Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8021F04.5
        

               Conread position:
               497-924
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               302
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               101, 56
               

               Conread position:
               499-873
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 40
               

               Conread position:
               501-912
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 89
               

               Conread position:
               501-924
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 335
               

               Conread position:
               502-890
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 17
               

               Conread position:
               504-745
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               95, 49
               

               Conread position:
               504-767
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               110, 86
               

               Conread position:
               504-797
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               95, 158
               

               Conread position:
               504-858
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 35
               

               Conread position:
               504-924
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 34
               

               Conread position:
               504-924
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               94, 112
               

               Conread position:
               505-722
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               58, 49
               

               Conread position:
               505-760
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               105, 84
               

               Conread position:
               505-768
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               70, 166
               

               Conread position:
               505-768
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               38, 163
               

               Conread position:
               506-771
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               169, 85
               

               Conread position:
               507-699
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 47
               

               Conread position:
               510-760
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               105, 80
               

               Conread position:
               512-748
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               21, 28
               

               Conread position:
               514-722
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 40
               

               Conread position:
               514-760
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               49, 152
               

               Conread position:
               514-776
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               77, 114
               

               Conread position:
               514-912
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 76
               

               Conread position:
               514-918
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 26
               

               Conread position:
               515-686
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               99, 74
               

               Conread position:
               515-693
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               101, 85
               

               Conread position:
               515-700
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               515-759
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               92, 75
               

               Conread position:
               515-759
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               100, 76
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               91, 74
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               99, 12
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               100, 75
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               100, 91
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               159, 87
               

               Conread position:
               515-912
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               73, 126
               

               Conread position:
               515-915
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               276
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               100, 75
               

               Conread position:
               515-924
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 219
               

               Conread position:
               515-924
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               283
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               86, 207
               

               Conread position:
               516-760
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               99, 82
               

               Conread position:
               517-924
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 122
               

               Conread position:
               518-913
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 152
               

               Conread position:
               518-924
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               281
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               67, 101
               

               Conread position:
               520-759
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               95, 75
               

               Conread position:
               520-760
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               154, 86
               

               Conread position:
               524-743
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               78, 28
               

               Conread position:
               531-768
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 108
               

               Conread position:
               538-760
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               77, 68
               

               Conread position:
               538-771
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               77, 52
               

               Conread position:
               542-924
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 242
               

               Conread position:
               552-924
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 44
               

               Conread position:
               557-759
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               58, 49
               

               Conread position:
               602-924
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               633-924
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 25
               

               Conread position:
               640-873
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               34, 122
               

               Conread position:
               645-774
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 0
               
Show alignments to all cow chromosomes.