Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8021F04.5 |
| Conread position: | 497-918 |
| Cow position: | chr19:56007252-56007670 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 102, 56 |
| Conread position: | 498-924 |
| Cow position: | chr19:19766705-19767151 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 281 |
| Conread position: | 504-745 |
| Cow position: | chr19:27833491-27833242 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 57, 50 |
| Conread position: | 504-745 |
| Cow position: | chr19:47321215-47320978 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 111, 104 |
| Conread position: | 514-915 |
| Cow position: | chr19:22165767-22166149 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 59 |
| Conread position: | 515-760 |
| Cow position: | chr19:20417539-20417786 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 77 |
| Conread position: | 515-760 |
| Cow position: | chr19:45590217-45590463 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 100, 69 |
| Conread position: | 515-768 |
| Cow position: | chr19:11434069-11433795 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 83, 256 |
| Conread position: | 515-769 |
| Cow position: | chr19:18628852-18629116 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 515-912 |
| Cow position: | chr19:51938432-51938810 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 100, 86 |
| Conread position: | 515-924 |
| Cow position: | chr19:10366965-10367366 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 70 |
| Conread position: | 520-760 |
| Cow position: | chr19:9080245-9080481 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 95, 33 |
| Conread position: | 520-842 |
| Cow position: | chr19:51979980-51980301 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 118 |
| Conread position: | 520-888 |
| Cow position: | chr19:54414863-54415243 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 63 |
| Conread position: | 520-912 |
| Cow position: | chr19:34244693-34245090 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 268 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 68, 20 |
| Conread position: | 521-760 |
| Cow position: | chr19:12124876-12124632 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 58, 52 |
| Conread position: | 521-767 |
| Cow position: | chr19:8770622-8770873 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 67, 119 |
| Conread position: | 522-924 |
| Cow position: | chr19:19764209-19764610 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 244 |
| Conread position: | 523-768 |
| Cow position: | chr19:7581412-7581665 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 547-766 |
| Cow position: | chr19:24225690-24225925 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 91 |
| Conread position: | 553-873 |
| Cow position: | chr19:26017438-26017737 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 46, 112 |
| Conread position: | 597-806 |
| Cow position: | chr19:43240452-43240240 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 18, 129 |
| Conread position: | 597-911 |
| Cow position: | chr19:55123489-55123803 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 17, 32 |
| Conread position: | 629-922 |
| Cow position: | chr19:7591747-7592032 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 650-924 |
| Cow position: | chr19:13249354-13249634 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 25, 125 |
| Conread position: | 655-760 |
| Cow position: | chr19:29957957-29957848 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 673-865 |
| Cow position: | chr19:53838023-53837832 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 117, 143 |
Show alignments to all cow chromosomes.