Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8021F04.5 |
| Conread position: | 485-768 |
| Cow position: | chr7:25828988-25828698 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 488-699 |
| Cow position: | chr7:16140275-16140054 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 18 |
| Conread position: | 501-759 |
| Cow position: | chr7:5015266-5015011 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 114, 13 |
| Conread position: | 501-768 |
| Cow position: | chr7:30544535-30544811 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 504-745 |
| Cow position: | chr7:3661957-3662206 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 95, 49 |
| Conread position: | 504-745 |
| Cow position: | chr7:18107649-18107893 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 95, 49 |
| Conread position: | 504-768 |
| Cow position: | chr7:31108066-31108329 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 93, 53 |
| Conread position: | 506-918 |
| Cow position: | chr7:38470633-38470222 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 60 |
| Conread position: | 512-924 |
| Cow position: | chr7:40909518-40909941 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 514-768 |
| Cow position: | chr7:2753298-2753039 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 83, 76 |
| Conread position: | 514-924 |
| Cow position: | chr7:161346-161766 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 312 |
| Conread position: | 514-924 |
| Cow position: | chr7:33596814-33597234 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 324 |
| Conread position: | 514-924 |
| Cow position: | chr7:50718664-50718242 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 68 |
| Conread position: | 514-924 |
| Cow position: | chr7:50754552-50754946 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 85, 69 |
| Conread position: | 515-704 |
| Cow position: | chr7:21834267-21834458 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 99, 84 |
| Conread position: | 515-746 |
| Cow position: | chr7:23349751-23349977 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 100, 38 |
| Conread position: | 515-755 |
| Cow position: | chr7:62014710-62014948 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 100, 91 |
| Conread position: | 515-759 |
| Cow position: | chr7:49058509-49058752 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 100, 74 |
| Conread position: | 515-760 |
| Cow position: | chr7:57380185-57380438 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 84, 124 |
| Conread position: | 515-768 |
| Cow position: | chr7:40899896-40900151 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 101, 62 |
| Conread position: | 515-911 |
| Cow position: | chr7:66164489-66164873 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 270 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 100, 75 |
| Conread position: | 515-924 |
| Cow position: | chr7:51755893-51756296 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 83, 128 |
| Conread position: | 516-924 |
| Cow position: | chr7:38810854-38811250 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 263 |
| Conread position: | 520-760 |
| Cow position: | chr7:55974902-55975137 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 95, 20 |
| Conread position: | 520-912 |
| Cow position: | chr7:38470127-38469729 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 118 |
| Conread position: | 520-924 |
| Cow position: | chr7:9349119-9348715 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 285 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 68, 234 |
| Conread position: | 522-768 |
| Cow position: | chr7:12266338-12266078 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 75, 119 |
| Conread position: | 526-924 |
| Cow position: | chr7:25804977-25804573 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 32, 240 |
| Conread position: | 547-760 |
| Cow position: | chr7:47886434-47886660 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 52, 198 |
| Conread position: | 552-768 |
| Cow position: | chr7:37293216-37293426 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 36, 108 |
| Conread position: | 597-852 |
| Cow position: | chr7:11157891-11157629 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 18, 47 |
| Conread position: | 600-795 |
| Cow position: | chr7:12452599-12452401 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 602-810 |
| Cow position: | chr7:19930114-19929907 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 641-919 |
| Cow position: | chr7:63334724-63334442 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 124 |
| Conread position: | 673-912 |
| Cow position: | chr7:41084542-41084301 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 119, 88 |
| Conread position: | 689-873 |
| Cow position: | chr7:43182329-43182514 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 71, 128 |
Show alignments to all cow chromosomes.