Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8020C21.3 |
| Conread position: | 10-492 |
| Cow position: | chr5:52612229-52611727 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 340 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 10, 90 |
| Conread position: | 15-490 |
| Cow position: | chr5:47080436-47080930 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 337 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 22-442 |
| Cow position: | chr5:50390950-50390510 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 293 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 7, 70 |
| Conread position: | 22-481 |
| Cow position: | chr5:71622146-71621651 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 327 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-648 |
| Cow position: | chr5:444678-445353 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 443 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 7, 215 |
| Conread position: | 22-648 |
| Cow position: | chr5:5105382-5106061 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-648 |
| Cow position: | chr5:18120319-18119642 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 300 |
| Conread position: | 22-648 |
| Cow position: | chr5:23958170-23957490 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 446 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 7, 205 |
| Conread position: | 22-648 |
| Cow position: | chr5:26077046-26076365 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 480 |
| Conread position: | 22-648 |
| Cow position: | chr5:42506916-42507595 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 432 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 7, 228 |
| Conread position: | 22-648 |
| Cow position: | chr5:54928757-54928083 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 364 |
| Conread position: | 22-648 |
| Cow position: | chr5:59145527-59146213 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 68 |
| Conread position: | 23-492 |
| Cow position: | chr5:68590887-68591362 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 315 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 27, 209 |
| Conread position: | 36-490 |
| Cow position: | chr5:7583822-7583350 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 322 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 10, 109 |
| Conread position: | 36-648 |
| Cow position: | chr5:5925792-5925123 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 433 |
| Conread position: | 36-648 |
| Cow position: | chr5:6586289-6585624 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 36-648 |
| Cow position: | chr5:10514105-10513437 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 36-648 |
| Cow position: | chr5:14544133-14543464 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 437 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 16, 197 |
| Conread position: | 36-648 |
| Cow position: | chr5:38661502-38662168 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 72 |
| Conread position: | 36-648 |
| Cow position: | chr5:44710211-44709546 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 196 |
| Conread position: | 36-648 |
| Cow position: | chr5:59278315-59278977 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 109 |
| Conread position: | 39-490 |
| Cow position: | chr5:40348107-40347624 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 324 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 11, 60 |
| Conread position: | 39-648 |
| Cow position: | chr5:25929514-25928862 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 192 |
| Conread position: | 49-481 |
| Cow position: | chr5:58142054-58141594 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 49-490 |
| Cow position: | chr5:23667968-23667493 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 303 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 49-643 |
| Cow position: | chr5:74035717-74036349 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 420 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 24, 245 |
| Conread position: | 49-647 |
| Cow position: | chr5:57123705-57124337 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 87 |
| Conread position: | 51-671 |
| Cow position: | chr5:46003452-46002786 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 432 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 177 |
| Conread position: | 53-469 |
| Cow position: | chr5:51860730-51860314 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 46, 19 |
| Conread position: | 115-636 |
| Cow position: | chr5:29673526-29674062 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 27 |
| Conread position: | 117-477 |
| Cow position: | chr5:11957207-11956842 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 39, 106 |
| Conread position: | 117-490 |
| Cow position: | chr5:28948481-28948086 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 119-648 |
| Cow position: | chr5:49756058-49755491 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 375 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 122-639 |
| Cow position: | chr5:51768535-51767995 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 352 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 51, 38 |
| Conread position: | 122-671 |
| Cow position: | chr5:13701369-13701933 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 378 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 37, 73 |
| Conread position: | 128-461 |
| Cow position: | chr5:55833574-55833220 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 31, 145 |
| Conread position: | 130-352 |
| Cow position: | chr5:34616995-34616763 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 140 |
| Conread position: | 130-476 |
| Cow position: | chr5:39392784-39392427 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 130-576 |
| Cow position: | chr5:50605063-50604593 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 309 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 130-621 |
| Cow position: | chr5:47470660-47471189 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 361 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 133-655 |
| Cow position: | chr5:25232871-25232302 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 366 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 473 |
| Conread position: | 153-461 |
| Cow position: | chr5:30361133-30360822 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 31, 61 |
| Conread position: | 156-476 |
| Cow position: | chr5:12680291-12679947 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 156-476 |
| Cow position: | chr5:37423460-37423796 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-476 |
| Cow position: | chr5:46735976-46735637 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 24, 61 |
| Conread position: | 156-476 |
| Cow position: | chr5:59083921-59083582 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 250 |
| Conread position: | 156-476 |
| Cow position: | chr5:73486617-73486280 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 22, 177 |
| Conread position: | 156-478 |
| Cow position: | chr5:73443720-73444048 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 60 |
| Conread position: | 156-479 |
| Cow position: | chr5:47342027-47342359 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 156-480 |
| Cow position: | chr5:63389276-63388927 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 173 |
| Conread position: | 156-481 |
| Cow position: | chr5:4016577-4016233 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 156-483 |
| Cow position: | chr5:27550155-27549808 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-486 |
| Cow position: | chr5:18249364-18249713 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 249 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 22, 153 |
| Conread position: | 156-486 |
| Cow position: | chr5:23353049-23353401 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 259 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-492 |
| Cow position: | chr5:21786390-21786038 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 28, 106 |
| Conread position: | 156-634 |
| Cow position: | chr5:37734677-37735198 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 349 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-638 |
| Cow position: | chr5:26100023-26100540 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 344 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 16, 21 |
| Conread position: | 156-648 |
| Cow position: | chr5:444006-443473 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 355 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 22, 44 |
| Conread position: | 156-648 |
| Cow position: | chr5:3501820-3501292 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr5:4435197-4434668 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 141 |
