Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8021F04.5
        

               Conread position:
               481-862
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               483-768
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               132, 73
               

               Conread position:
               489-768
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               13, 51
               

               Conread position:
               499-769
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               92, 28
               

               Conread position:
               501-701
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               97, 166
               

               Conread position:
               501-759
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 57
               

               Conread position:
               501-907
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 129
               

               Conread position:
               501-923
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 21
               

               Conread position:
               501-924
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 11
               

               Conread position:
               504-735
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               94, 49
               

               Conread position:
               504-743
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               95, 49
               

               Conread position:
               504-766
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               44, 34
               

               Conread position:
               504-768
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               200
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               95, 163
               

               Conread position:
               505-768
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               92, 159
               

               Conread position:
               505-924
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               93, 221
               

               Conread position:
               505-924
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               305
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               94, 207
               

               Conread position:
               506-705
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 72
               

               Conread position:
               510-766
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               512-924
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 127
               

               Conread position:
               514-797
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               101, 73
               

               Conread position:
               514-864
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 149
               

               Conread position:
               514-924
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 152
               

               Conread position:
               514-924
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 25
               

               Conread position:
               514-924
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 264
               

               Conread position:
               515-759
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               64, 70
               

               Conread position:
               515-759
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               99, 23
               

               Conread position:
               515-759
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               100, 75
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               159, 40
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               100, 42
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               100, 84
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               91, 73
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 58
               

               Conread position:
               515-768
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               112, 103
               

               Conread position:
               515-912
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               100, 75
               

               Conread position:
               515-924
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               101, 75
               

               Conread position:
               516-767
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               54, 120
               

               Conread position:
               517-759
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               99, 73
               

               Conread position:
               517-760
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               98, 73
               

               Conread position:
               520-760
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               104, 78
               

               Conread position:
               520-829
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               78, 147
               

               Conread position:
               520-918
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 117
               

               Conread position:
               520-918
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 120
               

               Conread position:
               523-904
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 300
               

               Conread position:
               524-768
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               92, 40
               

               Conread position:
               525-760
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               90, 83
               

               Conread position:
               525-873
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               63, 205
               

               Conread position:
               533-815
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               68, 30
               

               Conread position:
               538-759
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               77, 52
               

               Conread position:
               538-760
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               76, 52
               

               Conread position:
               557-759
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 49
               

               Conread position:
               558-759
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               590-864
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               263, 188
               

               Conread position:
               597-768
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               600-768
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               15, 112
               

               Conread position:
               614-767
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 19
               

               Conread position:
               614-924
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               61, 214
               

               Conread position:
               616-924
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               60, 17
               

               Conread position:
               617-864
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               10, 165
               

               Conread position:
               622-768
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 67
               

               Conread position:
               640-774
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               641-872
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 187
               

               Conread position:
               647-924
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               655-768
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               695-872
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               97, 121
               

               Conread position:
               788-924
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               131, 29
               
Show alignments to all cow chromosomes.