Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8021E07.5 |
| Conread position: | 187-445 |
| Cow position: | chr27:20514830-20514562 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 188-443 |
| Cow position: | chr27:4858630-4858877 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 20 |
| Conread position: | 188-444 |
| Cow position: | chr27:15865619-15865349 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 188-444 |
| Cow position: | chr27:20748999-20749260 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 89 |
| Conread position: | 204-433 |
| Cow position: | chr27:18882648-18882408 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 75, 129 |
| Conread position: | 210-434 |
| Cow position: | chr27:6106691-6106454 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 30, 70 |
| Conread position: | 211-369 |
| Cow position: | chr27:30908663-30908500 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 98 |
| Conread position: | 212-370 |
| Cow position: | chr27:30359396-30359234 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 213-351 |
| Cow position: | chr27:26407178-26407313 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 213-369 |
| Cow position: | chr27:12710237-12710079 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 116 |
| Conread position: | 213-425 |
| Cow position: | chr27:12459269-12459047 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 213-427 |
| Cow position: | chr27:6319907-6319679 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 213-433 |
| Cow position: | chr27:7343440-7343677 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 32, 125 |
| Conread position: | 213-434 |
| Cow position: | chr27:31386641-31386879 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 234 |
| Conread position: | 213-436 |
| Cow position: | chr27:28478568-28478330 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 213-437 |
| Cow position: | chr27:16705244-16704997 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-440 |
| Cow position: | chr27:19509001-19508756 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 192 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 214-316 |
| Cow position: | chr27:21130293-21130187 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-348 |
| Cow position: | chr27:24014752-24014890 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-362 |
| Cow position: | chr27:20549722-20549875 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 137 |
| Conread position: | 214-364 |
| Cow position: | chr27:20517645-20517497 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 109 |
| Conread position: | 214-365 |
| Cow position: | chr27:237256-237103 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 31, 93 |
| Conread position: | 214-366 |
| Cow position: | chr27:6073916-6073762 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-366 |
| Cow position: | chr27:26999435-26999592 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 35, 123 |
| Conread position: | 214-369 |
| Cow position: | chr27:6302481-6302639 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 31, 87 |
| Conread position: | 214-369 |
| Cow position: | chr27:6674266-6674109 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-369 |
| Cow position: | chr27:15378492-15378645 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 214-369 |
| Cow position: | chr27:16589715-16589874 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 214-369 |
| Cow position: | chr27:22348477-22348316 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-369 |
| Cow position: | chr27:24305421-24305266 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 80 |
| Conread position: | 214-369 |
| Cow position: | chr27:26239012-26238857 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 31, 121 |
| Conread position: | 214-369 |
| Cow position: | chr27:30489423-30489582 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-372 |
| Cow position: | chr27:20481378-20481536 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 29, 36 |
| Conread position: | 214-388 |
| Cow position: | chr27:30407050-30407228 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 51 |
| Conread position: | 214-394 |
| Cow position: | chr27:18593256-18593083 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 66 |
| Conread position: | 214-424 |
| Cow position: | chr27:299394-299614 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-427 |
| Cow position: | chr27:8790754-8790985 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-430 |
| Cow position: | chr27:22171284-22171056 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-430 |
| Cow position: | chr27:22220541-22220304 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-430 |
| Cow position: | chr27:26984334-26984108 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-430 |
| Cow position: | chr27:31210533-31210303 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 64, 116 |
| Conread position: | 214-430 |
| Cow position: | chr27:31557064-31556848 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 26, 107 |
| Conread position: | 214-431 |
| Cow position: | chr27:8353463-8353248 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 31, 140 |
| Conread position: | 214-431 |
| Cow position: | chr27:20812892-20812677 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 31, 164 |
| Conread position: | 214-431 |
| Cow position: | chr27:24440237-24440464 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 21 |
| Conread position: | 214-432 |
| Cow position: | chr27:26853373-26853599 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-433 |
| Cow position: | chr27:29504662-29504879 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 31, 134 |
| Conread position: | 214-435 |
| Cow position: | chr27:16103794-16103560 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 31, 74 |
| Conread position: | 214-436 |
| Cow position: | chr27:6981907-6981692 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 30, 102 |
| Conread position: | 214-437 |
| Cow position: | chr27:4944527-4944759 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 214-440 |
| Cow position: | chr27:1636948-1637180 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 120 |
| Conread position: | 214-444 |
| Cow position: | chr27:20828723-20828964 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 123 |
| Conread position: | 214-445 |
| Cow position: | chr27:17397467-17397712 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 214-445 |
| Cow position: | chr27:22035391-22035632 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 215-348 |
| Cow position: | chr27:1123017-1122881 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 30, 60 |
