Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8020C21.3 |
| Conread position: | 1-648 |
| Cow position: | chr9:14002248-14002944 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 26 |
| Conread position: | 11-648 |
| Cow position: | chr9:1072073-1071380 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 449 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 15-480 |
| Cow position: | chr9:9515275-9515757 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 310 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 28, 90 |
| Conread position: | 17-492 |
| Cow position: | chr9:39729357-39728861 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 327 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 49, 75 |
| Conread position: | 17-593 |
| Cow position: | chr9:3310835-3311467 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 412 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 22-481 |
| Cow position: | chr9:50326067-50326561 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 323 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 30, 398 |
| Conread position: | 22-499 |
| Cow position: | chr9:37175026-37175540 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 333 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-644 |
| Cow position: | chr9:1098815-1099494 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 211 |
| Conread position: | 22-648 |
| Cow position: | chr9:1249772-1249093 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 228 |
| Conread position: | 22-648 |
| Cow position: | chr9:48796071-48795388 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 441 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-648 |
| Cow position: | chr9:52525379-52526055 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-648 |
| Cow position: | chr9:56175996-56176674 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 215 |
| Conread position: | 36-476 |
| Cow position: | chr9:9367238-9367685 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 10, 191 |
| Conread position: | 36-481 |
| Cow position: | chr9:2680811-2681291 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 16, 393 |
| Conread position: | 36-496 |
| Cow position: | chr9:6251507-6252002 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 337 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 14, 72 |
| Conread position: | 36-647 |
| Cow position: | chr9:7004966-7005622 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 71 |
| Conread position: | 36-648 |
| Cow position: | chr9:1063462-1062791 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 436 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 16, 194 |
| Conread position: | 36-648 |
| Cow position: | chr9:2835756-2835092 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 420 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 17, 434 |
| Conread position: | 36-648 |
| Cow position: | chr9:3412677-3412016 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 422 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 194 |
| Conread position: | 36-648 |
| Cow position: | chr9:4941253-4940594 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 427 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 16, 211 |
| Conread position: | 36-648 |
| Cow position: | chr9:34240862-34240195 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 391 |
| Conread position: | 36-648 |
| Cow position: | chr9:47004978-47005645 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 439 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 16, 360 |
| Conread position: | 36-648 |
| Cow position: | chr9:47044207-47044851 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 423 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 208 |
| Conread position: | 36-648 |
| Cow position: | chr9:59480612-59479944 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 196 |
| Conread position: | 39-648 |
| Cow position: | chr9:3545067-3545731 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 436 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 13, 193 |
| Conread position: | 40-597 |
| Cow position: | chr9:27487630-27487039 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 97 |
| Conread position: | 40-648 |
| Cow position: | chr9:44167836-44168493 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 622 |
| Conread position: | 49-468 |
| Cow position: | chr9:4648379-4647947 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 25, 186 |
| Conread position: | 49-490 |
| Cow position: | chr9:37067115-37067570 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 307 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 24, 175 |
| Conread position: | 49-634 |
| Cow position: | chr9:45875770-45876407 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 419 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 24, 569 |
| Conread position: | 49-672 |
| Cow position: | chr9:3960890-3960239 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 52-490 |
| Cow position: | chr9:16516009-16516481 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 319 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 12, 286 |
| Conread position: | 55-648 |
| Cow position: | chr9:16177851-16178491 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 52 |
| Conread position: | 56-474 |
| Cow position: | chr9:2279934-2280370 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 285 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 102 |
| Conread position: | 111-487 |
| Cow position: | chr9:27098670-27099058 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 115-434 |
| Cow position: | chr9:2102157-2102477 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 91, 15 |
| Conread position: | 115-671 |
| Cow position: | chr9:59430850-59431432 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 36 |
| Conread position: | 116-484 |
| Cow position: | chr9:52514451-52514843 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 41, 134 |
| Conread position: | 117-470 |
| Cow position: | chr9:31061051-31061423 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 44, 49 |
| Conread position: | 117-504 |
| Cow position: | chr9:10746313-10745905 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 12 |
| Conread position: | 118-498 |
| Cow position: | chr9:4306735-4306336 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 53 |
