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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8021F15.5
        

               
Conread position:
               
416-635
               

               
Cow position:
               
chr13:18975426-18975218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
417-646
               

               
Cow position:
               
chr13:3314930-3315155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
417-648
               

               
Cow position:
               
chr13:60489602-60489830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
424-648
               

               
Cow position:
               
chr13:14034264-14034040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
445-627
               

               
Cow position:
               
chr13:2804877-2804702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
445-645
               

               
Cow position:
               
chr13:32166659-32166850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
446-648
               

               
Cow position:
               
chr13:22774648-22774847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
447-648
               

               
Cow position:
               
chr13:16270627-16270425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
447-676
               

               
Cow position:
               
chr13:22189207-22189437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
448-569
               

               
Cow position:
               
chr13:13177083-13176961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
448-613
               

               
Cow position:
               
chr13:10933464-10933293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
12, 153
               

               
Conread position:
               
448-626
               

               
Cow position:
               
chr13:42276932-42277111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
448-639
               

               
Cow position:
               
chr13:33907408-33907212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
448-644
               

               
Cow position:
               
chr13:45002380-45002178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
448-646
               

               
Cow position:
               
chr13:6664792-6664593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
448-646
               

               
Cow position:
               
chr13:14302651-14302452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
448-646
               

               
Cow position:
               
chr13:18329789-18329590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
448-646
               

               
Cow position:
               
chr13:20778131-20777933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 96
               

               
Conread position:
               
448-646
               

               
Cow position:
               
chr13:30505109-30504912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
448-646
               

               
Cow position:
               
chr13:32794006-32793807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
448-647
               

               
Cow position:
               
chr13:21855660-21855867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 96
               

               
Conread position:
               
448-648
               

               
Cow position:
               
chr13:12978212-12978008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
448-648
               

               
Cow position:
               
chr13:15446701-15446500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
448-648
               

               
Cow position:
               
chr13:17820611-17820809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 119
               

               
Conread position:
               
448-648
               

               
Cow position:
               
chr13:21135068-21135269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
448-648
               

               
Cow position:
               
chr13:21905576-21905375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
448-648
               

               
Cow position:
               
chr13:32905553-32905355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
12, 109
               

               
Conread position:
               
448-648
               

               
Cow position:
               
chr13:34871296-34871493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
448-648
               

               
Cow position:
               
chr13:41361451-41361250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
448-648
               

               
Cow position:
               
chr13:49805621-49805421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
448-648
               

               
Cow position:
               
chr13:53574652-53574453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
448-648
               

               
Cow position:
               
chr13:60508476-60508669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 109
               

               
Conread position:
               
448-649
               

               
Cow position:
               
chr13:40832114-40831915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
114, 7
               

               
Conread position:
               
448-652
               

               
Cow position:
               
chr13:8321469-8321267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
448-668
               

               
Cow position:
               
chr13:42896250-42896470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 103
               

               
Conread position:
               
449-648
               

               
Cow position:
               
chr13:41565661-41565458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
450-647
               

               
Cow position:
               
chr13:41826591-41826791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
451-623
               

               
Cow position:
               
chr13:25320444-25320274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
9, 112
               

               
Conread position:
               
451-648
               

               
Cow position:
               
chr13:21126432-21126630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
451-679
               

               
Cow position:
               
chr13:46496325-46496096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 22
               

               
Conread position:
               
454-648
               

               
Cow position:
               
chr13:60219433-60219625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
8, 123
               

               
Conread position:
               
455-646
               

               
Cow position:
               
chr13:34345647-34345837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
455-648
               

               
Cow position:
               
chr13:54237968-54237779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
456-645
               

               
Cow position:
               
chr13:22780631-22780446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
461-647
               

               
Cow position:
               
chr13:49397539-49397359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
184, 60
               

               
Conread position:
               
461-648
               

               
Cow position:
               
chr13:971251-971442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
461-648
               

               
Cow position:
               
chr13:9734590-9734403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
461-648
               

               
Cow position:
               
chr13:15622494-15622307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
461-648
               

               
Cow position:
               
chr13:25848740-25848927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
461-671
               

               
Cow position:
               
chr13:2465792-2466002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
463-646
               

               
Cow position:
               
chr13:30306766-30306949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
463-648
               

