Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8020C21.3
        

               Conread position:
               1-648
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 36
               

               Conread position:
               8-586
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               391
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               124, 12
               

               Conread position:
               12-481
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               331
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               61, 34
               

               Conread position:
               19-648
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 43
               

               Conread position:
               22-481
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               326
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               7, 408
               

               Conread position:
               22-636
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               435
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               30, 210
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               438
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               7, 228
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 211
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               22-662
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               433
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               14, 193
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 384
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 53
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 273
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               426
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               10, 160
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 196
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               37-476
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               304
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               13, 428
               

               Conread position:
               40-648
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 378
               

               Conread position:
               41-648
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 191
               

               Conread position:
               49-631
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 179
               

               Conread position:
               51-432
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               275
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               22, 14
               

               Conread position:
               52-648
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               111-648
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 125
               

               Conread position:
               114-385
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 29
               

               Conread position:
               115-664
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 107
               

               Conread position:
               117-647
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               356
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               82, 58
               

               Conread position:
               134-672
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               397
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               25, 63
               

               Conread position:
               142-475
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               144-648
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               365
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               40, 7
               

               Conread position:
               148-612
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               337
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               10, 69
               

               Conread position:
               155-621
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               297
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 50
               

               Conread position:
               155-648
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 21
               

               Conread position:
               156-403
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               22, 72
               

               Conread position:
               156-476
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-476
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               28, 78
               

               Conread position:
               156-481
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 27
               

               Conread position:
               156-486
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               34, 72
               

               Conread position:
               156-491
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 76
               

               Conread position:
               156-596
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               327
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-610
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 77
               

               Conread position:
               156-616
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               308
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               156-618
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               334
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-645
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-647
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 227
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               355
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               357
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               346
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               25, 43
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 300
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               362
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               353
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               22, 56
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               356
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               22, 65
               

               Conread position:
               156-656
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 239
               

               Conread position:
               156-662
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               366
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-662
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               354
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               22, 46
               

               Conread position:
               156-663
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               368
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-672
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               363
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               28, 61
               

               Conread position:
               157-648
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 60
               

               Conread position:
               157-672
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               372
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               49, 101
               

               Conread position:
               158-487
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 252
               

               Conread position:
               158-648
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               355
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               20, 59
               

               Conread position:
               165-476
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               168-475
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               169-648
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               337
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 45
               

               Conread position:
               170-461
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               36, 102
               

               Conread position:
               174-648
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               176-475
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 87
               

               Conread position:
               176-648
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               334
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               30, 16
               

               Conread position:
               176-672
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 44
               

               Conread position:
               177-476
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               98, 29
               

               Conread position:
               178-644
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               339
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               184-598
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               296
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               52, 22
               

               Conread position:
               184-648
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               332
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               188-648
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               330
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               189-648
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               332
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               32, 490
               

               Conread position:
               189-671
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               328
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               17, 142
               

               Conread position:
               193-486
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               22, 17
               

               Conread position:
               204-659
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               327
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               227-472
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               115, 102
               

               Conread position:
               228-478
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 155
               

               Conread position:
               232-602
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 51
               

               Conread position:
               233-648
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               306
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               240-672
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               302
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               253-621
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               268
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               32, 146
               

               Conread position:
               255-486
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               26, 146
               

               Conread position:
               262-635
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               28, 158
               

               Conread position:
               276-648
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               43, 88
               

               Conread position:
               276-672
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               294
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               43, 28
               

               Conread position:
               280-490
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               291-672
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               15, 9
               

               Conread position:
               321-499
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               360-660
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               19, 87
               

               Conread position:
               384-672
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 213
               

               Conread position:
               524-671
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               75, 0
               
Show alignments to all cow chromosomes.