Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8021E07.5 |
| Conread position: | 188-364 |
| Cow position: | chr29:13028384-13028561 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 94 |
| Conread position: | 188-430 |
| Cow position: | chr29:4520282-4520531 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 197-428 |
| Cow position: | chr29:396362-396601 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 201-368 |
| Cow position: | chr29:9310551-9310725 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 201-417 |
| Cow position: | chr29:4423483-4423262 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 44, 7 |
| Conread position: | 201-444 |
| Cow position: | chr29:1933618-1933353 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 134 |
| Conread position: | 203-429 |
| Cow position: | chr29:22032687-22032447 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 10, 209 |
| Conread position: | 204-416 |
| Cow position: | chr29:40791263-40791484 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 9, 70 |
| Conread position: | 209-431 |
| Cow position: | chr29:16278950-16279179 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 36, 113 |
| Conread position: | 209-432 |
| Cow position: | chr29:34359854-34359621 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 210-416 |
| Cow position: | chr29:17804497-17804717 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 95 |
| Conread position: | 212-426 |
| Cow position: | chr29:40117537-40117762 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 33, 96 |
| Conread position: | 212-432 |
| Cow position: | chr29:22167113-22166884 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 213-369 |
| Cow position: | chr29:28066457-28066611 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 213-424 |
| Cow position: | chr29:45005661-45005446 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 213-427 |
| Cow position: | chr29:26540574-26540342 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 213-431 |
| Cow position: | chr29:6208034-6208243 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 213-433 |
| Cow position: | chr29:20770313-20770548 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 213-433 |
| Cow position: | chr29:29769385-29769150 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 214-344 |
| Cow position: | chr29:24578830-24578964 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-344 |
| Cow position: | chr29:27329860-27329993 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 121 |
| Conread position: | 214-348 |
| Cow position: | chr29:28446281-28446151 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 214-357 |
| Cow position: | chr29:4002858-4003006 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-363 |
| Cow position: | chr29:31200225-31200379 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-364 |
| Cow position: | chr29:30548743-30548897 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-366 |
| Cow position: | chr29:36217082-36217235 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-367 |
| Cow position: | chr29:1556899-1557055 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 214-368 |
| Cow position: | chr29:34687802-34687960 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-368 |
| Cow position: | chr29:38978499-38978656 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 34, 98 |
| Conread position: | 214-369 |
| Cow position: | chr29:18085539-18085700 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-369 |
| Cow position: | chr29:21285327-21285485 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 31, 90 |
| Conread position: | 214-369 |
| Cow position: | chr29:23243910-23243752 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 214-369 |
| Cow position: | chr29:40873978-40874138 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-388 |
| Cow position: | chr29:29324453-29324282 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 31, 90 |
| Conread position: | 214-405 |
| Cow position: | chr29:27826490-27826681 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 133 |
| Conread position: | 214-410 |
| Cow position: | chr29:23825243-23825031 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-416 |
| Cow position: | chr29:39111344-39111137 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 31, 97 |
| Conread position: | 214-421 |
| Cow position: | chr29:5788995-5789207 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 214-427 |
| Cow position: | chr29:26275577-26275799 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 78 |
| Conread position: | 214-431 |
| Cow position: | chr29:19762238-19762465 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 214-431 |
| Cow position: | chr29:22613397-22613623 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 31, 114 |
| Conread position: | 214-431 |
| Cow position: | chr29:25737447-25737218 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 31, 196 |
| Conread position: | 214-433 |
| Cow position: | chr29:4070595-4070827 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 31, 66 |
| Conread position: | 214-433 |
| Cow position: | chr29:39038302-39038066 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 31, 233 |
| Conread position: | 214-435 |
| Cow position: | chr29:38980106-38979874 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 31, 20 |
| Conread position: | 214-436 |
| Cow position: | chr29:22028987-22028754 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 214-445 |
| Cow position: | chr29:22162282-22162048 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 31, 186 |
| Conread position: | 215-354 |
| Cow position: | chr29:17607386-17607527 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 113 |
| Conread position: | 215-356 |
| Cow position: | chr29:5892813-5892958 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 215-368 |
| Cow position: | chr29:32197665-32197821 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 139 |
| Conread position: | 215-369 |
| Cow position: | chr29:683522-683366 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 30, 119 |
| Conread position: | 215-369 |
| Cow position: | chr29:34359009-34358852 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 215-380 |