               
Cow position:
               
chr13:1155069-1155255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
463-648
               

               
Cow position:
               
chr13:3163140-3162955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
463-648
               

               
Cow position:
               
chr13:30034994-30034811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
463-649
               

               
Cow position:
               
chr13:47007100-47007292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
92, 154
               

               
Conread position:
               
464-626
               

               
Cow position:
               
chr13:30651810-30651649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
464-640
               

               
Cow position:
               
chr13:28683990-28683814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
464-644
               

               
Cow position:
               
chr13:4487206-4487386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
464-644
               

               
Cow position:
               
chr13:21402157-21402332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 104
               

               
Conread position:
               
464-645
               

               
Cow position:
               
chr13:34298943-34299122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
464-645
               

               
Cow position:
               
chr13:46660875-46661052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
464-646
               

               
Cow position:
               
chr13:34508475-34508298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
464-647
               

               
Cow position:
               
chr13:3480390-3480206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:1636765-1636949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:1840053-1839865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:1882161-1881978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:4420948-4420764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
44, 71
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:6716681-6716498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:11129898-11129716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:11136422-11136240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
139, 80
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:13577309-13577127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:19229835-19229655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:19262415-19262231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:25891899-25892079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:32817333-32817147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:33522603-33522419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:34262744-34262929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:34375897-34375709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 78
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:39943942-39944125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
95, 79
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:41807388-41807207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:42114650-42114470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:47590508-47590687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:49514099-49514281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:52077182-52077366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
464-648
               

               
Cow position:
               
chr13:61976332-61976513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
464-673
               

               
Cow position:
               
chr13:49977023-49977232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
464-676
               

               
Cow position:
               
chr13:9357725-9357516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
206, 96
               

               
Conread position:
               
464-676
               

               
Cow position:
               
chr13:34905240-34905029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
464-678
               

               
Cow position:
               
chr13:9666128-9665922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
464-679
               

               
Cow position:
               
chr13:16015461-16015238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
464-687
               

               
Cow position:
               
chr13:46529965-46530182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 93
               

               
Conread position:
               
465-621
               

               
Cow position:
               
chr13:32009195-32009351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
465-648
               

               
Cow position:
               
chr13:19451090-19451272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
467-634
               

               
Cow position:
               
chr13:20538215-20538044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
467-647
               

               
Cow position:
               
chr13:14409470-14409644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
467-647
               

               
Cow position:
               
chr13:42047336-42047152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
467-648
               

               
Cow position:
               
chr13:1011962-1011786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
467-648
               

               
Cow position:
               
chr13:11075440-11075618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
467-648
               

               
Cow position:
               
chr13:32659273-32659099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
467-648
               

               
Cow position:
               
chr13:36673023-36673205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
467-649
               

               
Cow position:
               
chr13:3143860-3143678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
467-649
               

               
Cow position:
               
chr13:19016238-19016056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
467-652
               

               
Cow position:
               
chr13:30280339-30280523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
467-676
               

               
Cow position:
               
chr13:55406055-55406253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
468-645
               

               
Cow position:
               
chr13:27326034-27326210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
468-648
               

               
Cow position:
               
chr13:5717338-5717157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
468-648
               

               
Cow position:
               
chr13:19264432-19264252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
468-648
               

               
Cow position:
               
chr13:20464948-20465128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
468-648
               

               
Cow position:
               
chr13:22906916-22906744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
468-648
               

               
Cow position:
               
chr13:54864301-54864473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
468-671
               

               
Cow position:
               
chr13:12616381-12616185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
468-671
               

               
Cow position:
               
chr13:32921956-32921753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
469-648
               

               
Cow position:
               
chr13:54095484-54095309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
469-671
               

               
Cow position:
               
chr13:186135-185942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
470-562
               

               
Cow position:
               
chr13:38897660-38897752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-588
               

               
Cow position:
               
chr13:3419557-3419439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-595
               

               
Cow position:
               
chr13:33162307-33162432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-611
               

               
Cow position:
               
chr13:41337324-41337184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
470-628
               

               
Cow position:
               
chr13:11933931-11934088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
470-629
               

               
Cow position:
               
chr13:7700665-7700815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
470-631
               

               
Cow position:
               
chr13:40300388-40300227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-634
               

               
Cow position:
               
chr13:4944749-4944910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
470-639
               

