Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8020C21.3 |
| Conread position: | 11-442 |
| Cow position: | chr6:39349674-39350140 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 305 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 19-648 |
| Cow position: | chr6:34128752-34129432 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 442 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 10, 209 |
| Conread position: | 22-456 |
| Cow position: | chr6:25216598-25217060 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 309 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 7, 208 |
| Conread position: | 22-481 |
| Cow position: | chr6:13979055-13979550 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 327 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 7, 211 |
| Conread position: | 22-481 |
| Cow position: | chr6:18513850-18514324 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 311 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 7, 137 |
| Conread position: | 22-481 |
| Cow position: | chr6:28186541-28186046 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 328 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-481 |
| Cow position: | chr6:28702413-28701925 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 320 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 7, 207 |
| Conread position: | 22-481 |
| Cow position: | chr6:46296567-46297060 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 326 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 7, 15 |
| Conread position: | 22-620 |
| Cow position: | chr6:28400952-28400304 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 421 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 7, 213 |
| Conread position: | 22-645 |
| Cow position: | chr6:27152148-27151469 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 218 |
| Conread position: | 22-648 |
| Cow position: | chr6:14133450-14132768 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-648 |
| Cow position: | chr6:20351797-20351114 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-648 |
| Cow position: | chr6:37386877-37387553 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 433 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-648 |
| Cow position: | chr6:40277367-40278034 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 427 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 7, 212 |
| Conread position: | 22-648 |
| Cow position: | chr6:43620024-43620706 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-648 |
| Cow position: | chr6:60378455-60379138 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-648 |
| Cow position: | chr6:62577889-62577207 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 444 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 7, 447 |
| Conread position: | 22-648 |
| Cow position: | chr6:68029472-68030154 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 404 |
| Conread position: | 22-662 |
| Cow position: | chr6:1508209-1507517 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 183 |
| Conread position: | 22-666 |
| Cow position: | chr6:40159212-40158518 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 213 |
| Conread position: | 36-434 |
| Cow position: | chr6:25375784-25375352 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 289 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 36-442 |
| Cow position: | chr6:5750242-5750679 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 36-455 |
| Cow position: | chr6:59595566-59596009 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 286 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 14, 375 |
| Conread position: | 36-476 |
| Cow position: | chr6:15278245-15277767 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 324 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 16, 72 |
| Conread position: | 36-481 |
| Cow position: | chr6:35874401-35873926 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 327 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 195 |
| Conread position: | 36-490 |
| Cow position: | chr6:18913167-18912678 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 321 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 36-596 |
| Cow position: | chr6:50112413-50112996 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 385 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 24 |
| Conread position: | 36-625 |
| Cow position: | chr6:1796356-1795716 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 200 |
| Conread position: | 36-634 |
| Cow position: | chr6:3486087-3485437 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 422 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 16, 200 |
| Conread position: | 36-645 |
| Cow position: | chr6:11870620-11869960 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 437 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 16, 200 |
| Conread position: | 36-647 |
| Cow position: | chr6:50570511-50571161 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 193 |
| Conread position: | 36-648 |
| Cow position: | chr6:2377011-2377679 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 36-648 |
| Cow position: | chr6:5947469-5946801 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 440 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 16, 197 |
| Conread position: | 36-648 |
| Cow position: | chr6:7139024-7138365 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 213 |
| Conread position: | 36-648 |
| Cow position: | chr6:10043526-10044190 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 200 |
| Conread position: | 36-648 |
| Cow position: | chr6:12664006-12663340 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 308 |
| Conread position: | 36-648 |
| Cow position: | chr6:13309075-13308410 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 201 |
| Conread position: | 36-648 |
| Cow position: | chr6:14927771-14928434 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 36-648 |
| Cow position: | chr6:17595978-17595310 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 36-648 |
| Cow position: | chr6:25791388-25790724 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 193 |
| Conread position: | 36-648 |
| Cow position: | chr6:28064305-28064966 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 154 |
| Conread position: | 36-648 |
| Cow position: | chr6:39911635-39912300 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 36-648 |
| Cow position: | chr6:51149249-51149917 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 36-648 |
| Cow position: | chr6:64718630-64719293 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 430 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 16, 307 |
| Conread position: | 36-662 |
| Cow position: | chr6:33465277-33465953 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 444 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 16, 51 |
| Conread position: | 40-648 |
| Cow position: | chr6:11018972-11019632 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 196 |
| Conread position: | 41-481 |
| Cow position: | chr6:41390139-41389665 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 314 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 32, 378 |
| Conread position: | 49-645 |
| Cow position: | chr6:66189447-66188828 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 402 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 42, 91 |
| Conread position: | 49-672 |
| Cow position: | chr6:66746699-66747357 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 430 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 311 |
| Conread position: | 49-672 |
| Cow position: | chr6:67266590-67267269 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 440 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 24, 311 |
| Conread position: | 51-473 |
| Cow position: | chr6:44018504-44018050 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 315 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 22, 169 |
| Conread position: | 51-657 |
| Cow position: | chr6:49249-48588 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 434 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 22, 180 |
