Cow genome map

Conread name: Ss1.1-Pig3-SRG8020C21.3

Conread position: 7-588
Cow position:
Alignm length: 634
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 226

Conread position: 10-646
Cow position:
Alignm length: 686
Alignm identity: 441
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 68, 38

Conread position: 19-648
Cow position:
Alignm length: 688
Alignm identity: 436
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 11, 262

Conread position: 22-452
Cow position:
Alignm length: 466
Alignm identity: 304
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 7, 0

Conread position: 22-481
Cow position:
Alignm length: 499
Alignm identity: 328
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 7, 296

Conread position: 22-486
Cow position:
Alignm length: 501
Alignm identity: 330
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 208

Conread position: 22-648
Cow position:
Alignm length: 684
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 22-648
Cow position:
Alignm length: 679
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 211

Conread position: 22-648
Cow position:
Alignm length: 672
Alignm identity: 430
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 7, 217

Conread position: 22-648
Cow position:
Alignm length: 677
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 228

Conread position: 22-648
Cow position:
Alignm length: 684
Alignm identity: 443
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 0

Conread position: 22-648
Cow position:
Alignm length: 679
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 22-648
Cow position:
Alignm length: 680
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 206

Conread position: 22-648
Cow position:
Alignm length: 684
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 22-648
Cow position:
Alignm length: 683
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 22-648
Cow position:
Alignm length: 682
Alignm identity: 439
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 7, 404

Conread position: 22-657
Cow position:
Alignm length: 680
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 92

Conread position: 36-441
Cow position:
Alignm length: 432
Alignm identity: 281
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 110

Conread position: 36-450
Cow position:
Alignm length: 434
Alignm identity: 274
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 38

Conread position: 36-476
Cow position:
Alignm length: 475
Alignm identity: 312
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 0

Conread position: 36-481
Cow position:
Alignm length: 481
Alignm identity: 312
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 309

Conread position: 36-490
Cow position:
Alignm length: 469
Alignm identity: 303
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 38

Conread position: 36-550
Cow position:
Alignm length: 548
Alignm identity: 354
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 131

Conread position: 36-648
Cow position:
Alignm length: 656
Alignm identity: 419
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 16, 38

Conread position: 36-648
Cow position:
Alignm length: 663
Alignm identity: 428
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 16, 196

Conread position: 36-648
Cow position:
Alignm length: 663
Alignm identity: 425
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 16, 133

Conread position: 36-648
Cow position:
Alignm length: 660
Alignm identity: 424
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 16, 192

Conread position: 36-648
Cow position:
Alignm length: 669
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 36-648
Cow position:
Alignm length: 670
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 36-648
Cow position:
Alignm length: 671
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 191

Conread position: 36-648
Cow position:
Alignm length: 670
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 38-476
Cow position:
Alignm length: 458
Alignm identity: 292
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 67, 35

Conread position: 38-648
Cow position:
Alignm length: 666
Alignm identity: 428
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 35, 226

Conread position: 49-468
Cow position:
Alignm length: 455
Alignm identity: 303
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 24, 176

Conread position: 49-487
Cow position:
Alignm length: 461
Alignm identity: 307
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 24, 76

Conread position: 61-648
Cow position:
Alignm length: 636
Alignm identity: 419
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 98, 42

Conread position: 99-490
Cow position:
Alignm length: 412
Alignm identity: 277
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 58, 17

Conread position: 115-415
Cow position:
Alignm length: 321
Alignm identity: 223
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 45, 14

Conread position: 117-487
Cow position:
Alignm length: 389
Alignm identity: 267
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 48, 31

Conread position: 117-487
Cow position:
Alignm length: 399
Alignm identity: 265
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 153

Conread position: 119-492
Cow position:
Alignm length: 394
Alignm identity: 264
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 72, 11

Conread position: 121-480
Cow position:
Alignm length: 380
Alignm identity: 251
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 31, 69

Conread position: 128-671
Cow position:
Alignm length: 587
Alignm identity: 379
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 27, 71

Conread position: 135-648
Cow position:
Alignm length: 560
Alignm identity: 370
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 34, 25

Conread position: 138-648
Cow position:
Alignm length: 547
Alignm identity: 352
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 70

Conread position: 145-661
Cow position:
Alignm length: 548
Alignm identity: 363
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 85, 7

Conread position: 151-450
Cow position:
Alignm length: 323
Alignm identity: 218
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 68

