Cow genome map

Conread name: Ss1.1-Pig3-SRG8020C21.3

Conread position: 8-476
Cow position:
Alignm length: 501
Alignm identity: 330
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 45, 21

Conread position: 17-648
Cow position:
Alignm length: 689
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 403

Conread position: 22-481
Cow position:
Alignm length: 496
Alignm identity: 324
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 7, 0

Conread position: 22-648
Cow position:
Alignm length: 679
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 22-648
Cow position:
Alignm length: 676
Alignm identity: 431
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 7, 148

Conread position: 22-648
Cow position:
Alignm length: 683
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 22-648
Cow position:
Alignm length: 684
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 248

Conread position: 22-648
Cow position:
Alignm length: 679
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 289

Conread position: 22-648
Cow position:
Alignm length: 684
Alignm identity: 441
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 7, 187

Conread position: 25-648
Cow position:
Alignm length: 678
Alignm identity: 436
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 24, 58

Conread position: 28-490
Cow position:
Alignm length: 485
Alignm identity: 312
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 135

Conread position: 36-442
Cow position:
Alignm length: 437
Alignm identity: 281
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 334

Conread position: 36-460
Cow position:
Alignm length: 453
Alignm identity: 289
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 210

Conread position: 36-481
Cow position:
Alignm length: 480
Alignm identity: 319
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 16, 0

Conread position: 36-490
Cow position:
Alignm length: 487
Alignm identity: 314
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 14, 194

Conread position: 36-490
Cow position:
Alignm length: 490
Alignm identity: 313
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 10, 253

Conread position: 36-490
Cow position:
Alignm length: 480
Alignm identity: 308
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 10, 25

Conread position: 36-634
Cow position:
Alignm length: 652
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 303

Conread position: 36-645
Cow position:
Alignm length: 660
Alignm identity: 425
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 16, 351

Conread position: 36-648
Cow position:
Alignm length: 669
Alignm identity: 432
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 12, 177

Conread position: 36-648
Cow position:
Alignm length: 667
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 213

Conread position: 36-648
Cow position:
Alignm length: 663
Alignm identity: 436
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 88

Conread position: 36-648
Cow position:
Alignm length: 660
Alignm identity: 411
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 213

Conread position: 36-648
Cow position:
Alignm length: 661
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 508

Conread position: 36-648
Cow position:
Alignm length: 672
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 195

Conread position: 36-648
Cow position:
Alignm length: 667
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 477

Conread position: 36-648
Cow position:
Alignm length: 670
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 196

Conread position: 39-594
Cow position:
Alignm length: 607
Alignm identity: 382
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 219

Conread position: 39-648
Cow position:
Alignm length: 665
Alignm identity: 428
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 13, 156

Conread position: 39-648
Cow position:
Alignm length: 660
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 197

Conread position: 39-648
Cow position:
Alignm length: 652
Alignm identity: 418
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 8, 62

Conread position: 49-534
Cow position:
Alignm length: 515
Alignm identity: 338
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 138

Conread position: 51-481
Cow position:
Alignm length: 465
Alignm identity: 310
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 22, 227

Conread position: 51-648
Cow position:
Alignm length: 635
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 179

Conread position: 85-625
Cow position:
Alignm length: 583
Alignm identity: 387
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 9, 142

Conread position: 114-648
Cow position:
Alignm length: 577
Alignm identity: 373
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 45, 5

Conread position: 114-672
Cow position:
Alignm length: 583
Alignm identity: 356
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 33, 50

Conread position: 119-471
Cow position:
Alignm length: 367
Alignm identity: 241
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 33

Conread position: 119-672
Cow position:
Alignm length: 604
Alignm identity: 396
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 183

Conread position: 128-616
Cow position:
Alignm length: 525
Alignm identity: 342
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 107

Conread position: 130-589
Cow position:
Alignm length: 501
Alignm identity: 340
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 28, 14