| Conread position: | 52-469 |
| Cow position: | chr6:43104595-43104171 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 280 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 80, 37 |
| Conread position: | 106-492 |
| Cow position: | chr6:27941123-27941523 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 51, 280 |
| Conread position: | 113-480 |
| Cow position: | chr6:65936247-65935863 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 9 |
| Conread position: | 114-672 |
| Cow position: | chr6:43330988-43330415 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 388 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 64, 5 |
| Conread position: | 116-671 |
| Cow position: | chr6:17353921-17353314 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 390 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 162 |
| Conread position: | 117-672 |
| Cow position: | chr6:237458-236872 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 382 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 89, 51 |
| Conread position: | 129-490 |
| Cow position: | chr6:19329520-19329147 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 77, 16 |
| Conread position: | 133-648 |
| Cow position: | chr6:37385568-37386127 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 325 |
| Conread position: | 133-648 |
| Cow position: | chr6:50636707-50637262 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 361 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 45, 323 |
| Conread position: | 142-477 |
| Cow position: | chr6:31951109-31951456 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 18, 83 |
| Conread position: | 142-498 |
| Cow position: | chr6:32488481-32488119 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 142-648 |
| Cow position: | chr6:43798466-43797937 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 357 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 80, 14 |
| Conread position: | 142-672 |
| Cow position: | chr6:9757194-9756615 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 381 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 17, 319 |
| Conread position: | 145-648 |
| Cow position: | chr6:51867430-51867970 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 75 |
| Conread position: | 153-476 |
| Cow position: | chr6:183103-182762 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 64 |
| Conread position: | 153-476 |
| Cow position: | chr6:40318026-40318372 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 25, 40 |
| Conread position: | 153-645 |
| Cow position: | chr6:16767395-16766868 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 344 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 251 |
| Conread position: | 153-648 |
| Cow position: | chr6:916484-917018 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 64 |
| Conread position: | 153-648 |
| Cow position: | chr6:28845692-28845166 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 198 |
| Conread position: | 153-648 |
| Cow position: | chr6:35723853-35724370 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 123 |
| Conread position: | 153-657 |
| Cow position: | chr6:1275554-1275005 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 357 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 25, 64 |
| Conread position: | 155-476 |
| Cow position: | chr6:18986461-18986797 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 23, 62 |
| Conread position: | 156-460 |
| Cow position: | chr6:1097416-1097098 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 221 |
| Conread position: | 156-461 |
| Cow position: | chr6:38612096-38611788 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 23, 45 |
| Conread position: | 156-468 |
| Cow position: | chr6:47615463-47615139 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 156-475 |
| Cow position: | chr6:61160640-61160983 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 21, 273 |
| Conread position: | 156-476 |
| Cow position: | chr6:1053971-1053649 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 156-476 |
| Cow position: | chr6:6439251-6439584 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 58 |
| Conread position: | 156-476 |
| Cow position: | chr6:12628361-12628683 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 22, 118 |
| Conread position: | 156-476 |
| Cow position: | chr6:38274014-38274355 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 300 |
| Conread position: | 156-477 |
| Cow position: | chr6:29479437-29479779 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 22, 114 |
| Conread position: | 156-481 |
| Cow position: | chr6:26325984-26325639 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-481 |
| Cow position: | chr6:28001939-28001593 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-481 |
| Cow position: | chr6:31813555-31813210 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-486 |
| Cow position: | chr6:8204621-8204973 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 156-487 |
| Cow position: | chr6:62488047-62487698 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 156-490 |
| Cow position: | chr6:16595454-16595798 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 27, 55 |
| Conread position: | 156-490 |
| Cow position: | chr6:60168107-60167756 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 250 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 156-492 |
| Cow position: | chr6:9264883-9264539 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 50, 16 |
| Conread position: | 156-586 |
| Cow position: | chr6:34274357-34273902 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 60 |
| Conread position: | 156-605 |
| Cow position: | chr6:27527544-27527057 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 335 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-634 |
| Cow position: | chr6:3151671-3152179 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 342 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr6:328917-328385 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-648 |
| Cow position: | chr6:477990-478525 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 360 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr6:7192110-7191586 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 342 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 156-648 |
| Cow position: | chr6:12971475-12970942 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-648 |
| Cow position: | chr6:13849519-13850047 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 349 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-648 |
| Cow position: | chr6:15138724-15138193 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 361 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr6:19104467-19103933 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-648 |
| Cow position: | chr6:24241733-24242266 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 156-648 |
| Cow position: | chr6:36530729-36531256 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr6:39332086-39331556 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 356 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr6:45590991-45591523 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 354 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-648 |
| Cow position: | chr6:51732524-51733057 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 156-648 |
| Cow position: | chr6:55238137-55238671 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-648 |
| Cow position: | chr6:55539827-55539295 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr6:60875740-60876275 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 358 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr6:62664218-62664750 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 353 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-648 |
| Cow position: | chr6:65820140-65819605 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-655 |
| Cow position: | chr6:15179655-15180169 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 338 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 65, 171 |
| Conread position: | 157-621 |
