Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8021F04.5 |
| Conread position: | 501-768 |
| Cow position: | chr28:29984941-29984677 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 99, 211 |
| Conread position: | 501-904 |
| Cow position: | chr28:30946735-30947138 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 276 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 114, 101 |
| Conread position: | 501-912 |
| Cow position: | chr28:19105745-19106163 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 98 |
| Conread position: | 505-718 |
| Cow position: | chr28:5341243-5341018 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 505-924 |
| Cow position: | chr28:22969308-22968891 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 68 |
| Conread position: | 515-704 |
| Cow position: | chr28:4129957-4130153 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 84, 118 |
| Conread position: | 515-756 |
| Cow position: | chr28:513913-513673 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 100, 75 |
| Conread position: | 515-758 |
| Cow position: | chr28:28730669-28730912 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 109, 118 |
| Conread position: | 515-759 |
| Cow position: | chr28:91840-91597 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 100, 75 |
| Conread position: | 515-759 |
| Cow position: | chr28:13771324-13771564 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 100, 17 |
| Conread position: | 515-767 |
| Cow position: | chr28:80733-80482 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 100, 75 |
| Conread position: | 515-767 |
| Cow position: | chr28:23799066-23798821 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 159, 75 |
| Conread position: | 515-768 |
| Cow position: | chr28:7238855-7239117 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 520-755 |
| Cow position: | chr28:74611-74377 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 94, 70 |
| Conread position: | 522-915 |
| Cow position: | chr28:32649368-32648966 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 531-924 |
| Cow position: | chr28:2370478-2370875 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 100 |
| Conread position: | 545-826 |
| Cow position: | chr28:4547728-4547441 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 94 |
| Conread position: | 597-768 |
| Cow position: | chr28:17529122-17529294 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 597-768 |
| Cow position: | chr28:23344575-23344399 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 600-748 |
| Cow position: | chr28:9417647-9417495 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 710-918 |
| Cow position: | chr28:25588498-25588293 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 82, 95 |
| Conread position: | 735-924 |
| Cow position: | chr28:33262083-33262271 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 59, 83 |
Show alignments to all cow chromosomes.