Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8021F04.5
        

               Conread position:
               461-763
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               154, 35
               

               Conread position:
               501-723
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               501-768
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               95, 160
               

               Conread position:
               501-768
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               97, 56
               

               Conread position:
               501-898
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               286
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               97, 281
               

               Conread position:
               501-905
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 282
               

               Conread position:
               501-912
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 91
               

               Conread position:
               501-918
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 154
               

               Conread position:
               501-924
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 138
               

               Conread position:
               504-745
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               95, 8
               

               Conread position:
               504-751
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               58, 13
               

               Conread position:
               504-760
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 100
               

               Conread position:
               505-745
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               75, 176
               

               Conread position:
               505-760
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               49, 102
               

               Conread position:
               505-873
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 35
               

               Conread position:
               505-912
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               290
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               83, 128
               

               Conread position:
               505-924
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               290
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               96, 135
               

               Conread position:
               510-753
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               88, 238
               

               Conread position:
               512-768
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               87, 71
               

               Conread position:
               513-900
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               514-866
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 69
               

               Conread position:
               514-918
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 69
               

               Conread position:
               515-701
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               99, 33
               

               Conread position:
               515-704
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               99, 74
               

               Conread position:
               515-755
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               102, 75
               

               Conread position:
               515-759
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               100, 75
               

               Conread position:
               515-759
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               100, 75
               

               Conread position:
               515-759
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               99, 74
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               100, 74
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               159, 91
               

               Conread position:
               515-760
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               100, 75
               

               Conread position:
               515-766
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               515-767
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               95, 75
               

               Conread position:
               515-767
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               99, 74
               

               Conread position:
               515-767
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               100, 74
               

               Conread position:
               515-768
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               33, 159
               

               Conread position:
               517-924
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 40
               

               Conread position:
               520-730
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               68, 117
               

               Conread position:
               520-760
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               94, 79
               

               Conread position:
               520-760
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               95, 71
               

               Conread position:
               520-767
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               68, 118
               

               Conread position:
               520-846
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               114, 86
               

               Conread position:
               520-873
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 250
               

               Conread position:
               520-873
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 71
               

               Conread position:
               520-913
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 120
               

               Conread position:
               521-760
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               12, 70
               

               Conread position:
               522-760
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               93, 86
               

               Conread position:
               523-737
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               56, 62
               

               Conread position:
               523-768
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               523-811
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               76, 60
               

               Conread position:
               525-760
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               74, 139
               

               Conread position:
               557-760
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               58, 44
               

               Conread position:
               562-760
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 44
               

               Conread position:
               562-762
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               53, 44
               

               Conread position:
               600-745
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               604-767
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               92, 24
               

               Conread position:
               626-768
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               49, 13
               

               Conread position:
               631-767
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               632-892
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 136
               

               Conread position:
               641-769
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 112
               

               Conread position:
               641-906
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               645-767
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               652-913
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               8, 119
               

               Conread position:
               659-899
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               16, 99
               
Show alignments to all cow chromosomes.