Conread position: 130-647
Cow position:
Alignm length: 545
Alignm identity: 355
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 45, 88

Conread position: 137-476
Cow position:
Alignm length: 366
Alignm identity: 243
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 87

Conread position: 153-648
Cow position:
Alignm length: 530
Alignm identity: 351
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 27, 64

Conread position: 155-472
Cow position:
Alignm length: 322
Alignm identity: 208
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 65

Conread position: 155-648
Cow position:
Alignm length: 532
Alignm identity: 352
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 23, 247

Conread position: 155-648
Cow position:
Alignm length: 537
Alignm identity: 361
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 23, 62

Conread position: 155-660
Cow position:
Alignm length: 539
Alignm identity: 357
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 23, 73

Conread position: 156-443
Cow position:
Alignm length: 304
Alignm identity: 204
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 98

Conread position: 156-451
Cow position:
Alignm length: 309
Alignm identity: 208
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 37

Conread position: 156-468
Cow position:
Alignm length: 321
Alignm identity: 209
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 67

Conread position: 156-476
Cow position:
Alignm length: 337
Alignm identity: 227
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 22, 34

Conread position: 156-481
Cow position:
Alignm length: 346
Alignm identity: 239
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 156-492
Cow position:
Alignm length: 354
Alignm identity: 242
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 51

Conread position: 156-492
Cow position:
Alignm length: 354
Alignm identity: 242
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 37, 51

Conread position: 156-592
Cow position:
Alignm length: 460
Alignm identity: 287
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 59

Conread position: 156-621
Cow position:
Alignm length: 502
Alignm identity: 337
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 61

Conread position: 156-629
Cow position:
Alignm length: 515
Alignm identity: 345
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 0

Conread position: 156-635
Cow position:
Alignm length: 523
Alignm identity: 348
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 61

Conread position: 156-641
Cow position:
Alignm length: 529
Alignm identity: 355
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 251

Conread position: 156-648
Cow position:
Alignm length: 532
Alignm identity: 356
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 61

Conread position: 156-648
Cow position:
Alignm length: 535
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 156-648
Cow position:
Alignm length: 534
Alignm identity: 356
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 22, 61

Conread position: 156-648
Cow position:
Alignm length: 535
Alignm identity: 354
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 156-648
Cow position:
Alignm length: 534
Alignm identity: 359
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 56

Conread position: 156-648
Cow position:
Alignm length: 536
Alignm identity: 360
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 61

Conread position: 156-648
Cow position:
Alignm length: 532
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 61

Conread position: 156-648
Cow position:
Alignm length: 534
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 156-648
Cow position:
Alignm length: 534
Alignm identity: 352
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 0

Conread position: 156-648
Cow position:
Alignm length: 531
Alignm identity: 342
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 78

Conread position: 156-648
Cow position:
Alignm length: 532
Alignm identity: 347
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 23, 63

Conread position: 156-648
Cow position:
Alignm length: 533
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 156-648
Cow position:
Alignm length: 534
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 156-648
Cow position:
Alignm length: 527
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 242

Conread position: 156-648
Cow position:
Alignm length: 533
Alignm identity: 352
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 65

Conread position: 156-648
Cow position:
Alignm length: 536
Alignm identity: 361
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 61

Conread position: 156-655
Cow position:
Alignm length: 543
Alignm identity: 366
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 61

Conread position: 156-657
Cow position:
Alignm length: 545
Alignm identity: 362
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 22, 61

Conread position: 156-658
Cow position:
Alignm length: 538
Alignm identity: 352
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 213

Conread position: 156-663
Cow position:
Alignm length: 546
Alignm identity: 351
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 65, 250

Conread position: 157-481
Cow position:
Alignm length: 340
Alignm identity: 242
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 60

Conread position: 157-647
Cow position:
Alignm length: 524
Alignm identity: 341
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 21, 50

Conread position: 158-486
Cow position:
Alignm length: 350
Alignm identity: 239
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 159-476
Cow position:
Alignm length: 337
Alignm identity: 234
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 19, 169

