Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8020C21.3
        

               Conread position:
               2-648
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               15-648
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               425
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               27, 159
               

               Conread position:
               22-634
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 533
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               433
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               7, 53
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 215
               

               Conread position:
               22-660
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               32-648
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               434
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 185
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               423
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               10, 48
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               432
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               16, 195
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               429
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               16, 196
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               432
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               16, 194
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               430
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               16, 52
               

               Conread position:
               36-662
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 199
               

               Conread position:
               36-662
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 221
               

               Conread position:
               39-492
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 70
               

               Conread position:
               39-632
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               414
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               7, 58
               

               Conread position:
               49-648
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 12
               

               Conread position:
               49-671
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 181
               

               Conread position:
               51-672
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               435
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               117-490
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 105
               

               Conread position:
               117-672
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               392
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               41, 13
               

               Conread position:
               119-646
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 404
               

               Conread position:
               154-647
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               354
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               155-648
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               352
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               23, 250
               

               Conread position:
               155-671
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               360
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               156-476
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-480
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 299
               

               Conread position:
               156-481
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               22, 13
               

               Conread position:
               156-489
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               111, 54
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               28, 44
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               22, 305
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               29, 152
               

               Conread position:
               156-499
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 78
               

               Conread position:
               156-622
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               331
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               28, 12
               

               Conread position:
               156-645
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               346
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               344
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               28, 420
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               353
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               22, 484
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               348
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               354
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               56, 72
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               356
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               22, 65
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               356
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               22, 249
               

               Conread position:
               156-655
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               337
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 79
               

               Conread position:
               156-660
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 137
               

               Conread position:
               157-645
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               344
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               21, 60
               

               Conread position:
               158-486
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 35
               

               Conread position:
               161-648
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               343
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               23, 108
               

               Conread position:
               165-518
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               264
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               41, 243
               

               Conread position:
               165-648
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               347
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               167-492
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               39, 241
               

               Conread position:
               168-441
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               168-645
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               340
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               169-646
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               335
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 13
               

               Conread position:
               172-461
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               35, 211
               

               Conread position:
               176-585
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               305
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               30, 99
               

               Conread position:
               177-648
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               339
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               29, 43
               

               Conread position:
               184-648
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               332
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               193-648
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               329
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               196-648
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               328
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               10, 20
               

               Conread position:
               198-491
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 21
               

               Conread position:
               204-490
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               26, 193
               

               Conread position:
               227-504
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               54, 119
               

               Conread position:
               227-664
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               310
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               58, 165
               

               Conread position:
               265-648
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               7, 15
               

               Conread position:
               281-648
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               265
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               289-645
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 378
               

               Conread position:
               524-660
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               75, 110
               

               Conread position:
               525-672
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               74, 118
               
Show alignments to all cow chromosomes.