| Cow position: | chr6:2580863-2581360 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 327 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 157-634 |
| Cow position: | chr6:16592416-16592926 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 347 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 157-662 |
| Cow position: | chr6:41414868-41414354 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 345 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 30, 299 |
| Conread position: | 158-647 |
| Cow position: | chr6:41676384-41676908 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 346 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 26, 59 |
| Conread position: | 163-610 |
| Cow position: | chr6:67212323-67211844 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 324 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 15, 211 |
| Conread position: | 167-461 |
| Cow position: | chr6:66838566-66838877 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 37, 257 |
| Conread position: | 169-648 |
| Cow position: | chr6:22931399-22930912 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 321 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 9, 48 |
| Conread position: | 170-648 |
| Cow position: | chr6:32417979-32418480 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 334 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 58, 112 |
| Conread position: | 174-648 |
| Cow position: | chr6:15480063-15480552 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 332 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 32, 42 |
| Conread position: | 176-648 |
| Cow position: | chr6:28489102-28488593 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 343 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 176-648 |
| Cow position: | chr6:47040735-47040234 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 332 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 29, 35 |
| Conread position: | 177-476 |
| Cow position: | chr6:14264296-14264617 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 96 |
| Conread position: | 177-476 |
| Cow position: | chr6:28135399-28135715 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 177-481 |
| Cow position: | chr6:13367547-13367866 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 56 |
| Conread position: | 177-481 |
| Cow position: | chr6:58390870-58390551 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 177-648 |
| Cow position: | chr6:2876567-2876056 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 177-648 |
| Cow position: | chr6:6159138-6159631 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 331 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 29, 110 |
| Conread position: | 177-648 |
| Cow position: | chr6:59618530-59619049 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 177-670 |
| Cow position: | chr6:15925103-15924589 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 348 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 177-672 |
| Cow position: | chr6:7759754-7759240 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 351 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 29, 38 |
| Conread position: | 184-598 |
| Cow position: | chr6:33810262-33810715 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 186-648 |
| Cow position: | chr6:26668551-26668048 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 337 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 189-477 |
| Cow position: | chr6:5130845-5130539 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 27 |
| Conread position: | 189-610 |
| Cow position: | chr6:19769100-19769538 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 17, 77 |
| Conread position: | 190-515 |
| Cow position: | chr6:28053922-28053597 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 238 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 126, 17 |
| Conread position: | 193-645 |
| Cow position: | chr6:35967986-35967494 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 326 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 200-648 |
| Cow position: | chr6:28159906-28160384 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 323 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 21, 145 |
| Conread position: | 202-490 |
| Cow position: | chr6:30318262-30317971 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 8, 14 |
| Conread position: | 204-648 |
| Cow position: | chr6:56452603-56452120 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 327 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 17, 11 |
| Conread position: | 206-446 |
| Cow position: | chr6:31010320-31010073 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 35, 54 |
| Conread position: | 214-648 |
| Cow position: | chr6:7468150-7467675 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 322 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 218-482 |
| Cow position: | chr6:13696656-13696382 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 222-648 |
| Cow position: | chr6:34057333-34056895 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 297 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 18, 92 |
| Conread position: | 227-573 |
| Cow position: | chr6:47849390-47849021 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 52 |
| Conread position: | 235-648 |
| Cow position: | chr6:20450494-20450935 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 166 |
| Conread position: | 239-647 |
| Cow position: | chr6:64252150-64251717 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 289 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 242-646 |
| Cow position: | chr6:65867322-65867760 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 242-672 |
| Cow position: | chr6:30806323-30805870 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 40, 260 |
| Conread position: | 244-476 |
| Cow position: | chr6:63922502-63922741 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 90 |
| Conread position: | 252-648 |
| Cow position: | chr6:45936847-45937273 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 284 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 67, 53 |
| Conread position: | 253-487 |
| Cow position: | chr6:15963345-15963094 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 253-648 |
| Cow position: | chr6:127588-127157 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 253-671 |
| Cow position: | chr6:14305185-14305626 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 206 |
| Conread position: | 280-486 |
| Cow position: | chr6:4467187-4467400 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 280-486 |
| Cow position: | chr6:34493254-34493470 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 38, 115 |
| Conread position: | 280-490 |
| Cow position: | chr6:52194391-52194173 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 67, 38 |
| Conread position: | 280-657 |
| Cow position: | chr6:34504945-34504537 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 115 |
| Conread position: | 282-476 |
| Cow position: | chr6:50623877-50624076 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 101 |
| Conread position: | 286-668 |
| Cow position: | chr6:41050576-41050996 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 291 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 35, 331 |
| Conread position: | 289-523 |
| Cow position: | chr6:1106267-1106014 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 110 |
| Conread position: | 296-672 |
| Cow position: | chr6:61179622-61179226 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 22, 100 |
| Conread position: | 298-648 |
| Cow position: | chr6:34844118-34843738 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 20, 98 |
| Conread position: | 342-657 |
| Cow position: | chr6:7048676-7048986 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 152, 20 |
| Conread position: | 375-672 |
| Cow position: | chr6:68827158-68826846 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 119, 105 |
| Conread position: | 525-649 |
| Cow position: | chr6:31009957-31009832 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
Show alignments to all cow chromosomes.