Cow genome map
Conread name: | Ss1.1-Pig3-SRG8020C21.3 |
Conread position: | 8-490 |
Cow position: | chr21:34656449-34656956 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 328 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 42, 321 |
Conread position: | 15-214 |
Cow position: | chr21:20771700-20771909 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 163 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 78, 118 |
Conread position: | 22-442 |
Cow position: | chr21:39225557-39225107 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 302 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 7, 159 |
Conread position: | 22-477 |
Cow position: | chr21:7063171-7062681 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 324 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 7, 448 |
Conread position: | 22-481 |
Cow position: | chr21:4481795-4482290 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 328 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 22-648 |
Cow position: | chr21:6966961-6966293 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 44 |
Conread position: | 36-486 |
Cow position: | chr21:17143190-17143677 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 326 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 16, 196 |
Conread position: | 36-491 |
Cow position: | chr21:29909798-29909318 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 329 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 10, 180 |
Conread position: | 36-610 |
Cow position: | chr21:44531711-44532325 (view UCSC Genome Browser custom track) |
Alignm length: | 620 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 215 |
Conread position: | 36-634 |
Cow position: | chr21:37373740-37374380 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 196 |
Conread position: | 36-648 |
Cow position: | chr21:2513365-2514029 (view UCSC Genome Browser custom track) |
Alignm length: | 668 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 116 |
Conread position: | 36-648 |
Cow position: | chr21:36375502-36376169 (view UCSC Genome Browser custom track) |
Alignm length: | 668 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 36-648 |
Cow position: | chr21:41797209-41796542 (view UCSC Genome Browser custom track) |
Alignm length: | 669 |
Alignm identity: | 428 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 14, 624 |
Conread position: | 39-648 |
Cow position: | chr21:36978386-36977732 (view UCSC Genome Browser custom track) |
Alignm length: | 660 |
Alignm identity: | 426 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 7, 188 |
Conread position: | 49-666 |
Cow position: | chr21:35390601-35389950 (view UCSC Genome Browser custom track) |
Alignm length: | 663 |
Alignm identity: | 430 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 83, 40 |
Conread position: | 52-487 |
Cow position: | chr21:5594260-5594725 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 311 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 21, 54 |
Conread position: | 56-352 |
Cow position: | chr21:21132241-21131930 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 205 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 26, 181 |
Conread position: | 115-490 |
Cow position: | chr21:8836616-8836999 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 269 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 91, 15 |
Conread position: | 115-491 |
Cow position: | chr21:22750846-22750448 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 284 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 69, 38 |
Conread position: | 115-614 |
Cow position: | chr21:38946064-38945543 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 14 |
Conread position: | 122-453 |
Cow position: | chr21:33946640-33946987 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 238 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 45, 78 |
Conread position: | 128-444 |
Cow position: | chr21:44075896-44076237 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 235 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 31, 141 |
Conread position: | 128-491 |
Cow position: | chr21:46290993-46291382 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 268 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 133-651 |
Cow position: | chr21:28258297-28258855 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 370 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 26, 31 |
Conread position: | 142-492 |
Cow position: | chr21:24647458-24647819 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 250 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 64, 8 |
Conread position: | 142-634 |
Cow position: | chr21:47375773-47376285 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 8 |
Conread position: | 142-669 |
Cow position: | chr21:4595985-4595454 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 74 |
Conread position: | 153-481 |
Cow position: | chr21:4880788-4880443 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 241 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 25, 64 |
Conread position: | 153-659 |
Cow position: | chr21:5019791-5020336 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 62 |
Conread position: | 155-632 |
Cow position: | chr21:38019878-38020390 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 337 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 32, 74 |
Conread position: | 156-481 |
Cow position: | chr21:33947882-33948213 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 229 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 22, 51 |
Conread position: | 156-486 |
Cow position: | chr21:13112744-13112393 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 244 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 22, 61 |
Conread position: | 156-486 |
Cow position: | chr21:25189290-25189641 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 248 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 23, 61 |
Conread position: | 156-486 |
Cow position: | chr21:26401118-26400767 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 250 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 22, 56 |
Conread position: | 156-490 |
Cow position: | chr21:24083700-24083355 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 244 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 39, 13 |