               
Cow position:
               
chr13:20561728-20561560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
470-639
               

               
Cow position:
               
chr13:24690924-24690757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
132, 105
               

               
Conread position:
               
470-643
               

               
Cow position:
               
chr13:24754649-24754466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
37, 123
               

               
Conread position:
               
470-645
               

               
Cow position:
               
chr13:11390617-11390792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-645
               

               
Cow position:
               
chr13:11486395-11486570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-645
               

               
Cow position:
               
chr13:29091822-29091997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-645
               

               
Cow position:
               
chr13:58211287-58211112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:1005520-1005344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:1590794-1590619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:2800243-2800419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:3015540-3015711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:3650946-3650771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:7465738-7465562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:9048958-9049134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
107, 130
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:9537596-9537770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:14399716-14399540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:15921101-15920926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:19638797-19638973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:23266473-23266299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:30468759-30468583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:31608079-31607904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:32550103-32550276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:34038200-34038022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:38612573-38612745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:43383791-43383967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:46297834-46297999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:46524834-46525008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
470-646
               

               
Cow position:
               
chr13:48627895-48628070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:645283-645461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:670600-670779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:681410-681588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:706292-706469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:1346807-1346629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:1368648-1368471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:2137864-2137687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:2414655-2414478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:2725448-2725270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:3430098-3430276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:3556770-3556948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:4615365-4615543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:4963585-4963763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:6055005-6054832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:6343241-6343419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:6361007-6361185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:6417899-6418072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:6442810-6442980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:6602018-6602192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:7402764-7402942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:8009947-8010125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:8173040-8172862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:8300914-8301092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:11795345-11795165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:12390019-12389841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:12991249-12991068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
58, 41
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:13776320-13776498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:14551772-14551594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:14590154-14589976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:14716714-14716880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
91, 108
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:15538627-15538449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:16807945-16808119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:17270887-17270712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:18054615-18054793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:18121512-18121337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:18852959-18852780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:19102318-19102140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:19565349-19565171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:20472900-20472722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:20520612-20520790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:20563620-20563445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:20605490-20605668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:20931066-20930888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:21107768-21107591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
129, 95
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:21678622-21678448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:22085128-22085305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:24931461-24931284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:25882587-25882766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:26073559-26073386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:26204100-26203922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:27407721-27407547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:27417267-27417089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:28130667-28130489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:28131862-28132040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:29055069-29054891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:31312519-31312691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:31580183-31580361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:31836251-31836072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:32081235-32081413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:32773997-32773818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:32980876-32980704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:33631790-33631613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:34762666-34762498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:34994311-34994477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:35540760-35540938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:36346632-36346457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:36937079-36937256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:37122142-37122320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:37520718-37520896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:38574781-38574606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:39911757-39911933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:42086774-42086596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:42215760-42215582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:43119915-43119737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:43594189-43594367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:43802608-43802776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:43892180-43892358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:46182403-46182226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:47023340-47023162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:50063474-50063652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:50112826-50113003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:50189715-50189537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:50440469-50440291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:50618904-50618728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:51298129-51297951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:51902247-51902070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:52019760-52019938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:52700339-52700166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 6
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:52859638-52859469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:53052195-53052373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:53157030-53156852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:55338096-55338272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:56526703-56526880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:56692629-56692808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:57493553-57493730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:58313691-58313869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:60429459-60429636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:60616582-60616404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-648
               

               
Cow position:
               
chr13:60646226-60646048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-650
               

               
Cow position:
               
chr13:34941027-34941204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
470-653
               

               
Cow position:
               
chr13:17547458-17547275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
470-671
               

               
Cow position:
               
chr13:561030-560828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
470-671
               

               
Cow position:
               
chr13:3021126-3020925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-671
               

               
Cow position:
               
chr13:7870205-7870005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
470-671
               

               
Cow position:
               
chr13:9803696-9803495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 189
               

               
Conread position:
               
470-671
               

               
Cow position:
               
chr13:13903214-13903415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-671
               

               
Cow position:
               
chr13:15280647-15280848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-671
               

               
Cow position:
               
chr13:32733832-32733631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
470-671
               

               
Cow position:
               
chr13:47318199-47317994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
470-676
               

