Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8020C21.3
        

               Conread position:
               1-666
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               8-648
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               444
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               65, 31
               

               Conread position:
               22-481
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               326
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 449
               

               Conread position:
               36-481
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               317
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 130
               

               Conread position:
               36-486
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               325
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 190
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 69
               

               Conread position:
               56-648
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               57-648
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               389
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 163
               

               Conread position:
               114-492
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               115-672
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 129
               

               Conread position:
               117-434
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               133-477
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               150, 27
               

               Conread position:
               133-498
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               144-647
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               343
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               33, 7
               

               Conread position:
               146-647
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 241
               

               Conread position:
               153-648
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               325
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               153-648
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               323
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               22, 15
               

               Conread position:
               155-659
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 230
               

               Conread position:
               156-339
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               25, 98
               

               Conread position:
               156-472
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-477
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               28, 61
               

               Conread position:
               156-481
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               156-492
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 250
               

               Conread position:
               156-647
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 62
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               346
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 498
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               354
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               357
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               22, 66
               

               Conread position:
               156-672
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 61
               

               Conread position:
               158-661
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               342
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               14, 24
               

               Conread position:
               160-660
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               362
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               18, 57
               

               Conread position:
               169-476
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 50
               

               Conread position:
               172-647
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               71, 230
               

               Conread position:
               177-481
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               29, 39
               

               Conread position:
               177-490
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               178-646
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               323
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               29, 69
               

               Conread position:
               183-470
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               23, 213
               

               Conread position:
               183-663
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 50
               

               Conread position:
               196-476
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               242-645
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               294
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               43, 17
               

               Conread position:
               255-481
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               263-648
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               291
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               22, 137
               

               Conread position:
               286-662
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               33, 117
               

               Conread position:
               290-476
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               350-595
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               29, 46
               

               Conread position:
               350-648
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 63
               

               Conread position:
               350-671
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               366-648
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               16, 23
               

               Conread position:
               419-648
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               131, 53
               

               Conread position:
               537-657
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               62, 79
               
Show alignments to all cow chromosomes.