Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8020C21.3
        

               Conread position:
               1-598
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               22-481
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               323
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               28, 211
               

               Conread position:
               22-598
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               414
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               7, 211
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 215
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 210
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 399
               

               Conread position:
               36-634
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               36-636
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               415
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               10, 66
               

               Conread position:
               36-637
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               416
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               8, 495
               

               Conread position:
               36-645
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 632
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               412
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               16, 319
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               36-662
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               448
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 383
               

               Conread position:
               39-486
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               333
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               13, 193
               

               Conread position:
               40-648
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               424
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               53, 39
               

               Conread position:
               49-498
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               53, 149
               

               Conread position:
               114-672
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               394
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               43, 8
               

               Conread position:
               115-641
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               360
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               71, 14
               

               Conread position:
               117-480
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               30, 90
               

               Conread position:
               130-487
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               29, 174
               

               Conread position:
               130-666
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 93
               

               Conread position:
               133-476
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               25, 63
               

               Conread position:
               142-653
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               365
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               36, 10
               

               Conread position:
               142-653
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               365
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               36, 10
               

               Conread position:
               150-486
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               7, 250
               

               Conread position:
               153-443
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               25, 62
               

               Conread position:
               155-486
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               29, 250
               

               Conread position:
               155-647
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 62
               

               Conread position:
               155-648
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               365
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               23, 62
               

               Conread position:
               156-449
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 67
               

               Conread position:
               156-452
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               20, 108
               

               Conread position:
               156-467
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 78
               

               Conread position:
               156-476
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               156-478
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 242
               

               Conread position:
               156-481
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               235
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               13, 44
               

               Conread position:
               156-589
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               316
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-619
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               332
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-633
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 33
               

               Conread position:
               156-638
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               352
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               22, 204
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               353
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               22, 43
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               337
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               22, 150
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               342
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               53, 37
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               346
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               20, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               357
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               65, 28
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               355
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               342
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               348
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               157-504
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               24, 37
               

               Conread position:
               158-492
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               246
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               64, 30
               

               Conread position:
               158-632
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               337
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               63, 37
               

               Conread position:
               158-648
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               356
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               160-473
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               160-476
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               18, 77
               

               Conread position:
               160-487
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 241
               

               Conread position:
               160-622
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               312
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               20, 57
               

               Conread position:
               163-648
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               319
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               169-631
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               314
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               15, 48
               

               Conread position:
               175-492
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 42
               

               Conread position:
               176-490
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 140
               

               Conread position:
               176-648
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               342
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               30, 10
               

               Conread position:
               189-612
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 159
               

               Conread position:
               191-646
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               327
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               194-490
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 73
               

               Conread position:
               207-648
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               319
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               21, 57
               

               Conread position:
               210-598
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               273
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               28, 76
               

               Conread position:
               214-589
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 38
               

               Conread position:
               219-553
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               15, 105
               

               Conread position:
               219-621
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               43, 60
               

               Conread position:
               250-672
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               69, 15
               

               Conread position:
               253-647
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               30, 212
               

               Conread position:
               275-648
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               278-648
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               271
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               288-648
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               30, 90
               

               Conread position:
               389-660
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               128, 75
               

               Conread position:
               522-648
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               524-672
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               532-648
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               67, 0
               
Show alignments to all cow chromosomes.