| Conread position: | 215-364 |
| Cow position: | chr27:4673002-4672845 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 215-365 |
| Cow position: | chr27:20067991-20068143 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 215-368 |
| Cow position: | chr27:1768639-1768794 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 215-368 |
| Cow position: | chr27:21669131-21669281 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 122 |
| Conread position: | 215-369 |
| Cow position: | chr27:20045876-20045720 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 123, 30 |
| Conread position: | 215-369 |
| Cow position: | chr27:30988783-30988626 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 215-380 |
| Cow position: | chr27:17918327-17918496 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 215-423 |
| Cow position: | chr27:16284461-16284250 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 30, 122 |
| Conread position: | 215-424 |
| Cow position: | chr27:27632615-27632833 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 88 |
| Conread position: | 215-427 |
| Cow position: | chr27:15315503-15315280 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 30, 192 |
| Conread position: | 215-427 |
| Cow position: | chr27:22225609-22225812 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 30, 137 |
| Conread position: | 215-432 |
| Cow position: | chr27:14670396-14670628 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 215-436 |
| Cow position: | chr27:23918048-23918286 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 30, 164 |
| Conread position: | 215-449 |
| Cow position: | chr27:15454194-15453948 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 215-452 |
| Cow position: | chr27:21393521-21393764 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 216-369 |
| Cow position: | chr27:788812-788968 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 24, 128 |
| Conread position: | 216-369 |
| Cow position: | chr27:23483209-23483054 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 216-387 |
| Cow position: | chr27:19546529-19546703 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 62 |
| Conread position: | 216-404 |
| Cow position: | chr27:22421866-22422058 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 216-413 |
| Cow position: | chr27:23107919-23108131 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 64 |
| Conread position: | 216-419 |
| Cow position: | chr27:15409051-15409260 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 216-422 |
| Cow position: | chr27:10992338-10992136 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 216-427 |
| Cow position: | chr27:10323822-10323601 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 28, 64 |
| Conread position: | 216-430 |
| Cow position: | chr27:22245611-22245396 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 29, 85 |
| Conread position: | 216-430 |
| Cow position: | chr27:26643669-26643457 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 144, 87 |
| Conread position: | 216-431 |
| Cow position: | chr27:19388003-19387774 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 29, 194 |
| Conread position: | 216-431 |
| Cow position: | chr27:20092849-20093060 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 143 |
| Conread position: | 216-431 |
| Cow position: | chr27:23560046-23560279 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 216-431 |
| Cow position: | chr27:29597766-29597992 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 216-431 |
| Cow position: | chr27:30890275-30890054 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 216-432 |
| Cow position: | chr27:15668786-15669022 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 216-434 |
| Cow position: | chr27:26226306-26226537 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 216-434 |
| Cow position: | chr27:26617391-26617164 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 65 |
| Conread position: | 216-435 |
| Cow position: | chr27:7615102-7615321 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 216-437 |
| Cow position: | chr27:12516178-12515941 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 216-444 |
| Cow position: | chr27:22386853-22386627 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 216-444 |
| Cow position: | chr27:27856318-27856079 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 200 |
| Conread position: | 216-444 |
| Cow position: | chr27:31169125-31169365 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 32, 124 |
| Conread position: | 217-368 |
| Cow position: | chr27:27694788-27694939 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 33, 115 |
| Conread position: | 217-369 |
| Cow position: | chr27:20795774-20795621 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 217-369 |
| Cow position: | chr27:23594305-23594150 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 217-370 |
| Cow position: | chr27:22569767-22569612 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 72, 105 |
| Conread position: | 217-373 |
| Cow position: | chr27:4720131-4720289 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 217-430 |
| Cow position: | chr27:27389037-27389273 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 217-432 |
| Cow position: | chr27:25783605-25783397 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 27, 64 |
| Conread position: | 217-437 |
| Cow position: | chr27:9977669-9977433 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 28, 42 |
| Conread position: | 218-363 |
| Cow position: | chr27:17331479-17331337 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 106 |
| Conread position: | 218-369 |
| Cow position: | chr27:25277123-25276972 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 26, 134 |
| Conread position: | 218-380 |
| Cow position: | chr27:4835623-4835790 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 218-423 |
| Cow position: | chr27:12596755-12596543 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 50 |
| Conread position: | 218-431 |
| Cow position: | chr27:426952-426722 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 218-431 |
| Cow position: | chr27:14343472-14343682 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 27, 46 |
| Conread position: | 218-434 |
| Cow position: | chr27:22179786-22180016 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 219-344 |
| Cow position: | chr27:13376266-13376392 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 219-367 |
| Cow position: | chr27:31148743-31148592 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 123 |
| Conread position: | 219-427 |