Conread position: | 156-490 |
Cow position: | chr21:32397402-32397048 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 242 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 156-490 |
Cow position: | chr21:34255944-34255589 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 243 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 28, 68 |
Conread position: | 156-618 |
Cow position: | chr21:27031894-27032369 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 309 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 28, 9 |
Conread position: | 156-647 |
Cow position: | chr21:33358559-33358078 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 326 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 50, 58 |
Conread position: | 156-648 |
Cow position: | chr21:1195186-1195718 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 356 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 22, 250 |
Conread position: | 156-648 |
Cow position: | chr21:33256203-33256735 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 358 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 22, 61 |
Conread position: | 156-648 |
Cow position: | chr21:42916442-42916973 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 349 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 65, 24 |
Conread position: | 156-648 |
Cow position: | chr21:44763313-44762782 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 61 |
Conread position: | 156-648 |
Cow position: | chr21:47976656-47977189 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 156-657 |
Cow position: | chr21:10852914-10853453 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 356 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 23, 61 |
Conread position: | 156-659 |
Cow position: | chr21:31251643-31252189 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 362 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 22, 9 |
Conread position: | 157-470 |
Cow position: | chr21:25779892-25779568 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 215 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 28, 244 |
Conread position: | 157-588 |
Cow position: | chr21:33662947-33663403 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 303 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 23, 50 |
Conread position: | 158-476 |
Cow position: | chr21:3805577-3805906 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 224 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 21, 54 |
Conread position: | 158-595 |
Cow position: | chr21:995778-995322 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 305 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 20, 59 |
Conread position: | 158-645 |
Cow position: | chr21:24948757-24949291 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 355 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 22, 59 |
Conread position: | 160-476 |
Cow position: | chr21:47943604-47943937 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 233 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 24, 74 |
Conread position: | 160-648 |
Cow position: | chr21:4078700-4079222 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 57 |
Conread position: | 170-475 |
Cow position: | chr21:25394338-25394019 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 218 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 8, 156 |
Conread position: | 171-487 |
Cow position: | chr21:166514-166853 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 230 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 7, 333 |
Conread position: | 176-487 |
Cow position: | chr21:49648305-49647973 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 223 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 48, 13 |
Conread position: | 176-672 |
Cow position: | chr21:3116209-3116705 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 340 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 30, 159 |
Conread position: | 177-455 |
Cow position: | chr21:41893-42182 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 200 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 49, 33 |
Conread position: | 189-645 |
Cow position: | chr21:3922944-3923441 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 332 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 32, 484 |
Conread position: | 197-467 |
Cow position: | chr21:4284891-4284610 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 196 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 9, 19 |
Conread position: | 221-492 |
Cow position: | chr21:30555369-30555094 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 200 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 126, 10 |
Conread position: | 241-648 |
Cow position: | chr21:404846-404422 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 269 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 21, 41 |
Conread position: | 253-648 |
Cow position: | chr21:28916222-28915791 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 286 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 255-490 |
Cow position: | chr21:4586947-4586701 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 174 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 30, 55 |
Conread position: | 276-578 |
Cow position: | chr21:34551101-34550788 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 216 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 68, 18 |
Conread position: | 307-490 |
Cow position: | chr21:15548097-15547909 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 133 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 11, 85 |
Conread position: | 326-483 |
Cow position: | chr21:20772298-20772463 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 134 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 433-647 |
Cow position: | chr21:31642142-31642369 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 160 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 38, 66 |
Conread position: | 523-672 |
Cow position: | chr21:20772901-20773049 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 132 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 36, 0 |
Show alignments to all cow chromosomes.