| Conread position: | 122-593 |
| Cow position: | chr9:10109995-10110482 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 31 |
| Conread position: | 130-646 |
| Cow position: | chr9:9198458-9199001 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 360 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 130-647 |
| Cow position: | chr9:61238600-61238048 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 360 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 29, 204 |
| Conread position: | 133-490 |
| Cow position: | chr9:26088631-26088277 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 111, 26 |
| Conread position: | 134-648 |
| Cow position: | chr9:6708570-6708013 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 136-490 |
| Cow position: | chr9:15986409-15986769 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 34, 24 |
| Conread position: | 138-490 |
| Cow position: | chr9:9312962-9312593 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 261 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 141-647 |
| Cow position: | chr9:27929833-27930359 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 345 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 153-610 |
| Cow position: | chr9:17301758-17301266 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 333 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 25, 59 |
| Conread position: | 155-648 |
| Cow position: | chr9:46668422-46667896 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 156-461 |
| Cow position: | chr9:9680249-9679933 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 245 |
| Conread position: | 156-476 |
| Cow position: | chr9:5006348-5006683 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-476 |
| Cow position: | chr9:26054420-26054757 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 299 |
| Conread position: | 156-478 |
| Cow position: | chr9:28003919-28004263 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 20, 301 |
| Conread position: | 156-481 |
| Cow position: | chr9:22441867-22442204 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 156-481 |
| Cow position: | chr9:31113527-31113869 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-486 |
| Cow position: | chr9:18539035-18539387 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 254 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 22, 250 |
| Conread position: | 156-486 |
| Cow position: | chr9:31809954-31810300 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 156-490 |
| Cow position: | chr9:22320332-22319981 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 156-490 |
| Cow position: | chr9:27291593-27291237 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 156-490 |
| Cow position: | chr9:30489962-30490302 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 156-492 |
| Cow position: | chr9:62734774-62734423 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 211 |
| Conread position: | 156-504 |
| Cow position: | chr9:43302848-43302481 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 22, 56 |
| Conread position: | 156-586 |
| Cow position: | chr9:31418132-31417663 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-638 |
| Cow position: | chr9:55797730-55797211 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 350 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 22, 94 |
| Conread position: | 156-643 |
| Cow position: | chr9:26277029-26277553 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-646 |
| Cow position: | chr9:22655185-22655714 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 355 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 156-646 |
| Cow position: | chr9:52408945-52408423 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 345 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 24, 61 |
| Conread position: | 156-647 |
| Cow position: | chr9:5627188-5627722 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 361 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 22, 252 |
| Conread position: | 156-648 |
| Cow position: | chr9:202919-202380 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 359 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-648 |
| Cow position: | chr9:999836-1000369 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-648 |
| Cow position: | chr9:1992164-1991632 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 362 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr9:2526661-2527192 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 353 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 22, 154 |
| Conread position: | 156-648 |
| Cow position: | chr9:2872853-2873378 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 349 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 29, 91 |
| Conread position: | 156-648 |
| Cow position: | chr9:10939095-10939628 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 358 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr9:17632844-17633384 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 363 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 156-648 |
| Cow position: | chr9:18507455-18506920 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr9:19156909-19156389 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 348 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr9:29788296-29787773 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 347 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 156-648 |
| Cow position: | chr9:30674442-30674979 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 360 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr9:32971749-32972271 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-648 |
| Cow position: | chr9:35544157-35543624 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 156-648 |
| Cow position: | chr9:38678507-38679032 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 77 |
| Conread position: | 156-648 |
| Cow position: | chr9:50002830-50003352 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 350 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 29, 144 |
| Conread position: | 156-648 |
| Cow position: | chr9:56302068-56301536 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 188 |
| Conread position: | 156-656 |
| Cow position: | chr9:27782519-27781978 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 360 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-656 |
