Cow genome map

Conread name: Ss1.1-Pig3-SRG8021F04.5

Conread position: 481-862
Cow position: chr1:69703225-69702844 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 271
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 17, 9

Conread position: 483-768
Cow position: chr1:13992689-13992411 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 132, 73

Conread position: 489-768
Cow position: chr1:65187903-65187617 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 13, 51

Conread position: 499-769
Cow position: chr1:84760465-84760738 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 92, 28

Conread position: 501-701
Cow position: chr1:80275627-80275832 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 97, 166

Conread position: 501-759
Cow position: chr1:31978839-31979102 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 57

Conread position: 501-907
Cow position: chr1:89915984-89915592 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 129

Conread position: 501-923
Cow position: chr1:6968854-6968436 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 21

Conread position: 501-924
Cow position: chr1:81454662-81454238 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 11

Conread position: 504-735
Cow position: chr1:93244926-93244690 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 49

Conread position: 504-743
Cow position: chr1:64753525-64753277 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 95, 49

Conread position: 504-766
Cow position: chr1:24509715-24509449 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 34

Conread position: 504-768
Cow position: chr1:85000647-85000916 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 95, 163

Conread position: 505-768
Cow position: chr1:81491568-81491302 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 92, 159

Conread position: 505-924
Cow position: chr1:57357506-57357099 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 295
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 93, 221

Conread position: 505-924
Cow position: chr1:88972987-88973411 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 305
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 94, 207

Conread position: 506-705
Cow position: chr1:14169297-14169493 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 72

Conread position: 510-766
Cow position: chr1:83321413-83321681 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 87, 0

Conread position: 512-924
Cow position: chr1:60860352-60859932 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 127

Conread position: 514-797
Cow position: chr1:13314169-13313882 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 101, 73

Conread position: 514-864
Cow position: chr1:20806900-20807248 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 149

Conread position: 514-924
Cow position: chr1:23086294-23086704 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 152

Conread position: 514-924
Cow position: chr1:61553978-61554388 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 25

Conread position: 514-924
Cow position: chr1:92709239-92708842 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 264

Conread position: 515-759
Cow position: chr1:6309216-6309459 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 70

Conread position: 515-759
Cow position: chr1:24763760-24764002 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 99, 23

Conread position: 515-759
Cow position: chr1:67902056-67902299 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 100, 75

Conread position: 515-760
Cow position: chr1:33914103-33914333 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 159, 40

Conread position: 515-760
Cow position: chr1:71087122-71086877 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 100, 42

Conread position: 515-760
Cow position: chr1:89407230-89407469 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 84

Conread position: 515-760
Cow position: chr1:94744960-94744715 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 91, 73

Conread position: 515-760
Cow position: chr1:94761262-94761499 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 58

Conread position: 515-768
Cow position: chr1:4279527-4279784 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 112, 103

Conread position: 515-912
Cow position: chr1:100046175-100045789 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 266
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 100, 75

Conread position: 515-924
Cow position: chr1:46389403-46389003 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 282
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 101, 75

Conread position: 516-767
Cow position: chr1:55114781-55114525 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 54, 120

Conread position: 517-759
Cow position: chr1:100397658-100397420 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 99, 73

Conread position: 517-760
Cow position: chr1:94754222-94753977 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 98, 73

Conread position: 520-760
Cow position: chr1:43588731-43588495 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 104, 78

Conread position: 520-829
Cow position: chr1:90845315-90845623 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 78, 147

Conread position: 520-918
Cow position: chr1:31126750-31127153 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 117

Conread position: 520-918
Cow position: chr1:57854592-57854187 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 120

Conread position: 523-904
Cow position: chr1:17092500-17092111 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 300

Conread position: 524-768
Cow position: chr1:93392077-93391840 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 92, 40

Conread position: 525-760
Cow position: chr1:15983647-15983879 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 90, 83

Conread position: 525-873
Cow position: chr1:14382942-14383286 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 205

Conread position: 533-815
Cow position: chr1:20264473-20264764 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 68, 30

Conread position: 538-759
Cow position: chr1:7489108-7489328 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 77, 52

Conread position: 538-760
Cow position: chr1:70171418-70171639 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 76, 52

Conread position: 557-759
Cow position: chr1:24684292-24684496 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 49

Conread position: 558-759
Cow position: chr1:35544313-35544516 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 49

Conread position: 590-864
Cow position: chr1:8146834-8147104 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 263, 188

Conread position: 597-768
Cow position: chr1:57893454-57893278 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 600-768
Cow position: chr1:57562975-57562805 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 112

Conread position: 614-767
Cow position: chr1:80174893-80175048 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 19

Conread position: 614-924
Cow position: chr1:13680989-13681308 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 61, 214

Conread position: 616-924
Cow position: chr1:23920802-23921106 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 60, 17

Conread position: 617-864
Cow position: chr1:4264630-4264875 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 10, 165

Conread position: 622-768
Cow position: chr1:86643055-86643201 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 67

Conread position: 640-774
Cow position: chr1:83390622-83390761 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 641-872
Cow position: chr1:70178260-70178026 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 187

Conread position: 647-924
Cow position: chr1:41607423-41607143 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 11

Conread position: 655-768
Cow position: chr1:94409060-94409176 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 695-872
Cow position: chr1:78259326-78259500 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 121

Conread position: 788-924
Cow position: chr1:77376915-77376781 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 131, 29

Show alignments to all cow chromosomes.