Conread position: 151-671
Cow position:
Alignm length: 557
Alignm identity: 365
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 7

Conread position: 152-646
Cow position:
Alignm length: 537
Alignm identity: 351
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 5, 260

Conread position: 153-648
Cow position:
Alignm length: 539
Alignm identity: 355
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 64

Conread position: 153-648
Cow position:
Alignm length: 538
Alignm identity: 358
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 25, 67

Conread position: 153-662
Cow position:
Alignm length: 559
Alignm identity: 373
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 25, 256

Conread position: 154-490
Cow position:
Alignm length: 355
Alignm identity: 237
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 169

Conread position: 154-648
Cow position:
Alignm length: 534
Alignm identity: 358
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 26, 63

Conread position: 155-474
Cow position:
Alignm length: 337
Alignm identity: 230
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 51, 21

Conread position: 156-452
Cow position:
Alignm length: 316
Alignm identity: 213
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 156-466
Cow position:
Alignm length: 334
Alignm identity: 222
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 72

Conread position: 156-476
Cow position:
Alignm length: 339
Alignm identity: 235
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 22, 78

Conread position: 156-481
Cow position:
Alignm length: 346
Alignm identity: 240
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 0

Conread position: 156-481
Cow position:
Alignm length: 347
Alignm identity: 236
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 61

Conread position: 156-483
Cow position:
Alignm length: 352
Alignm identity: 251
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 9

Conread position: 156-491
Cow position:
Alignm length: 358
Alignm identity: 245
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 29, 61

Conread position: 156-619
Cow position:
Alignm length: 497
Alignm identity: 335
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 50, 60

Conread position: 156-621
Cow position:
Alignm length: 504
Alignm identity: 336
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 62, 476

Conread position: 156-621
Cow position:
Alignm length: 508
Alignm identity: 344
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 298

Conread position: 156-636
Cow position:
Alignm length: 506
Alignm identity: 331
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 29, 414

Conread position: 156-639
Cow position:
Alignm length: 533
Alignm identity: 347
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 61

Conread position: 156-643
Cow position:
Alignm length: 523
Alignm identity: 336
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 22, 78

Conread position: 156-648
Cow position:
Alignm length: 534
Alignm identity: 349
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 460

Conread position: 156-648
Cow position:
Alignm length: 535
Alignm identity: 356
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 257

Conread position: 156-648
Cow position:
Alignm length: 535
Alignm identity: 357
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 22, 65

Conread position: 156-648
Cow position:
Alignm length: 534
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 61

Conread position: 156-648
Cow position:
Alignm length: 528
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 114

Conread position: 156-648
Cow position:
Alignm length: 531
Alignm identity: 351
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 22, 422

Conread position: 156-648
Cow position:
Alignm length: 534
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 495

Conread position: 156-648
Cow position:
Alignm length: 537
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 156-648
Cow position:
Alignm length: 533
Alignm identity: 349
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 22, 52

Conread position: 156-648
Cow position:
Alignm length: 534
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 61

Conread position: 156-648
Cow position:
Alignm length: 529
Alignm identity: 339
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 61

Conread position: 156-648
Cow position:
Alignm length: 535
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 156-648
Cow position:
Alignm length: 528
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 60

Conread position: 156-648
Cow position:
Alignm length: 541
Alignm identity: 364
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 24, 62

Conread position: 156-648
Cow position:
Alignm length: 529
Alignm identity: 354
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 177

Conread position: 156-648
Cow position:
Alignm length: 535
Alignm identity: 350
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 65

Conread position: 156-648
Cow position:
Alignm length: 528
Alignm identity: 347
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 22, 355

Conread position: 156-661
Cow position:
Alignm length: 539
Alignm identity: 358
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 119, 71

Conread position: 156-662
Cow position:
Alignm length: 543
Alignm identity: 361
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 29, 78

Conread position: 156-672
Cow position:
Alignm length: 538
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 245

Conread position: 157-478
Cow position:
Alignm length: 340
Alignm identity: 233
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 21, 64

Conread position: 157-486
Cow position:
Alignm length: 347
Alignm identity: 237
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 60

Conread position: 157-490
Cow position:
Alignm length: 352
Alignm identity: 237
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 27, 246

Conread position: 158-477
Cow position:
Alignm length: 345
Alignm identity: 231
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 158-486
Cow position:
Alignm length: 344
Alignm identity: 228
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 59