| Conread position: | 156-648 |
| Cow position: | chr5:4964069-4963544 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 350 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 22, 121 |
| Conread position: | 156-648 |
| Cow position: | chr5:7276137-7276670 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 358 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 249 |
| Conread position: | 156-648 |
| Cow position: | chr5:24100954-24101486 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr5:27177950-27178488 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 355 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 28, 251 |
| Conread position: | 156-648 |
| Cow position: | chr5:29743249-29742721 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 359 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr5:32756136-32755608 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 347 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 22, 60 |
| Conread position: | 156-648 |
| Cow position: | chr5:32953631-32954163 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 352 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 115 |
| Conread position: | 156-648 |
| Cow position: | chr5:45180789-45180252 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 359 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 22, 249 |
| Conread position: | 156-648 |
| Cow position: | chr5:48806146-48805614 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr5:50688116-50688649 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-648 |
| Cow position: | chr5:51167003-51166472 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 492 |
| Conread position: | 156-648 |
| Cow position: | chr5:51745531-51746059 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 347 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 156-648 |
| Cow position: | chr5:54786804-54786272 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 360 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 156-648 |
| Cow position: | chr5:57337105-57336577 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 352 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 156-648 |
| Cow position: | chr5:58198327-58198846 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 353 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 156-656 |
| Cow position: | chr5:32165594-32165073 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 351 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 156-662 |
| Cow position: | chr5:30156662-30157214 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 366 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-668 |
| Cow position: | chr5:10097737-10097199 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 351 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 158-622 |
| Cow position: | chr5:32775121-32775623 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 340 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 158-648 |
| Cow position: | chr5:49118036-49117516 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 345 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 165-672 |
| Cow position: | chr5:54695481-54694937 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 97 |
| Conread position: | 166-486 |
| Cow position: | chr5:8177421-8177763 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 52 |
| Conread position: | 168-648 |
| Cow position: | chr5:29633744-29634265 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 348 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 169-476 |
| Cow position: | chr5:28222909-28222586 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 48 |
| Conread position: | 177-476 |
| Cow position: | chr5:14632071-14631756 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 44, 38 |
| Conread position: | 177-648 |
| Cow position: | chr5:49222169-49221656 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 345 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 29, 42 |
| Conread position: | 178-473 |
| Cow position: | chr5:34525025-34524716 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 178-490 |
| Cow position: | chr5:12502837-12502516 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 62, 251 |
| Conread position: | 184-481 |
| Cow position: | chr5:56785882-56786198 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 189-492 |
| Cow position: | chr5:23530068-23529755 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 17, 289 |
| Conread position: | 192-648 |
| Cow position: | chr5:26057474-26057967 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 324 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 30, 131 |
| Conread position: | 195-648 |
| Cow position: | chr5:37610598-37610106 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 322 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 195-648 |
| Cow position: | chr5:52823863-52823370 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 331 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 198-446 |
| Cow position: | chr5:52830449-52830184 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 8, 18 |
| Conread position: | 199-492 |
| Cow position: | chr5:57969178-57969482 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 188 |
| Conread position: | 201-648 |
| Cow position: | chr5:10773753-10773269 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 316 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 113 |
| Conread position: | 205-481 |
| Cow position: | chr5:68338137-68337846 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 207-476 |
| Cow position: | chr5:55676251-55676530 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 28 |
| Conread position: | 207-492 |
| Cow position: | chr5:15204088-15203802 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 8 |
| Conread position: | 215-492 |
| Cow position: | chr5:57364396-57364120 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 101, 68 |
| Conread position: | 220-672 |
| Cow position: | chr5:57614800-57614327 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 318 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 14, 126 |
| Conread position: | 229-672 |
| Cow position: | chr5:66981567-66981997 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 236-648 |
| Cow position: | chr5:7395647-7396085 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 301 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 49, 164 |
| Conread position: | 238-648 |
| Cow position: | chr5:25022286-25022718 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 112 |
| Conread position: | 239-492 |
| Cow position: | chr5:33281829-33281568 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 109 |
| Conread position: | 241-590 |
| Cow position: | chr5:6842720-6842383 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 91, 11 |
| Conread position: | 250-492 |
| Cow position: | chr5:28570998-28571254 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 256-621 |
| Cow position: | chr5:26512249-26511848 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 259-648 |
| Cow position: | chr5:413283-412873 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 88, 6 |
| Conread position: | 265-648 |
| Cow position: | chr5:41066442-41066861 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 276-476 |
| Cow position: | chr5:14342690-14342487 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 129 |
| Conread position: | 277-492 |
| Cow position: | chr5:16910642-16910429 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 71, 12 |
| Conread position: | 279-647 |
| Cow position: | chr5:70127232-70127615 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 68, 43 |
| Conread position: | 280-648 |
| Cow position: | chr5:59063882-59064281 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 282-648 |
| Cow position: | chr5:6772007-6772404 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 289-648 |
| Cow position: | chr5:34525859-34526234 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 102 |
| Conread position: | 293-672 |
| Cow position: | chr5:47740517-47740908 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 305-492 |
| Cow position: | chr5:70617362-70617555 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 6, 122 |
| Conread position: | 350-492 |
| Cow position: | chr5:21920033-21920174 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 362-659 |
| Cow position: | chr5:39245757-39245439 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 409-672 |
| Cow position: | chr5:32089214-32088930 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 524-666 |
| Cow position: | chr5:37424437-37424584 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.