Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8020C21.3
        

               Conread position:
               19-648
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 196
               

               Conread position:
               22-481
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               327
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               22-644
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               443
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 149
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 15
               

               Conread position:
               22-648
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 215
               

               Conread position:
               36-481
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               317
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               36-485
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               316
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               16, 171
               

               Conread position:
               36-486
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               331
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               17, 72
               

               Conread position:
               36-492
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               328
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               16, 73
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 197
               

               Conread position:
               36-662
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               443
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               14, 200
               

               Conread position:
               40-648
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               51-662
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               52-481
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               303
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               52-648
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               424
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               121-643
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               362
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               48, 39
               

               Conread position:
               122-450
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               47, 38
               

               Conread position:
               122-475
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               37, 102
               

               Conread position:
               128-648
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 67
               

               Conread position:
               130-490
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               15, 77
               

               Conread position:
               137-475
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               69, 20
               

               Conread position:
               156-476
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               22, 9
               

               Conread position:
               156-487
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               28, 246
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 9
               

               Conread position:
               156-621
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               345
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               156-643
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               350
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               22, 97
               

               Conread position:
               156-646
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               346
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               24, 51
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 282
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               354
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               22, 64
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-662
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               348
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               22, 55
               

               Conread position:
               158-624
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               158-648
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               338
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               20, 59
               

               Conread position:
               159-481
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               165-492
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 73
               

               Conread position:
               177-648
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               333
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               29, 56
               

               Conread position:
               183-475
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 22
               

               Conread position:
               185-647
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               313
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               36, 114
               

               Conread position:
               191-448
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               198-648
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               336
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               23, 207
               

               Conread position:
               217-476
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               38, 10
               

               Conread position:
               222-442
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               228-476
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               57, 169
               

               Conread position:
               228-476
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               102, 59
               

               Conread position:
               276-665
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 47
               

               Conread position:
               280-648
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               265
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               289-490
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 107
               

               Conread position:
               292-643
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               27, 49
               

               Conread position:
               306-634
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               306-648
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               315-585
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 81
               

               Conread position:
               525-671
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               525-672
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               74, 138
               
Show alignments to all cow chromosomes.