               
Cow position:
               
chr13:11687637-11687852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
470-676
               

               
Cow position:
               
chr13:18167642-18167440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
42, 71
               

               
Conread position:
               
470-676
               

               
Cow position:
               
chr13:34332882-34333088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
10, 101
               

               
Conread position:
               
470-676
               

               
Cow position:
               
chr13:46465858-46465653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
470-676
               

               
Cow position:
               
chr13:55604167-55603964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
25, 97
               

               
Conread position:
               
470-678
               

               
Cow position:
               
chr13:42214775-42214569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
470-678
               

               
Cow position:
               
chr13:47537113-47537313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
470-679
               

               
Cow position:
               
chr13:45353649-45353453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
470-680
               

               
Cow position:
               
chr13:1959790-1959585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
93, 85
               

               
Conread position:
               
470-689
               

               
Cow position:
               
chr13:51941365-51941148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
470-759
               

               
Cow position:
               
chr13:23196235-23196524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
471-619
               

               
Cow position:
               
chr13:1847697-1847844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
471-645
               

               
Cow position:
               
chr13:37947290-37947462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
471-647
               

               
Cow position:
               
chr13:12611458-12611634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
91, 75
               

               
Conread position:
               
471-648
               

               
Cow position:
               
chr13:105293-105122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
471-648
               

               
Cow position:
               
chr13:2557881-2558057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
471-648
               

               
Cow position:
               
chr13:11254299-11254119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
471-648
               

               
Cow position:
               
chr13:11822589-11822413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
471-648
               

               
Cow position:
               
chr13:17252610-17252436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
471-648
               

               
Cow position:
               
chr13:37978559-37978733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
471-648
               

               
Cow position:
               
chr13:37982086-37982261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 23
               

               
Conread position:
               
471-671
               

               
Cow position:
               
chr13:31990228-31990428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
471-672
               

               
Cow position:
               
chr13:11821950-11821750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
471-676
               

               
Cow position:
               
chr13:11315910-11316115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
472-613
               

               
Cow position:
               
chr13:21836936-21836795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
472-629
               

               
Cow position:
               
chr13:35629646-35629492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
472-645
               

               
Cow position:
               
chr13:33466781-33466954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
472-648
               

               
Cow position:
               
chr13:21235060-21235236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
472-648
               

               
Cow position:
               
chr13:24059701-24059877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
472-648
               

               
Cow position:
               
chr13:24102140-24101965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
472-648
               

               
Cow position:
               
chr13:24371026-24370858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
472-648
               

               
Cow position:
               
chr13:26098772-26098596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
472-648
               

               
Cow position:
               
chr13:36716698-36716874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
472-648
               

               
Cow position:
               
chr13:38013304-38013132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
472-648
               

               
Cow position:
               
chr13:41607742-41607914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
472-648
               

               
Cow position:
               
chr13:46459278-46459109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
472-648
               

               
Cow position:
               
chr13:60967420-60967249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
472-648
               

               
Cow position:
               
chr13:60974936-60974760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
472-649
               

               
Cow position:
               
chr13:8782247-8782425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
472-676
               

               
Cow position:
               
chr13:17317960-17317758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
473-646
               

               
Cow position:
               
chr13:9301746-9301919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
474-635
               

               
Cow position:
               
chr13:10755515-10755354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
474-647
               

               
Cow position:
               
chr13:48334205-48334377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
113, 35
               

               
Conread position:
               
474-648
               

               
Cow position:
               
chr13:6078817-6078991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
474-676
               

               
Cow position:
               
chr13:42245816-42246013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
189, 16
               

               
Conread position:
               
475-648
               

               
Cow position:
               
chr13:13126364-13126193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
475-648
               

               
Cow position:
               
chr13:20683500-20683672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
475-648
               

               
Cow position:
               
chr13:34190600-34190764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
475-648
               

               
Cow position:
               
chr13:34929145-34929318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
61, 128
               

               
Conread position:
               
475-648
               

               
Cow position:
               
chr13:51854504-51854682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
476-627
               

               
Cow position:
               
chr13:51332441-51332592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
476-648
               

               
Cow position:
               
chr13:11767338-11767516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
476-648
               

               
Cow position:
               
chr13:22790541-22790369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
477-566
               

