Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8021F04.5 |
| Conread position: | 481-760 |
| Cow position: | chr17:23907360-23907076 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 494-924 |
| Cow position: | chr17:21342566-21343001 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 89 |
| Conread position: | 501-824 |
| Cow position: | chr17:24566186-24566511 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 98, 39 |
| Conread position: | 501-863 |
| Cow position: | chr17:6003279-6002927 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 97, 139 |
| Conread position: | 501-924 |
| Cow position: | chr17:5821324-5820889 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 15 |
| Conread position: | 501-924 |
| Cow position: | chr17:22460431-22460862 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 223 |
| Conread position: | 504-745 |
| Cow position: | chr17:15919312-15919554 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 504-768 |
| Cow position: | chr17:10851325-10851593 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 44, 35 |
| Conread position: | 505-760 |
| Cow position: | chr17:25103493-25103754 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 96, 162 |
| Conread position: | 509-738 |
| Cow position: | chr17:24862229-24862468 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 512-767 |
| Cow position: | chr17:36205179-36204914 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 514-924 |
| Cow position: | chr17:42794129-42793714 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 63 |
| Conread position: | 515-760 |
| Cow position: | chr17:24993461-24993705 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 100, 80 |
| Conread position: | 515-847 |
| Cow position: | chr17:23463866-23463523 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 68 |
| Conread position: | 515-918 |
| Cow position: | chr17:34041101-34040702 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 123 |
| Conread position: | 515-918 |
| Cow position: | chr17:41409944-41410328 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 84, 115 |
| Conread position: | 517-760 |
| Cow position: | chr17:30681467-30681235 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 73 |
| Conread position: | 517-915 |
| Cow position: | chr17:10549321-10548937 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 275 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 64, 118 |
| Conread position: | 520-759 |
| Cow position: | chr17:45798483-45798718 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 14, 54 |
| Conread position: | 524-912 |
| Cow position: | chr17:44691584-44691952 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 136, 41 |
| Conread position: | 527-759 |
| Cow position: | chr17:18597237-18597001 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 12, 137 |
| Conread position: | 527-922 |
| Cow position: | chr17:35129968-35129589 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 72, 137 |
| Conread position: | 528-693 |
| Cow position: | chr17:6992954-6992783 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 5, 110 |
| Conread position: | 545-767 |
| Cow position: | chr17:34377496-34377726 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 93 |
| Conread position: | 546-768 |
| Cow position: | chr17:21921029-21920801 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 53, 167 |
| Conread position: | 552-769 |
| Cow position: | chr17:5719343-5719120 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 45, 67 |
| Conread position: | 597-768 |
| Cow position: | chr17:25650806-25650632 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 18, 55 |
| Conread position: | 597-768 |
| Cow position: | chr17:38043832-38043657 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 614-873 |
| Cow position: | chr17:23468331-23468072 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 176, 23 |
| Conread position: | 633-766 |
| Cow position: | chr17:11075853-11075989 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 645-775 |
| Cow position: | chr17:45884700-45884572 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 650-760 |
| Cow position: | chr17:11293118-11293004 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.