| Cow position: | chr29:36210113-36210276 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 21, 76 |
| Conread position: | 215-413 |
| Cow position: | chr29:742683-742487 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 9, 141 |
| Conread position: | 215-427 |
| Cow position: | chr29:36530835-36531064 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 215-431 |
| Cow position: | chr29:12626008-12625796 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 139 |
| Conread position: | 215-431 |
| Cow position: | chr29:23825638-23825865 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 215-435 |
| Cow position: | chr29:9709662-9709899 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 215-436 |
| Cow position: | chr29:26615752-26615534 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 147 |
| Conread position: | 215-439 |
| Cow position: | chr29:36952328-36952102 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 215-440 |
| Cow position: | chr29:4085281-4085511 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 60 |
| Conread position: | 215-443 |
| Cow position: | chr29:706980-706761 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 11 |
| Conread position: | 215-444 |
| Cow position: | chr29:5063111-5063359 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 215-447 |
| Cow position: | chr29:10058567-10058324 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 30, 120 |
| Conread position: | 215-448 |
| Cow position: | chr29:5409173-5408923 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 32, 125 |
| Conread position: | 215-452 |
| Cow position: | chr29:7310645-7310889 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 83 |
| Conread position: | 216-344 |
| Cow position: | chr29:18012527-18012659 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 216-356 |
| Cow position: | chr29:30708650-30708510 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 216-360 |
| Cow position: | chr29:5186524-5186376 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 216-364 |
| Cow position: | chr29:30681741-30681590 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 216-366 |
| Cow position: | chr29:10156332-10156183 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 29, 46 |
| Conread position: | 216-369 |
| Cow position: | chr29:1325412-1325564 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 216-369 |
| Cow position: | chr29:13639398-13639240 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 216-369 |
| Cow position: | chr29:26559274-26559120 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 216-382 |
| Cow position: | chr29:2263023-2262857 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 28, 163 |
| Conread position: | 216-426 |
| Cow position: | chr29:43328613-43328829 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 31, 173 |
| Conread position: | 216-429 |
| Cow position: | chr29:36357098-36357328 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 216-430 |
| Cow position: | chr29:31981800-31982022 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 214 |
| Conread position: | 216-431 |
| Cow position: | chr29:41811618-41811407 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 29, 142 |
| Conread position: | 216-432 |
| Cow position: | chr29:26778852-26779079 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 216-433 |
| Cow position: | chr29:732590-732814 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 106 |
| Conread position: | 216-433 |
| Cow position: | chr29:12680125-12680362 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 216-433 |
| Cow position: | chr29:24624219-24624444 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 29, 41 |
| Conread position: | 216-433 |
| Cow position: | chr29:25092083-25092310 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 143, 29 |
| Conread position: | 216-436 |
| Cow position: | chr29:17109929-17110160 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 182 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 29, 196 |
| Conread position: | 216-442 |
| Cow position: | chr29:17222382-17222628 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 230 |
| Conread position: | 216-444 |
| Cow position: | chr29:17154748-17154974 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 29, 144 |
| Conread position: | 216-444 |
| Cow position: | chr29:31928958-31929200 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 29, 91 |
| Conread position: | 216-444 |
| Cow position: | chr29:35292061-35292302 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 31, 117 |
| Conread position: | 217-356 |
| Cow position: | chr29:20903315-20903177 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 217-366 |
| Cow position: | chr29:5210462-5210614 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 217-369 |
| Cow position: | chr29:8926491-8926335 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 217-424 |
| Cow position: | chr29:3292918-3293138 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 123 |
| Conread position: | 217-427 |
| Cow position: | chr29:28195545-28195335 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 217-431 |
| Cow position: | chr29:30350961-30350748 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 147 |
| Conread position: | 217-436 |
| Cow position: | chr29:10456592-10456378 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 131 |
| Conread position: | 217-437 |
| Cow position: | chr29:35501684-35501457 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 217-447 |
| Cow position: | chr29:32894233-32894478 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 218-369 |
| Cow position: | chr29:40299049-40298894 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 218-431 |
| Cow position: | chr29:22721347-22721555 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 75 |
| Conread position: | 218-437 |
| Cow position: | chr29:23697947-23698178 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 135 |
| Conread position: | 219-348 |
| Cow position: | chr29:23155200-23155331 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 219-361 |
| Cow position: | chr29:29176642-29176499 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 219-369 |