               
Cow position:
               
chr13:24374563-24374652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
477-621
               

               
Cow position:
               
chr13:10733334-10733477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
477-637
               

               
Cow position:
               
chr13:17328555-17328398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
477-644
               

               
Cow position:
               
chr13:26172981-26172815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
477-645
               

               
Cow position:
               
chr13:48251347-48251515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
477-646
               

               
Cow position:
               
chr13:3799767-3799932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
477-646
               

               
Cow position:
               
chr13:43974592-43974423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
477-647
               

               
Cow position:
               
chr13:21764711-21764874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
477-647
               

               
Cow position:
               
chr13:48627428-48627260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
477-647
               

               
Cow position:
               
chr13:62479901-62480078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
477-648
               

               
Cow position:
               
chr13:5317408-5317237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
477-648
               

               
Cow position:
               
chr13:6177429-6177604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 163
               

               
Conread position:
               
477-648
               

               
Cow position:
               
chr13:6869669-6869840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
477-648
               

               
Cow position:
               
chr13:10859314-10859484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
477-648
               

               
Cow position:
               
chr13:11290190-11290357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
477-648
               

               
Cow position:
               
chr13:22080171-22080001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
477-648
               

               
Cow position:
               
chr13:36106878-36107049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
90, 22
               

               
Conread position:
               
477-648
               

               
Cow position:
               
chr13:44205680-44205511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
477-648
               

               
Cow position:
               
chr13:44323603-44323432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
477-648
               

               
Cow position:
               
chr13:47369842-47370009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
156, 34
               

               
Conread position:
               
477-648
               

               
Cow position:
               
chr13:57769399-57769571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
477-649
               

               
Cow position:
               
chr13:16344318-16344146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
477-675
               

               
Cow position:
               
chr13:29658460-29658261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
173, 183
               

               
Conread position:
               
477-676
               

               
Cow position:
               
chr13:19289602-19289407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
477-676
               

               
Cow position:
               
chr13:60690094-60690291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
170, 19
               

               
Conread position:
               
478-609
               

               
Cow position:
               
chr13:37832099-37832227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
478-644
               

               
Cow position:
               
chr13:46736820-46736655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
478-648
               

               
Cow position:
               
chr13:5622375-5622213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
478-652
               

               
Cow position:
               
chr13:9693175-9693002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
478-657
               

               
Cow position:
               
chr13:11809144-11808966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
478-676
               

               
Cow position:
               
chr13:61072027-61071834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
479-648
               

               
Cow position:
               
chr13:4442152-4441987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
152, 71
               

               
Conread position:
               
479-648
               

               
Cow position:
               
chr13:26160858-26161026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
479-671
               

               
Cow position:
               
chr13:11571312-11571119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
131, 137
               

               
Conread position:
               
479-676
               

               
Cow position:
               
chr13:27737526-27737719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
480-638
               

               
Cow position:
               
chr13:11833992-11833834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
480-647
               

               
Cow position:
               
chr13:7365823-7365990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr13:5498435-5498268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr13:19218764-19218601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr13:19274071-19273903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr13:20181310-20181143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr13:41701990-41701814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
480-648
               

               
Cow position:
               
chr13:53328798-53328968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
481-648
               

               
Cow position:
               
chr13:57027598-57027763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
481-648
               

               
Cow position:
               
chr13:57423980-57423813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
481-675
               

               
Cow position:
               
chr13:11173725-11173531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 57
               

               
Conread position:
               
482-668
               

               
Cow position:
               
chr13:43034260-43034442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
483-634
               

               
Cow position:
               
chr13:32152422-32152270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
483-647
               

               
Cow position:
               
chr13:21009025-21009190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
483-648
               

               
Cow position:
               
chr13:4604884-4604720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
483-648
               

               
Cow position:
               
chr13:17496432-17496597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
483-648
               

               
Cow position:
               
chr13:34728228-34728392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
483-648
               

               
Cow position:
               
chr13:47357235-47357068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
483-648
               

               
Cow position:
               
chr13:52251269-52251431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
483-651
               

               
Cow position:
               
chr13:46597774-46597619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
483-652
               

               
Cow position:
               
chr13:12877726-12877556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
483-676
               

               
Cow position:
               
chr13:32319759-32319568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
484-648
               

