Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8021F04.5 |
| Conread position: | 496-768 |
| Cow position: | chr24:318905-319193 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 7, 156 |
| Conread position: | 501-737 |
| Cow position: | chr24:2448080-2448324 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 97, 141 |
| Conread position: | 501-924 |
| Cow position: | chr24:31204051-31203606 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 170 |
| Conread position: | 503-746 |
| Cow position: | chr24:246185-245945 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 112, 42 |
| Conread position: | 503-760 |
| Cow position: | chr24:36906388-36906129 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 111, 12 |
| Conread position: | 504-745 |
| Cow position: | chr24:5917600-5917351 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 49 |
| Conread position: | 504-751 |
| Cow position: | chr24:29356255-29356000 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 94, 49 |
| Conread position: | 505-839 |
| Cow position: | chr24:6073305-6073643 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 96, 166 |
| Conread position: | 505-924 |
| Cow position: | chr24:17845207-17844778 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 328 |
| Conread position: | 514-766 |
| Cow position: | chr24:35553277-35553024 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 85, 150 |
| Conread position: | 514-915 |
| Cow position: | chr24:9167199-9166812 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 515-759 |
| Cow position: | chr24:9096349-9096106 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 159, 75 |
| Conread position: | 515-760 |
| Cow position: | chr24:23686405-23686647 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 100, 26 |
| Conread position: | 515-924 |
| Cow position: | chr24:6088914-6089328 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 145 |
| Conread position: | 516-760 |
| Cow position: | chr24:2120993-2121236 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 158, 84 |
| Conread position: | 518-737 |
| Cow position: | chr24:36836203-36836428 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 83, 35 |
| Conread position: | 520-692 |
| Cow position: | chr24:26874628-26874448 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 520-890 |
| Cow position: | chr24:27332883-27333251 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 141 |
| Conread position: | 520-924 |
| Cow position: | chr24:26680542-26680149 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 68, 117 |
| Conread position: | 520-924 |
| Cow position: | chr24:27254031-27254437 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 97 |
| Conread position: | 523-918 |
| Cow position: | chr24:42009055-42009452 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 114 |
| Conread position: | 531-725 |
| Cow position: | chr24:20260160-20260349 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 84, 59 |
| Conread position: | 617-760 |
| Cow position: | chr24:17973113-17972967 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 644-768 |
| Cow position: | chr24:33446151-33446276 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 673-924 |
| Cow position: | chr24:24646071-24646320 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 119, 66 |
Show alignments to all cow chromosomes.