Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8020C21.3
        

               Conread position:
               10-445
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               302
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               19, 12
               

               Conread position:
               22-429
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               7, 212
               

               Conread position:
               22-481
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               327
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               22-662
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               26-648
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 10
               

               Conread position:
               36-476
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               304
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               37, 64
               

               Conread position:
               36-481
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               313
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               16, 195
               

               Conread position:
               36-635
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               429
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               16, 191
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               433
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               16, 200
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               423
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               37, 11
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               441
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               16, 196
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 191
               

               Conread position:
               51-648
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               427
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               22, 578
               

               Conread position:
               114-644
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               369
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               45, 5
               

               Conread position:
               128-598
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               340
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               31, 179
               

               Conread position:
               130-478
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               27, 43
               

               Conread position:
               144-444
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               154, 7
               

               Conread position:
               146-648
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 72
               

               Conread position:
               153-486
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               25, 64
               

               Conread position:
               153-490
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 104
               

               Conread position:
               155-476
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               23, 62
               

               Conread position:
               156-443
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-467
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-470
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               28, 73
               

               Conread position:
               156-481
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 65
               

               Conread position:
               156-486
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               250
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               156-492
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               50, 36
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               348
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               25, 294
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               352
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               74, 182
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               360
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               22, 38
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               358
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               351
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 158
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-659
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               352
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               22, 190
               

               Conread position:
               156-662
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               157-648
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               356
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               23, 60
               

               Conread position:
               158-648
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               352
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               20, 66
               

               Conread position:
               159-648
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               332
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 6
               

               Conread position:
               159-648
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               353
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               160-648
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               353
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               24, 105
               

               Conread position:
               164-481
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               169-476
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               169-482
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 38
               

               Conread position:
               172-475
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               173-492
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               6, 34
               

               Conread position:
               174-648
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               349
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               32, 239
               

               Conread position:
               177-476
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               30, 39
               

               Conread position:
               189-467
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               16, 81
               

               Conread position:
               189-476
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               29, 44
               

               Conread position:
               189-671
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 21
               

               Conread position:
               195-476
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               72, 15
               

               Conread position:
               200-461
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               29, 15
               

               Conread position:
               220-648
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               311
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               227-588
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               251
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               48, 283
               

               Conread position:
               227-672
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               306
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               56, 11
               

               Conread position:
               235-486
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               11, 159
               

               Conread position:
               242-427
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               244-672
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               99, 34
               

               Conread position:
               250-476
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               253-648
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               282
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               269-492
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               49, 7
               

               Conread position:
               276-492
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               44, 64
               

               Conread position:
               280-648
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               264
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               289-648
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 107
               

               Conread position:
               291-466
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               297-647
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               23, 96
               

               Conread position:
               400-660
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               524-647
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               524-659
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               75, 0
               
Show alignments to all cow chromosomes.