| Cow position: | chr9:59196227-59196769 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 352 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 29, 108 |
| Conread position: | 156-660 |
| Cow position: | chr9:19078029-19078559 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 356 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 156-662 |
| Cow position: | chr9:3060958-3061513 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 359 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 23, 193 |
| Conread position: | 157-490 |
| Cow position: | chr9:1639117-1639471 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 54 |
| Conread position: | 157-648 |
| Cow position: | chr9:9015447-9015978 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 60 |
| Conread position: | 158-646 |
| Cow position: | chr9:7059689-7059163 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 351 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 158-647 |
| Cow position: | chr9:14344934-14344415 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 342 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 27, 176 |
| Conread position: | 158-648 |
| Cow position: | chr9:15053509-15052976 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 255 |
| Conread position: | 158-662 |
| Cow position: | chr9:24979281-24978747 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 80 |
| Conread position: | 158-672 |
| Cow position: | chr9:6978609-6979130 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 337 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 159-476 |
| Cow position: | chr9:26738392-26738731 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 19, 58 |
| Conread position: | 159-490 |
| Cow position: | chr9:26188914-26189258 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 170 |
| Conread position: | 159-666 |
| Cow position: | chr9:26101046-26100528 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 353 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 160-585 |
| Cow position: | chr9:49754997-49754555 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 24, 58 |
| Conread position: | 160-648 |
| Cow position: | chr9:27037486-27038012 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 356 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 18, 58 |
| Conread position: | 165-671 |
| Cow position: | chr9:35747491-35746955 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 462 |
| Conread position: | 172-490 |
| Cow position: | chr9:56155493-56155159 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 172-648 |
| Cow position: | chr9:3757443-3756927 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 341 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 12, 44 |
| Conread position: | 177-645 |
| Cow position: | chr9:128456-127951 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 336 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 177-672 |
| Cow position: | chr9:8097565-8098086 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 346 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 186-480 |
| Cow position: | chr9:29337171-29337479 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 66 |
| Conread position: | 189-672 |
| Cow position: | chr9:26280258-26280772 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 343 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 85, 200 |
| Conread position: | 214-648 |
| Cow position: | chr9:8404850-8405315 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 7, 49 |
| Conread position: | 217-646 |
| Cow position: | chr9:42903000-42902551 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 217-648 |
| Cow position: | chr9:3935207-3934751 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 220-486 |
| Cow position: | chr9:17017186-17017471 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 222-490 |
| Cow position: | chr9:64026366-64026088 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 55, 14 |
| Conread position: | 227-634 |
| Cow position: | chr9:10644191-10643748 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 242-647 |
| Cow position: | chr9:54995109-54995540 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 39, 210 |
| Conread position: | 243-648 |
| Cow position: | chr9:2029030-2028603 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 35, 153 |
| Conread position: | 252-648 |
| Cow position: | chr9:46626785-46627215 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 356 |
| Conread position: | 254-484 |
| Cow position: | chr9:8283555-8283800 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 256-648 |
| Cow position: | chr9:10567890-10567462 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 284 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 29, 145 |
| Conread position: | 286-587 |
| Cow position: | chr9:5534421-5534090 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 110 |
| Conread position: | 286-648 |
| Cow position: | chr9:5429978-5430371 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 289-486 |
| Cow position: | chr9:51179387-51179179 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 107 |
| Conread position: | 289-659 |
| Cow position: | chr9:50839948-50840348 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 271 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 290-646 |
| Cow position: | chr9:34676854-34676474 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 28, 93 |
| Conread position: | 292-492 |
| Cow position: | chr9:16012383-16012177 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 104 |
| Conread position: | 293-648 |
| Cow position: | chr9:37159090-37158706 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 300-672 |
| Cow position: | chr9:1309238-1309632 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 18, 46 |
| Conread position: | 306-644 |
| Cow position: | chr9:28680731-28681100 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 350-648 |
| Cow position: | chr9:21461067-21461379 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 266 |
| Conread position: | 438-670 |
| Cow position: | chr9:47814000-47814241 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 526-648 |
| Cow position: | chr9:13529945-13529822 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
Show alignments to all cow chromosomes.