               
Cow position:
               
chr13:32825795-32825953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
76, 71
               

               
Conread position:
               
484-648
               

               
Cow position:
               
chr13:45933997-45934161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
484-648
               

               
Cow position:
               
chr13:54975187-54975351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
484-678
               

               
Cow position:
               
chr13:20243132-20243314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
485-648
               

               
Cow position:
               
chr13:1638044-1638208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
485-648
               

               
Cow position:
               
chr13:27835721-27835883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
486-645
               

               
Cow position:
               
chr13:11148366-11148207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
486-647
               

               
Cow position:
               
chr13:24237582-24237742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
129, 21
               

               
Conread position:
               
486-648
               

               
Cow position:
               
chr13:11669579-11669419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
486-648
               

               
Cow position:
               
chr13:36352373-36352535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
73, 104
               

               
Conread position:
               
486-648
               

               
Cow position:
               
chr13:52009979-52010136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
489-644
               

               
Cow position:
               
chr13:25695157-25695313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
489-648
               

               
Cow position:
               
chr13:16972827-16972981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 117
               

               
Conread position:
               
489-648
               

               
Cow position:
               
chr13:40492043-40491885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
489-648
               

               
Cow position:
               
chr13:41113601-41113759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
489-648
               

               
Cow position:
               
chr13:54286163-54286322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
490-646
               

               
Cow position:
               
chr13:20880044-20880198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
490-671
               

               
Cow position:
               
chr13:32754628-32754809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
491-648
               

               
Cow position:
               
chr13:17800684-17800527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
492-645
               

               
Cow position:
               
chr13:15167427-15167274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
492-645
               

               
Cow position:
               
chr13:22022428-22022276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
492-648
               

               
Cow position:
               
chr13:34112917-34112772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
493-647
               

               
Cow position:
               
chr13:45072816-45072967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
132, 84
               

               
Conread position:
               
495-648
               

               
Cow position:
               
chr13:19393862-19393707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
495-676
               

               
Cow position:
               
chr13:14315286-14315104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
496-630
               

               
Cow position:
               
chr13:56149072-56148938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
496-646
               

               
Cow position:
               
chr13:56159895-56160043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
496-648
               

               
Cow position:
               
chr13:6553087-6552932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
496-648
               

               
Cow position:
               
chr13:31809116-31808966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
496-648
               

               
Cow position:
               
chr13:32961043-32961191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
496-671
               

               
Cow position:
               
chr13:37980081-37980253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
496-676
               

               
Cow position:
               
chr13:1442648-1442824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
497-646
               

               
Cow position:
               
chr13:47501983-47502131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
93, 76
               

               
Conread position:
               
497-647
               

               
Cow position:
               
chr13:29670490-29670638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
124, 15
               

               
Conread position:
               
497-676
               

               
Cow position:
               
chr13:24405311-24405132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
499-646
               

               
Cow position:
               
chr13:18815345-18815200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
500-647
               

               
Cow position:
               
chr13:1636607-1636462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
500-676
               

               
Cow position:
               
chr13:62018463-62018638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
501-626
               

               
Cow position:
               
chr13:34658612-34658739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 101
               

               
Conread position:
               
501-648
               

               
Cow position:
               
chr13:34282281-34282137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 27
               

               
Conread position:
               
506-648
               

               
Cow position:
               
chr13:15282652-15282794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
507-648
               

               
Cow position:
               
chr13:53535702-53535843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
509-648
               

               
Cow position:
               
chr13:46985604-46985466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
511-648
               

               
Cow position:
               
chr13:52275823-52275960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
512-648
               

               
Cow position:
               
chr13:21986702-21986838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
516-648
               

               
Cow position:
               
chr13:35525463-35525593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
519-646
               

               
Cow position:
               
chr13:23444222-23444350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
519-648
               

               
Cow position:
               
chr13:60393214-60393343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
519-679
               

               
Cow position:
               
chr13:46324208-46324368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
133, 123
               

               
Conread position:
               
522-648
               

               
Cow position:
               
chr13:19108497-19108372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
523-648
               

               
Cow position:
               
chr13:26382641-26382767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
540-642
               

               
Cow position:
               
chr13:49848439-49848337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-648
               

               
Cow position:
               
chr13:33976213-33976122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.