| Cow position: | chr29:22735133-22734981 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 219-369 |
| Cow position: | chr29:28840128-28840282 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 219-371 |
| Cow position: | chr29:11053887-11053730 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 219-380 |
| Cow position: | chr29:32211094-32210934 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 219-431 |
| Cow position: | chr29:7624151-7624367 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 82 |
| Conread position: | 219-431 |
| Cow position: | chr29:16290698-16290927 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 113 |
| Conread position: | 219-444 |
| Cow position: | chr29:4874911-4874673 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 26, 103 |
| Conread position: | 219-444 |
| Cow position: | chr29:19949281-19949520 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 221-425 |
| Cow position: | chr29:1011606-1011397 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 221-427 |
| Cow position: | chr29:8862505-8862301 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 222-364 |
| Cow position: | chr29:22723576-22723722 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 222-433 |
| Cow position: | chr29:41112904-41112686 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 225-431 |
| Cow position: | chr29:31651389-31651604 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 225-436 |
| Cow position: | chr29:9378614-9378842 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 227-368 |
| Cow position: | chr29:11527809-11527667 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 227-372 |
| Cow position: | chr29:32176660-32176803 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 18, 80 |
| Conread position: | 228-380 |
| Cow position: | chr29:38580961-38581117 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 228-427 |
| Cow position: | chr29:28979517-28979318 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 228-431 |
| Cow position: | chr29:38754958-38754734 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 108 |
| Conread position: | 230-437 |
| Cow position: | chr29:21592691-21592903 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 197 |
| Conread position: | 231-366 |
| Cow position: | chr29:28166234-28166099 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 233-428 |
| Cow position: | chr29:7290762-7290969 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 233-428 |
| Cow position: | chr29:29308586-29308383 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 234-435 |
| Cow position: | chr29:32963536-32963728 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 11, 40 |
| Conread position: | 234-444 |
| Cow position: | chr29:36781317-36781095 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 236-433 |
| Cow position: | chr29:19363701-19363911 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 207 |
| Conread position: | 237-432 |
| Cow position: | chr29:22729558-22729768 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 238-427 |
| Cow position: | chr29:19176922-19176717 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 239-369 |
| Cow position: | chr29:19125315-19125448 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 242-436 |
| Cow position: | chr29:43088307-43088514 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 243-367 |
| Cow position: | chr29:15796483-15796609 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 243-367 |
| Cow position: | chr29:15797949-15798076 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 247-428 |
| Cow position: | chr29:12890686-12890875 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 114, 158 |
| Conread position: | 248-435 |
| Cow position: | chr29:8190198-8190010 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 40, 125 |
| Conread position: | 250-369 |
| Cow position: | chr29:25288919-25288801 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 252-432 |
| Cow position: | chr29:32215713-32215907 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 10, 24 |
| Conread position: | 253-369 |
| Cow position: | chr29:17022157-17022276 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 254-368 |
| Cow position: | chr29:18579827-18579714 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 254-426 |
| Cow position: | chr29:11489572-11489398 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 97, 74 |
| Conread position: | 254-451 |
| Cow position: | chr29:9622684-9622487 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 35, 106 |
| Conread position: | 256-444 |
| Cow position: | chr29:40351065-40350868 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 69 |
| Conread position: | 260-430 |
| Cow position: | chr29:26207989-26208160 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 110 |
| Conread position: | 261-369 |
| Cow position: | chr29:28948989-28949099 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 261-423 |
| Cow position: | chr29:37293054-37293221 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 261-430 |
| Cow position: | chr29:415034-415204 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 78, 66 |
| Conread position: | 265-432 |
| Cow position: | chr29:10818431-10818257 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 124 |
| Conread position: | 266-428 |
| Cow position: | chr29:936227-936402 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 275-431 |
| Cow position: | chr29:24660717-24660879 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 87, 70 |
| Conread position: | 276-431 |
| Cow position: | chr29:7414534-7414696 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 277-431 |
| Cow position: | chr29:12440815-12440965 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 120, 44 |
| Conread position: | 296-431 |
| Cow position: | chr29:22736416-22736556 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 297-427 |
| Cow position: | chr29:25669148-25669281 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 298-444 |
| Cow position: | chr29:44985327-44985476 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 74, 13 |
| Conread position: | 315-436 |
| Cow position: | chr29:31378164-31378291 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.