Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8021F04.5
        

               Conread position:
               496-924
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               296
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               52, 43
               

               Conread position:
               501-716
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               47, 38
               

               Conread position:
               501-759
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               114, 13
               

               Conread position:
               501-768
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               47, 38
               

               Conread position:
               501-775
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               98, 52
               

               Conread position:
               501-873
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               85, 56
               

               Conread position:
               501-890
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 120
               

               Conread position:
               501-924
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 68
               

               Conread position:
               503-781
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               45, 9
               

               Conread position:
               504-692
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               504-700
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 35
               

               Conread position:
               504-745
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               95, 49
               

               Conread position:
               504-745
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               95, 49
               

               Conread position:
               504-745
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               83, 49
               

               Conread position:
               504-745
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               95, 49
               

               Conread position:
               504-760
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               504-768
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               84, 35
               

               Conread position:
               504-768
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               504-924
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 157
               

               Conread position:
               505-774
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               110, 96
               

               Conread position:
               505-912
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 339
               

               Conread position:
               505-919
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 34
               

               Conread position:
               512-768
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               103, 77
               

               Conread position:
               512-858
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               249
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               36, 27
               

               Conread position:
               514-701
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               514-754
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               514-759
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               101, 76
               

               Conread position:
               514-760
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               85, 149
               

               Conread position:
               514-766
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               85, 43
               

               Conread position:
               514-768
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 85
               

               Conread position:
               514-768
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 151
               

               Conread position:
               514-914
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               278
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               85, 56
               

               Conread position:
               514-924
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               292
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               85, 49
               

               Conread position:
               514-924
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 151
               

               Conread position:
               515-692
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               99, 74
               

               Conread position:
               515-737
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               159, 92
               

               Conread position:
               515-750
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               84, 59
               

               Conread position:
               515-759
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               100, 74
               

               Conread position:
               515-759
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               100, 75
               

               Conread position:
               515-759
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               100, 75
               

               Conread position:
               515-759
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               100, 93
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               100, 75
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               74, 126
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               100, 91
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               100, 52
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               99, 74
               

               Conread position:
               515-768
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               95, 85
               

               Conread position:
               515-769
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               515-771
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               104, 121
               

               Conread position:
               515-782
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               99, 83
               

               Conread position:
               515-912
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 104
               

               Conread position:
               516-700
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               72, 55
               

               Conread position:
               517-760
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               517-918
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 312
               

               Conread position:
               520-760
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               95, 70
               

               Conread position:
               520-760
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               520-768
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               79, 134
               

               Conread position:
               520-912
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               273
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               95, 62
               

               Conread position:
               550-924
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               65, 56
               

               Conread position:
               557-756
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               58, 49
               

               Conread position:
               562-768
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               112, 28
               

               Conread position:
               567-912
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               21, 70
               

               Conread position:
               597-768
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               597-769
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               597-924
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 17
               

               Conread position:
               616-768
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               625-912
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               212
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               50, 8
               

               Conread position:
               630-769
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               646-760
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               654-911
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               20, 114
               

               Conread position:
               691-924
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               98, 20
               

               Conread position:
               699-924
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               93, 75
               

               Conread position:
               707-924
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               82, 77
               
Show alignments to all cow chromosomes.