Cow genome map

Conread name: Ss1.1-Pig3-SRG8020C21.3

Conread position: 10-492
Cow position:
Alignm length: 515
Alignm identity: 340
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 10, 90

Conread position: 15-490
Cow position:
Alignm length: 504
Alignm identity: 337
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 33, 14

Conread position: 22-442
Cow position:
Alignm length: 446
Alignm identity: 293
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 7, 70

Conread position: 22-481
Cow position:
Alignm length: 496
Alignm identity: 327
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 7, 0

Conread position: 22-648
Cow position:
Alignm length: 682
Alignm identity: 443
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 7, 215

Conread position: 22-648
Cow position:
Alignm length: 680
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 22-648
Cow position:
Alignm length: 679
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 300

Conread position: 22-648
Cow position:
Alignm length: 684
Alignm identity: 446
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 205

Conread position: 22-648
Cow position:
Alignm length: 684
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 480

Conread position: 22-648
Cow position:
Alignm length: 681
Alignm identity: 432
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 7, 228

Conread position: 22-648
Cow position:
Alignm length: 676
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 364

Conread position: 22-648
Cow position:
Alignm length: 688
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 68

Conread position: 23-492
Cow position:
Alignm length: 491
Alignm identity: 315
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 27, 209

Conread position: 36-490
Cow position:
Alignm length: 482
Alignm identity: 322
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 109

Conread position: 36-648
Cow position:
Alignm length: 671
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 433

Conread position: 36-648
Cow position:
Alignm length: 666
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 36-648
Cow position:
Alignm length: 669
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 36-648
Cow position:
Alignm length: 672
Alignm identity: 437
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 16, 197

Conread position: 36-648
Cow position:
Alignm length: 668
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 72

Conread position: 36-648
Cow position:
Alignm length: 671
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 196

Conread position: 36-648
Cow position:
Alignm length: 665
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 109

Conread position: 39-490
Cow position:
Alignm length: 488
Alignm identity: 324
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 11, 60

Conread position: 39-648
Cow position:
Alignm length: 658
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 192

Conread position: 49-481
Cow position:
Alignm length: 464
Alignm identity: 306
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 37

Conread position: 49-490
Cow position:
Alignm length: 476
Alignm identity: 303
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 49-643
Cow position:
Alignm length: 645
Alignm identity: 420
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 24, 245

Conread position: 49-647
Cow position:
Alignm length: 638
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 87

Conread position: 51-671
Cow position:
Alignm length: 671
Alignm identity: 432
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 22, 177

Conread position: 53-469
Cow position:
Alignm length: 431
Alignm identity: 291
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 46, 19

Conread position: 115-636
Cow position:
Alignm length: 553
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 27

Conread position: 117-477
Cow position:
Alignm length: 377
Alignm identity: 256
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 106

Conread position: 117-490
Cow position:
Alignm length: 399
Alignm identity: 268
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 13, 80

Conread position: 119-648
Cow position:
Alignm length: 574
Alignm identity: 375
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 40, 11

Conread position: 122-639
Cow position:
Alignm length: 552
Alignm identity: 352
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 51, 38

Conread position: 122-671
Cow position:
Alignm length: 582
Alignm identity: 378
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 37, 73

Conread position: 128-461
Cow position:
Alignm length: 356
Alignm identity: 246
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 31, 145

Conread position: 130-352
Cow position:
Alignm length: 235
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 140

Conread position: 130-476
Cow position:
Alignm length: 364
Alignm identity: 249
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 27, 101

Conread position: 130-576
Cow position:
Alignm length: 479
Alignm identity: 309
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 75

Conread position: 130-621
Cow position:
Alignm length: 536
Alignm identity: 361
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 39, 30

Conread position: 133-655
Cow position:
Alignm length: 571
Alignm identity: 366
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 473

Conread position: 153-461
Cow position:
Alignm length: 320
Alignm identity: 221
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 31, 61

Conread position: 156-476
Cow position:
Alignm length: 345
Alignm identity: 235
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 156-476
Cow position:
Alignm length: 343
Alignm identity: 230
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 61

Conread position: 156-476
Cow position:
Alignm length: 342
Alignm identity: 238
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 24, 61

Conread position: 156-476
Cow position:
Alignm length: 341
Alignm identity: 226
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 250

Conread position: 156-476
Cow position:
Alignm length: 340
Alignm identity: 233
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 177

Conread position: 156-478
Cow position:
Alignm length: 334
Alignm identity: 219
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 60

Conread position: 156-479
Cow position:
Alignm length: 340
Alignm identity: 239
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 59

Conread position: 156-480
Cow position:
Alignm length: 351
Alignm identity: 232
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 173

Conread position: 156-481
Cow position:
Alignm length: 346
Alignm identity: 238
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 22, 55

Conread position: 156-483
Cow position:
Alignm length: 348
Alignm identity: 231
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 156-486
Cow position:
Alignm length: 352
Alignm identity: 249
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 22, 153

Conread position: 156-486
Cow position:
Alignm length: 356
Alignm identity: 259
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 22, 61

Conread position: 156-492
Cow position:
Alignm length: 357
Alignm identity: 242
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 28, 106

Conread position: 156-634
Cow position:
Alignm length: 524
Alignm identity: 349
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 61

Conread position: 156-638
Cow position:
Alignm length: 520
Alignm identity: 344
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 16, 21

Conread position: 156-648
Cow position:
Alignm length: 535
Alignm identity: 355
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 22, 44

Conread position: 156-648
Cow position:
Alignm length: 534
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 61

