Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8020C21.3
        

               Conread position:
               1-498
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               346
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               51, 22
               

               Conread position:
               2-490
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               336
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               37, 236
               

               Conread position:
               14-490
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               316
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               35, 79
               

               Conread position:
               36-461
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               302
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               37, 161
               

               Conread position:
               36-486
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               321
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               16, 196
               

               Conread position:
               36-492
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               319
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               10, 54
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 102
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               406
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               10, 169
               

               Conread position:
               36-648
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 133
               

               Conread position:
               49-586
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               365
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               104, 40
               

               Conread position:
               51-648
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               133-470
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 85
               

               Conread position:
               153-621
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               335
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               25, 64
               

               Conread position:
               156-470
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               22, 245
               

               Conread position:
               156-476
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               24, 45
               

               Conread position:
               156-476
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 60
               

               Conread position:
               156-476
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               53, 60
               

               Conread position:
               156-476
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-481
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-481
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-486
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               251
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               30, 61
               

               Conread position:
               156-486
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               251
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-486
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-486
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-487
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               22, 245
               

               Conread position:
               156-488
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               254
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               31, 61
               

               Conread position:
               156-490
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               28, 73
               

               Conread position:
               156-610
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               329
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               156-634
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               333
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-646
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               355
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-646
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               346
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               354
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               363
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               354
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               359
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               156-648
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               348
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               129, 54
               

               Conread position:
               156-657
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               364
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               22, 59
               

               Conread position:
               158-621
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               325
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               48, 244
               

               Conread position:
               159-435
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               168-636
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               320
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               17, 124
               

               Conread position:
               169-648
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 143
               

               Conread position:
               177-621
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               324
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               44, 97
               

               Conread position:
               177-646
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               318
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               28, 51
               

               Conread position:
               184-648
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               331
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               188-639
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               326
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               19, 28
               

               Conread position:
               189-476
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 105
               

               Conread position:
               205-491
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               16, 10
               

               Conread position:
               214-481
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               214-487
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               228-473
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               90, 65
               

               Conread position:
               232-638
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               300
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               40, 166
               

               Conread position:
               276-492
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               21, 215
               

               Conread position:
               278-490
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               12, 119
               

               Conread position:
               280-648
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 116
               

               Conread position:
               291-586
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               27, 22
               

               Conread position:
               293-648
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               350-492
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               90, 31
               

               Conread position:
               524-672
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               126, 76
               
Show alignments to all cow chromosomes.