr20:1534585-1534439 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 74, 118 |
Show alignments to all cow chromosomes.