Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8021F04.5 |
| Conread position: | 494-737 |
| Cow position: | chr22:4998083-4997833 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 499-912 |
| Cow position: | chr22:674405-674824 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 131 |
| Conread position: | 501-766 |
| Cow position: | chr22:6437819-6438089 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 98, 146 |
| Conread position: | 501-768 |
| Cow position: | chr22:6702570-6702848 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 97, 153 |
| Conread position: | 501-912 |
| Cow position: | chr22:35531145-35530750 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 44 |
| Conread position: | 501-918 |
| Cow position: | chr22:2527471-2527068 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 293 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 97, 166 |
| Conread position: | 501-924 |
| Cow position: | chr22:19093066-19093487 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 215 |
| Conread position: | 502-924 |
| Cow position: | chr22:2002084-2002534 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 504-721 |
| Cow position: | chr22:42035778-42035547 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 136 |
| Conread position: | 504-767 |
| Cow position: | chr22:17310763-17310490 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 505-757 |
| Cow position: | chr22:1610720-1610974 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 73, 79 |
| Conread position: | 505-906 |
| Cow position: | chr22:27747885-27748295 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 321 |
| Conread position: | 507-768 |
| Cow position: | chr22:17363457-17363193 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 108, 55 |
| Conread position: | 514-767 |
| Cow position: | chr22:19971342-19971080 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 515-759 |
| Cow position: | chr22:12677410-12677653 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 159, 75 |
| Conread position: | 515-760 |
| Cow position: | chr22:30911906-30912153 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 100, 42 |
| Conread position: | 515-767 |
| Cow position: | chr22:734907-735157 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 64, 75 |
| Conread position: | 515-767 |
| Cow position: | chr22:27076712-27076963 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 100, 75 |
| Conread position: | 515-873 |
| Cow position: | chr22:17926717-17926350 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 25 |
| Conread position: | 515-912 |
| Cow position: | chr22:303068-302690 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 284 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 34, 113 |
| Conread position: | 515-924 |
| Cow position: | chr22:8121551-8121152 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 72 |
| Conread position: | 517-720 |
| Cow position: | chr22:44457288-44457490 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 72 |
| Conread position: | 517-760 |
| Cow position: | chr22:31381506-31381263 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 98, 73 |
| Conread position: | 517-760 |
| Cow position: | chr22:41501397-41501152 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 97, 89 |
| Conread position: | 520-700 |
| Cow position: | chr22:17874015-17874202 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 78, 68 |
| Conread position: | 520-752 |
| Cow position: | chr22:743856-744083 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 520-759 |
| Cow position: | chr22:8033695-8033457 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 95, 70 |
| Conread position: | 520-759 |
| Cow position: | chr22:8040931-8040699 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 153, 30 |
| Conread position: | 520-760 |
| Cow position: | chr22:41685424-41685182 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 68, 84 |
| Conread position: | 520-767 |
| Cow position: | chr22:2941995-2941749 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 96, 70 |
| Conread position: | 521-746 |
| Cow position: | chr22:39459262-39459026 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 532-719 |
| Cow position: | chr22:39503264-39503459 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 532-846 |
| Cow position: | chr22:18993729-18994049 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 67, 132 |
| Conread position: | 596-768 |
| Cow position: | chr22:18698626-18698450 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 597-924 |
| Cow position: | chr22:8133698-8133381 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 603-767 |
| Cow position: | chr22:10627473-10627641 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 618-918 |
| Cow position: | chr22:28401373-28401674 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 174, 28 |
Show alignments to all cow chromosomes.