| Cow position: | chr27:7412375-7412150 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 219-428 |
| Cow position: | chr27:27055268-27055052 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 219-432 |
| Cow position: | chr27:29431446-29431225 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 26, 55 |
| Conread position: | 219-437 |
| Cow position: | chr27:28206781-28206550 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 28, 63 |
| Conread position: | 220-428 |
| Cow position: | chr27:16478361-16478566 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 48 |
| Conread position: | 221-423 |
| Cow position: | chr27:3306753-3306547 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 67, 53 |
| Conread position: | 221-427 |
| Cow position: | chr27:23452441-23452220 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 221-430 |
| Cow position: | chr27:20283624-20283398 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 119 |
| Conread position: | 221-450 |
| Cow position: | chr27:15002998-15003246 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 222-451 |
| Cow position: | chr27:23485188-23484948 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 25, 117 |
| Conread position: | 224-423 |
| Cow position: | chr27:7425211-7425427 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 225-446 |
| Cow position: | chr27:13204435-13204204 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 18, 215 |
| Conread position: | 226-388 |
| Cow position: | chr27:590787-590952 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 19, 129 |
| Conread position: | 228-368 |
| Cow position: | chr27:212930-212785 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 228-430 |
| Cow position: | chr27:17646195-17646399 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 17, 180 |
| Conread position: | 233-431 |
| Cow position: | chr27:18435165-18435377 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 233-437 |
| Cow position: | chr27:4411743-4411946 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 233-444 |
| Cow position: | chr27:6392682-6392470 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 25 |
| Conread position: | 234-369 |
| Cow position: | chr27:26323415-26323277 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 234-431 |
| Cow position: | chr27:6162443-6162650 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 236-451 |
| Cow position: | chr27:22547434-22547654 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 9, 69 |
| Conread position: | 237-436 |
| Cow position: | chr27:24693377-24693166 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 238-363 |
| Cow position: | chr27:19717878-19717749 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 238-430 |
| Cow position: | chr27:24223915-24223709 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 238-445 |
| Cow position: | chr27:11134047-11133828 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 51, 9 |
| Conread position: | 239-423 |
| Cow position: | chr27:17102857-17102661 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 80 |
| Conread position: | 239-432 |
| Cow position: | chr27:20888681-20888487 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 110 |
| Conread position: | 240-365 |
| Cow position: | chr27:26506702-26506577 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 240-431 |
| Cow position: | chr27:2957366-2957170 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 5, 32 |
| Conread position: | 240-432 |
| Cow position: | chr27:19576363-19576571 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 242-427 |
| Cow position: | chr27:23929921-23929735 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 123, 45 |
| Conread position: | 242-451 |
| Cow position: | chr27:19741450-19741657 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 50, 111 |
| Conread position: | 243-426 |
| Cow position: | chr27:20770571-20770758 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 145 |
| Conread position: | 245-434 |
| Cow position: | chr27:10581484-10581284 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 121, 26 |
| Conread position: | 247-366 |
| Cow position: | chr27:15859344-15859465 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 250-357 |
| Cow position: | chr27:9697603-9697494 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 35, 103 |
| Conread position: | 250-428 |
| Cow position: | chr27:2949377-2949560 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 32, 50 |
| Conread position: | 253-426 |
| Cow position: | chr27:16871996-16872174 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 105 |
| Conread position: | 253-427 |
| Cow position: | chr27:16047551-16047730 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 253-431 |
| Cow position: | chr27:4398544-4398732 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 254-437 |
| Cow position: | chr27:24358279-24358087 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 26, 60 |
| Conread position: | 256-431 |
| Cow position: | chr27:27528876-27529061 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 256-451 |
| Cow position: | chr27:20048578-20048371 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 77 |
| Conread position: | 257-441 |
| Cow position: | chr27:1067511-1067319 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 258-431 |
| Cow position: | chr27:18491498-18491320 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 89 |
| Conread position: | 258-434 |
| Cow position: | chr27:28476175-28476358 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 97, 22 |
| Conread position: | 260-432 |
| Cow position: | chr27:6151238-6151066 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 265-430 |
| Cow position: | chr27:20325286-20325111 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 81 |
| Conread position: | 267-431 |
| Cow position: | chr27:3498484-3498309 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 270-452 |
| Cow position: | chr27:5781018-5780836 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 10, 148 |
| Conread position: | 271-368 |
| Cow position: | chr27:29183287-29183387 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 276-423 |
| Cow position: | chr27:23495788-23495934 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 111, 11 |
| Conread position: | 288-431 |
| Cow position: | chr27:21447920-21448069 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 289-427 |
| Cow position: | chr27:20561490-20561345 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 296-436 |
| Cow position: | chr27:23862537-23862674 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 129, 57 |
Show alignments to all cow chromosomes.