Conread position: 156-648
Cow position:
Alignm length: 531
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 141

Conread position: 156-648
Cow position:
Alignm length: 533
Alignm identity: 350
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 22, 121

Conread position: 156-648
Cow position:
Alignm length: 535
Alignm identity: 358
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 249

Conread position: 156-648
Cow position:
Alignm length: 534
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 61

Conread position: 156-648
Cow position:
Alignm length: 540
Alignm identity: 355
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 28, 251

Conread position: 156-648
Cow position:
Alignm length: 536
Alignm identity: 359
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 61

Conread position: 156-648
Cow position:
Alignm length: 533
Alignm identity: 347
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 60

Conread position: 156-648
Cow position:
Alignm length: 535
Alignm identity: 352
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 115

Conread position: 156-648
Cow position:
Alignm length: 539
Alignm identity: 359
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 22, 249

Conread position: 156-648
Cow position:
Alignm length: 536
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 61

Conread position: 156-648
Cow position:
Alignm length: 534
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 156-648
Cow position:
Alignm length: 533
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 492

Conread position: 156-648
Cow position:
Alignm length: 531
Alignm identity: 347
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 63

Conread position: 156-648
Cow position:
Alignm length: 536
Alignm identity: 360
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 29, 61

Conread position: 156-648
Cow position:
Alignm length: 531
Alignm identity: 352
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 50, 77

Conread position: 156-648
Cow position:
Alignm length: 530
Alignm identity: 353
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 22, 71

Conread position: 156-656
Cow position:
Alignm length: 532
Alignm identity: 351
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 33

Conread position: 156-662
Cow position:
Alignm length: 553
Alignm identity: 366
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 22, 0

Conread position: 156-668
Cow position:
Alignm length: 548
Alignm identity: 351
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 45

Conread position: 158-622
Cow position:
Alignm length: 505
Alignm identity: 340
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 63, 16

Conread position: 158-648
Cow position:
Alignm length: 527
Alignm identity: 345
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 20, 59

Conread position: 165-672
Cow position:
Alignm length: 546
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 97

Conread position: 166-486
Cow position:
Alignm length: 345
Alignm identity: 239
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 52

Conread position: 168-648
Cow position:
Alignm length: 522
Alignm identity: 348
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 169-476
Cow position:
Alignm length: 328
Alignm identity: 219
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 48

Conread position: 177-476
Cow position:
Alignm length: 318
Alignm identity: 209
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 38

Conread position: 177-648
Cow position:
Alignm length: 515
Alignm identity: 345
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 29, 42

Conread position: 178-473
Cow position:
Alignm length: 311
Alignm identity: 218
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 28, 38

Conread position: 178-490
Cow position:
Alignm length: 324
Alignm identity: 221
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 62, 251

Conread position: 184-481
Cow position:
Alignm length: 317
Alignm identity: 214
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 189-492
Cow position:
Alignm length: 315
Alignm identity: 210
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 289

Conread position: 192-648
Cow position:
Alignm length: 498
Alignm identity: 324
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 131

Conread position: 195-648
Cow position:
Alignm length: 493
Alignm identity: 322
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 26, 0

Conread position: 195-648
Cow position:
Alignm length: 494
Alignm identity: 331
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 26, 0

Conread position: 198-446
Cow position:
Alignm length: 269
Alignm identity: 191
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 8, 18

Conread position: 199-492
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 7, 188

Conread position: 201-648
Cow position:
Alignm length: 489
Alignm identity: 316
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 113

Conread position: 205-481
Cow position:
Alignm length: 292
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 207-476
Cow position:
Alignm length: 283
Alignm identity: 188
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 28

Conread position: 207-492
Cow position:
Alignm length: 292
Alignm identity: 188
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 8

Conread position: 215-492
Cow position:
Alignm length: 283
Alignm identity: 198
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 101, 68

Conread position: 220-672
Cow position:
Alignm length: 479
Alignm identity: 318
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 126

Conread position: 229-672
Cow position:
Alignm length: 456
Alignm identity: 290
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 57

Conread position: 236-648
Cow position:
Alignm length: 443
Alignm identity: 301
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 49, 164

Conread position: 238-648
Cow position:
Alignm length: 442
Alignm identity: 294
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 112

Conread position: 239-492
Cow position:
Alignm length: 266
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 109

Conread position: 241-590
Cow position:
Alignm length: 357
Alignm identity: 238
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 91, 11

Conread position: 250-492
Cow position:
Alignm length: 257
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 256-621
Cow position:
Alignm length: 402
Alignm identity: 270
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 259-648
Cow position:
Alignm length: 415
Alignm identity: 271
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 88, 6

Conread position: 265-648
Cow position:
Alignm length: 420
Alignm identity: 285
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 276-476
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 129

Conread position: 277-492
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 71, 12

Conread position: 279-647
Cow position:
Alignm length: 389
Alignm identity: 258
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 68, 43

Conread position: 280-648
Cow position:
Alignm length: 400
Alignm identity: 268
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 282-648
Cow position:
Alignm length: 398
Alignm identity: 267
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 289-648
Cow position:
Alignm length: 382
Alignm identity: 252
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 102

Conread position: 293-672
Cow position:
Alignm length: 397
Alignm identity: 259
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 27, 14

Conread position: 305-492
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 6, 122

Conread position: 350-492
Cow position:
Alignm length: 143
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 362-659
Cow position:
Alignm length: 319
Alignm identity: 215
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 409-672
Cow position:
Alignm length: 285
Alignm identity: 191
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 524-666
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 0

Show alignments to all cow chromosomes.