Conread position: 158-490
Cow position:
Alignm length: 349
Alignm identity: 231
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 171

Conread position: 158-490
Cow position:
Alignm length: 359
Alignm identity: 240
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 59

Conread position: 159-481
Cow position:
Alignm length: 343
Alignm identity: 236
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 19, 60

Conread position: 162-490
Cow position:
Alignm length: 346
Alignm identity: 239
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 7

Conread position: 166-647
Cow position:
Alignm length: 522
Alignm identity: 351
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 13, 51

Conread position: 168-647
Cow position:
Alignm length: 504
Alignm identity: 343
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 56

Conread position: 168-660
Cow position:
Alignm length: 537
Alignm identity: 343
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 61

Conread position: 169-648
Cow position:
Alignm length: 520
Alignm identity: 350
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 37, 7

Conread position: 170-470
Cow position:
Alignm length: 320
Alignm identity: 224
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 76

Conread position: 170-481
Cow position:
Alignm length: 332
Alignm identity: 225
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 8, 0

Conread position: 170-490
Cow position:
Alignm length: 339
Alignm identity: 238
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 8, 47

Conread position: 172-446
Cow position:
Alignm length: 287
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 56

Conread position: 176-476
Cow position:
Alignm length: 317
Alignm identity: 218
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 13

Conread position: 177-442
Cow position:
Alignm length: 284
Alignm identity: 191
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 177-648
Cow position:
Alignm length: 504
Alignm identity: 329
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 44, 109

Conread position: 184-648
Cow position:
Alignm length: 506
Alignm identity: 337
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 32

Conread position: 184-671
Cow position:
Alignm length: 519
Alignm identity: 346
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 79

Conread position: 185-645
Cow position:
Alignm length: 500
Alignm identity: 335
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 31

Conread position: 188-660
Cow position:
Alignm length: 490
Alignm identity: 310
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 101

Conread position: 192-648
Cow position:
Alignm length: 497
Alignm identity: 331
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 29, 280

Conread position: 193-476
Cow position:
Alignm length: 295
Alignm identity: 197
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 90, 29

Conread position: 204-595
Cow position:
Alignm length: 419
Alignm identity: 283
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 17, 11

Conread position: 217-662
Cow position:
Alignm length: 489
Alignm identity: 329
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 7, 259

Conread position: 218-598
Cow position:
Alignm length: 407
Alignm identity: 263
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 55

Conread position: 224-612
Cow position:
Alignm length: 411
Alignm identity: 261
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 83

Conread position: 226-476
Cow position:
Alignm length: 263
Alignm identity: 177
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 172

Conread position: 227-585
Cow position:
Alignm length: 383
Alignm identity: 250
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 20

Conread position: 228-648
Cow position:
Alignm length: 457
Alignm identity: 302
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 229-648
Cow position:
Alignm length: 455
Alignm identity: 305
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 106

Conread position: 236-490
Cow position:
Alignm length: 259
Alignm identity: 172
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 116, 37

Conread position: 239-647
Cow position:
Alignm length: 435
Alignm identity: 295
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 44, 20

Conread position: 244-648
Cow position:
Alignm length: 425
Alignm identity: 289
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 21, 92

Conread position: 247-492
Cow position:
Alignm length: 256
Alignm identity: 177
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 105, 60

Conread position: 249-648
Cow position:
Alignm length: 432
Alignm identity: 286
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 75

Conread position: 250-621
Cow position:
Alignm length: 394
Alignm identity: 251
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 33

Conread position: 252-584
Cow position:
Alignm length: 364
Alignm identity: 258
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 29, 0

Conread position: 253-648
Cow position:
Alignm length: 432
Alignm identity: 296
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 32, 0

Conread position: 253-648
Cow position:
Alignm length: 401
Alignm identity: 251
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 38

Conread position: 253-666
Cow position:
Alignm length: 424
Alignm identity: 284
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 136

Conread position: 254-648
Cow position:
Alignm length: 430
Alignm identity: 293
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 31, 0

Conread position: 278-594
Cow position:
Alignm length: 347
Alignm identity: 236
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 40, 86

Conread position: 286-648
Cow position:
Alignm length: 394
Alignm identity: 261
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 288-650
Cow position:
Alignm length: 395
Alignm identity: 263
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 107

Conread position: 362-647
Cow position:
Alignm length: 302
Alignm identity: 205
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 513-668
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 35

Conread position: 524-666
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 0

Show alignments to all cow chromosomes.