Conread position: 161-648
Cow position:
Alignm length: 522
Alignm identity: 349
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 121

Conread position: 168-631
Cow position:
Alignm length: 480
Alignm identity: 307
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 154

Conread position: 169-473
Cow position:
Alignm length: 313
Alignm identity: 198
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 197

Conread position: 170-648
Cow position:
Alignm length: 512
Alignm identity: 339
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 10, 37

Conread position: 171-670
Cow position:
Alignm length: 540
Alignm identity: 341
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 37, 46

Conread position: 172-448
Cow position:
Alignm length: 295
Alignm identity: 196
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 281

Conread position: 172-504
Cow position:
Alignm length: 346
Alignm identity: 223
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 44

Conread position: 176-648
Cow position:
Alignm length: 513
Alignm identity: 341
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 45, 16

Conread position: 177-648
Cow position:
Alignm length: 514
Alignm identity: 324
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 233

Conread position: 177-648
Cow position:
Alignm length: 520
Alignm identity: 352
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 39

Conread position: 177-648
Cow position:
Alignm length: 512
Alignm identity: 341
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 0

Conread position: 189-486
Cow position:
Alignm length: 316
Alignm identity: 223
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 17, 27

Conread position: 189-492
Cow position:
Alignm length: 314
Alignm identity: 211
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 38

Conread position: 189-647
Cow position:
Alignm length: 491
Alignm identity: 314
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 27

Conread position: 189-661
Cow position:
Alignm length: 502
Alignm identity: 341
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 17, 205

Conread position: 193-648
Cow position:
Alignm length: 493
Alignm identity: 326
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 25, 40

Conread position: 193-648
Cow position:
Alignm length: 495
Alignm identity: 332
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 28, 11

Conread position: 193-648
Cow position:
Alignm length: 483
Alignm identity: 311
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 23

Conread position: 197-648
Cow position:
Alignm length: 494
Alignm identity: 332
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 19

Conread position: 202-672
Cow position:
Alignm length: 507
Alignm identity: 327
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 7, 404

Conread position: 204-647
Cow position:
Alignm length: 489
Alignm identity: 327
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 11

Conread position: 219-621
Cow position:
Alignm length: 439
Alignm identity: 289
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 220-648
Cow position:
Alignm length: 468
Alignm identity: 308
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 10, 0

Conread position: 227-470
Cow position:
Alignm length: 253
Alignm identity: 173
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 47, 109

Conread position: 227-660
Cow position:
Alignm length: 441
Alignm identity: 270
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 157, 12

Conread position: 233-490
Cow position:
Alignm length: 268
Alignm identity: 182
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 19

Conread position: 235-648
Cow position:
Alignm length: 448
Alignm identity: 303
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 243-648
Cow position:
Alignm length: 442
Alignm identity: 294
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 244-648
Cow position:
Alignm length: 437
Alignm identity: 287
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 39, 72

Conread position: 253-648
Cow position:
Alignm length: 432
Alignm identity: 289
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 253-648
Cow position:
Alignm length: 433
Alignm identity: 289
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 28, 85

Conread position: 280-476
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 116

Conread position: 285-473
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 94, 5

Conread position: 286-648
Cow position:
Alignm length: 394
Alignm identity: 262
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 289-648
Cow position:
Alignm length: 390
Alignm identity: 259
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 291-648
Cow position:
Alignm length: 381
Alignm identity: 261
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 28, 71

Conread position: 297-486
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 333-648
Cow position:
Alignm length: 325
Alignm identity: 213
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 8, 51

Conread position: 350-648
Cow position:
Alignm length: 304
Alignm identity: 196
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 125, 31

Conread position: 362-636
Cow position:
Alignm length: 279
Alignm identity: 197
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 94, 115

Conread position: 399-648
Cow position:
Alignm length: 253
Alignm identity: 172
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 79, 106

Show alignments to all cow chromosomes.