Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8020C21.3
        

               Conread position:
               8-490
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               328
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               42, 321
               

               Conread position:
               15-214
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               78, 118
               

               Conread position:
               22-442
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               302
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               7, 159
               

               Conread position:
               22-477
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               324
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               7, 448
               

               Conread position:
               22-481
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               328
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 44
               

               Conread position:
               36-486
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               326
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               16, 196
               

               Conread position:
               36-491
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               329
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               10, 180
               

               Conread position:
               36-610
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 215
               

               Conread position:
               36-634
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 196
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 116
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               428
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               14, 624
               

               Conread position:
               39-648
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               426
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               7, 188
               

               Conread position:
               49-666
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               430
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               83, 40
               

               Conread position:
               52-487
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               311
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               21, 54
               

               Conread position:
               56-352
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 181
               

               Conread position:
               115-490
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               269
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               91, 15
               

               Conread position:
               115-491
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               284
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               69, 38
               

               Conread position:
               115-614
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               122-453
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 78
               

               Conread position:
               128-444
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 141
               

               Conread position:
               128-491
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               268
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               133-651
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               370
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               26, 31
               

               Conread position:
               142-492
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               64, 8
               

               Conread position:
               142-634
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 8
               

               Conread position:
               142-669
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 74
               

               Conread position:
               153-481
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               25, 64
               

               Conread position:
               153-659
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 62
               

               Conread position:
               155-632
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               337
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               32, 74
               

               Conread position:
               156-481
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               156-486
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-486
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               23, 61
               

               Conread position:
               156-486
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               250
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               22, 56
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               39, 13
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               243
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               28, 68
               

               Conread position:
               156-618
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               309
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               156-647
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               326
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               50, 58
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               356
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               22, 250
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               358
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               349
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               65, 24
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-657
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               356
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               23, 61
               

               Conread position:
               156-659
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               362
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               22, 9
               

               Conread position:
               157-470
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 244
               

               Conread position:
               157-588
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               23, 50
               

               Conread position:
               158-476
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 54
               

               Conread position:
               158-595
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               305
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               20, 59
               

               Conread position:
               158-645
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               355
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               22, 59
               

               Conread position:
               160-476
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               24, 74
               

               Conread position:
               160-648
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 57
               

               Conread position:
               170-475
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 156
               

               Conread position:
               171-487
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               7, 333
               

               Conread position:
               176-487
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               176-672
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               340
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               30, 159
               

               Conread position:
               177-455
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 33
               

               Conread position:
               189-645
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               332
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               32, 484
               

               Conread position:
               197-467
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               221-492
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               126, 10
               

               Conread position:
               241-648
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               253-648
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               255-490
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 55
               

               Conread position:
               276-578
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               68, 18
               

               Conread position:
               307-490
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               11, 85
               

               Conread position:
               326-483
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               433-647
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 66
               

               Conread position:
               523-672
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               132
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               36, 0
               
Show alignments to all cow chromosomes.