Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8021F04.5 |
| Conread position: | 488-722 |
| Cow position: | chr8:10097288-10097527 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 74, 18 |
| Conread position: | 501-924 |
| Cow position: | chr8:40113580-40113988 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 117 |
| Conread position: | 504-745 |
| Cow position: | chr8:26828750-26828986 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 95, 49 |
| Conread position: | 504-750 |
| Cow position: | chr8:36295018-36295274 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 95, 41 |
| Conread position: | 505-722 |
| Cow position: | chr8:24566108-24566339 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 505-722 |
| Cow position: | chr8:52145588-52145816 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 514-737 |
| Cow position: | chr8:45344129-45343893 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 85, 39 |
| Conread position: | 514-745 |
| Cow position: | chr8:26079550-26079787 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 85, 156 |
| Conread position: | 514-759 |
| Cow position: | chr8:9076740-9076988 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 120 |
| Conread position: | 514-759 |
| Cow position: | chr8:12525001-12524749 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 30, 113 |
| Conread position: | 514-768 |
| Cow position: | chr8:7418953-7419215 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 39, 25 |
| Conread position: | 514-768 |
| Cow position: | chr8:45966357-45966089 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 169 |
| Conread position: | 515-737 |
| Cow position: | chr8:21986252-21986470 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 100, 41 |
| Conread position: | 515-748 |
| Cow position: | chr8:8784471-8784240 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 99, 74 |
| Conread position: | 515-748 |
| Cow position: | chr8:21896900-21896674 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 100, 35 |
| Conread position: | 515-755 |
| Cow position: | chr8:21977890-21978129 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 100, 75 |
| Conread position: | 515-759 |
| Cow position: | chr8:18950929-18951170 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 99, 74 |
| Conread position: | 515-759 |
| Cow position: | chr8:19396213-19396449 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 100, 75 |
| Conread position: | 515-759 |
| Cow position: | chr8:48707753-48707510 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 100, 76 |
| Conread position: | 515-760 |
| Cow position: | chr8:5650318-5650081 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 99, 84 |
| Conread position: | 515-760 |
| Cow position: | chr8:5959433-5959191 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 100, 91 |
| Conread position: | 515-760 |
| Cow position: | chr8:30549642-30549400 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 159, 91 |
| Conread position: | 515-760 |
| Cow position: | chr8:39880584-39880819 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 515-760 |
| Cow position: | chr8:58150615-58150363 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 51, 97 |
| Conread position: | 515-768 |
| Cow position: | chr8:61168654-61168918 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 515-771 |
| Cow position: | chr8:53044292-53044042 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 99, 62 |
| Conread position: | 515-846 |
| Cow position: | chr8:1365491-1365828 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 84, 75 |
| Conread position: | 515-859 |
| Cow position: | chr8:39940456-39940131 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 99, 84 |
| Conread position: | 515-924 |
| Cow position: | chr8:3552364-3551952 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 149 |
| Conread position: | 516-760 |
| Cow position: | chr8:9701333-9701566 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 99, 28 |
| Conread position: | 520-759 |
| Cow position: | chr8:8573895-8573659 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 95, 46 |
| Conread position: | 520-775 |
| Cow position: | chr8:33777535-33777273 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 24, 122 |
| Conread position: | 520-872 |
| Cow position: | chr8:47802239-47801880 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 63 |
| Conread position: | 520-924 |
| Cow position: | chr8:23704716-23704303 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 254 |
| Conread position: | 521-768 |
| Cow position: | chr8:1102853-1103103 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 523-768 |
| Cow position: | chr8:29240787-29240535 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 524-768 |
| Cow position: | chr8:25584905-25585145 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 75, 59 |
| Conread position: | 530-923 |
| Cow position: | chr8:46751389-46750997 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 543-760 |
| Cow position: | chr8:12576883-12576660 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 5, 22 |
| Conread position: | 550-759 |
| Cow position: | chr8:36296422-36296211 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 607-760 |
| Cow position: | chr8:59234660-59234504 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 742-924 |
| Cow position: | chr8:58166872-58166693 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 22 |
Show alignments to all cow chromosomes.