Cow genome map

Conread name: Ss1.1-Pig3-SRG8021F04.5

Conread position: 496-924
Cow position: chr2:86327260-86326820 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 296
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 52, 43

Conread position: 501-716
Cow position: chr2:32893207-32892983 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 38

Conread position: 501-759
Cow position: chr2:82293951-82293699 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 114, 13

Conread position: 501-768
Cow position: chr2:40021375-40021101 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 38

Conread position: 501-775
Cow position: chr2:35453113-35453394 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 98, 52

Conread position: 501-873
Cow position: chr2:29191598-29191969 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 255
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 85, 56

Conread position: 501-890
Cow position: chr2:35984847-35984454 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 120

Conread position: 501-924
Cow position: chr2:81185679-81186101 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 68

Conread position: 503-781
Cow position: chr2:12565916-12565630 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 9

Conread position: 504-692
Cow position: chr2:45934661-45934472 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 95, 35

Conread position: 504-700
Cow position: chr2:65721381-65721180 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 35

Conread position: 504-745
Cow position: chr2:7293118-7293367 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 95, 49

Conread position: 504-745
Cow position: chr2:16800273-16800024 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 95, 49

Conread position: 504-745
Cow position: chr2:41586364-41586119 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 83, 49

Conread position: 504-745
Cow position: chr2:46772502-46772751 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 95, 49

Conread position: 504-760
Cow position: chr2:56300288-56300550 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 58

Conread position: 504-768
Cow position: chr2:36855049-36855315 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 84, 35

Conread position: 504-768
Cow position: chr2:46565290-46565020 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 95, 0

Conread position: 504-924
Cow position: chr2:85383603-85383176 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 157

Conread position: 505-774
Cow position: chr2:44683532-44683801 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 110, 96

Conread position: 505-912
Cow position: chr2:69131411-69130985 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 339

Conread position: 505-919
Cow position: chr2:45927970-45927552 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 34

Conread position: 512-768
Cow position: chr2:29418408-29418664 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 103, 77

Conread position: 512-858
Cow position: chr2:40853067-40853416 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 36, 27

Conread position: 514-701
Cow position: chr2:39871420-39871613 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 514-754
Cow position: chr2:46566560-46566809 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 85, 12

Conread position: 514-759
Cow position: chr2:28915908-28916150 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 101, 76

Conread position: 514-760
Cow position: chr2:46567268-46567017 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 85, 149

Conread position: 514-766
Cow position: chr2:47150177-47149918 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 85, 43

Conread position: 514-768
Cow position: chr2:21336275-21336531 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 85

Conread position: 514-768
Cow position: chr2:25375587-25375847 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 151

Conread position: 514-914
Cow position: chr2:44972420-44972793 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 278
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 85, 56

Conread position: 514-924
Cow position: chr2:39255035-39255425 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 292
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 85, 49

Conread position: 514-924
Cow position: chr2:41779284-41778871 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 151

Conread position: 515-692
Cow position: chr2:44689643-44689467 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 99, 74

Conread position: 515-737
Cow position: chr2:9393932-9393717 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 159, 92

Conread position: 515-750
Cow position: chr2:69134057-69133818 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 84, 59

Conread position: 515-759
Cow position: chr2:12693006-12693249 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 100, 74

Conread position: 515-759
Cow position: chr2:19741024-19741267 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 75

Conread position: 515-759
Cow position: chr2:68349743-68349986 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 75

Conread position: 515-759
Cow position: chr2:82301657-82301415 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 39

Conread position: 515-760
Cow position: chr2:1479961-1479718 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 100, 93

Conread position: 515-760
Cow position: chr2:3472617-3472373 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 100, 75

Conread position: 515-760
Cow position: chr2:20910117-20910372 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 126

Conread position: 515-760
Cow position: chr2:43335032-43334785 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 100, 91

Conread position: 515-760
Cow position: chr2:64658174-64657930 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 100, 52

Conread position: 515-760
Cow position: chr2:68157836-68157594 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 99, 74

Conread position: 515-768
Cow position: chr2:44039518-44039768 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 95, 85

Conread position: 515-769
Cow position: chr2:24508639-24508905 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 84, 0

Conread position: 515-771
Cow position: chr2:33630908-33630652 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 104, 121

Conread position: 515-782
Cow position: chr2:12768342-12768073 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 99, 83

Conread position: 515-912
Cow position: chr2:85009684-85010084 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 104

Conread position: 516-700
Cow position: chr2:83145239-83145055 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 72, 55

Conread position: 517-760
Cow position: chr2:37365918-37366168 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 31, 22

Conread position: 517-918
Cow position: chr2:66670869-66671275 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 312

Conread position: 520-760
Cow position: chr2:7316593-7316832 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 95, 70

Conread position: 520-760
Cow position: chr2:47554024-47554262 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 56, 37

Conread position: 520-768
Cow position: chr2:49909418-49909170 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 134

Conread position: 520-912
Cow position: chr2:15263846-15263462 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 95, 62

Conread position: 550-924
Cow position: chr2:40299875-40299517 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 256
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 65, 56

Conread position: 557-756
Cow position: chr2:44980007-44979806 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 49

Conread position: 562-768
Cow position: chr2:44546716-44546921 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 112, 28

Conread position: 567-912
Cow position: chr2:9946990-9946649 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 21, 70

Conread position: 597-768
Cow position: chr2:80805096-80804920 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 597-769
Cow position: chr2:23043612-23043436 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 597-924
Cow position: chr2:68426733-68427060 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 17

Conread position: 616-768
Cow position: chr2:34292846-34293001 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 625-912
Cow position: chr2:35971636-35971353 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 50, 8

Conread position: 630-769
Cow position: chr2:36417150-36417292 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 646-760
Cow position: chr2:20909354-20909237 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 654-911
Cow position: chr2:46205029-46204777 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 20, 114

Conread position: 691-924
Cow position: chr2:83144834-83144608 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 20

Conread position: 699-924
Cow position: chr2:39878111-39878325 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 93, 75

Conread position: 707-924
Cow position: chr2:37079821-37080035 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 77

Show alignments to all cow chromosomes.