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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8021F20.5
        

               
Conread position:
               
1-117
               

               
Cow position:
               
chr23:26093516-26093632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-117
               

               
Cow position:
               
chr23:39741458-39741574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-125
               

               
Cow position:
               
chr23:30633879-30634003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-130
               

               
Cow position:
               
chr23:9712613-9712483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr23:20541995-20541865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr23:2721429-2721295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr23:18624267-18624132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr23:14385996-14386133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr23:3710412-3710274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr23:4608894-4609032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr23:40734828-40734966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-142
               

               
Cow position:
               
chr23:15703005-15703152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr23:13519958-13519821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 88
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr23:20734007-20733865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr23:1398530-1398673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
115, 65
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr23:3786144-3786001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr23:7392770-7392913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr23:3904477-3904334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr23:6593216-6593360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr23:6720771-6720915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr23:7844789-7844648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr23:36485320-36485464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr23:40553429-40553573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr23:4517238-4517096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr23:15180668-15180523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr23:25358045-25357910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr23:32877255-32877401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:573555-573701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:610413-610267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:954088-954234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:977338-977483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:1113664-1113518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:1310861-1311006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 107
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:1321687-1321830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:1428306-1428160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:1535829-1535682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:1545452-1545307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
128, 103
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:1604734-1604588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:1941649-1941503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:1959839-1959693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:2023377-2023522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:2033108-2032958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:2320238-2320384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:2408501-2408648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:2472589-2472735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:2528685-2528830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:2723458-2723312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:3302567-3302421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:3549483-3549629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:3827378-3827524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:4100590-4100444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:4267148-4267002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:4273682-4273539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:4487254-4487402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:4531990-4532136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:4544605-4544751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:4581738-4581592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:4636639-4636785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:4892409-4892262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:5441629-5441483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:5623868-5624015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:6223526-6223382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:7174233-7174090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:8277129-8277279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:8708103-8707957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:9222859-9222716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 67
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:9517962-9518108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:10014047-10013901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:10852555-10852409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:10873950-10874096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:10936585-10936731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:11080097-11079951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:11128723-11128577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:11209496-11209351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
50, 54
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:11344204-11344059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:11459530-11459676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:11711983-11712129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:11782498-11782352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:12864400-12864254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:14215522-14215668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:14266052-14265906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:14970244-14970388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:15020625-15020482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:15058124-15058269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:15215138-15215284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:15529297-15529151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:15569274-15569128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:16246244-16246098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:16687337-16687483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:17846701-17846555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:19056649-19056795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:19316499-19316645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:19948311-19948456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 73
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:20152508-20152654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:21009398-21009252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:21343807-21343950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:21351243-21351389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:22143598-22143744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:22170618-22170473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:22804229-22804083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:23949493-23949349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:24098838-24098692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:24120267-24120121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:25192702-25192848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:25352072-25351926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:25676161-25676307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:26305877-26305735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:26840883-26840737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:26932590-26932738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:26941481-26941335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:27314455-27314309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:27402846-27402701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:28084867-28084721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:28222413-28222267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:28306557-28306411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:28916040-28915894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:28979587-28979441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:29043496-29043350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:29346763-29346909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:29446243-29446384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:29447548-29447692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:29471600-29471745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:29625930-29625784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:30622788-30622934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:31585014-31584868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:31606140-31605994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:35284808-35284954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:35683221-35683367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:35937518-35937380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:36308917-36308771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:39389758-39389612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:39745572-39745426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:39784469-39784323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:39812732-39812588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:40710633-40710487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:40774040-40773894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:41015641-41015495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr23:41285439-41285295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr23:14575924-14575774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr23:671882-671728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr23:5458451-5458297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr23:31423131-31423285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr23:14958180-14958342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr23:19493565-19493391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr23:11844803-11844631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr23:16072728-16072549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
64, 52
               

               
Conread position:
               
2-137
               

               
Cow position:
               
chr23:26824492-26824358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
2-138
               

               
Cow position:
               
chr23:30244190-30244054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-147
               

               
Cow position:
               
chr23:2369495-2369356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
2-147
               

               
Cow position:
               
chr23:10554512-10554658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
2-147
               

               
Cow position:
               
chr23:26828954-26828813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
2-147
               

               
Cow position:
               
chr23:34347606-34347461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-147
               

               
Cow position:
               
chr23:40890484-40890340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-116
               

               
Cow position:
               
chr23:2262751-2262864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-133
               

               
Cow position:
               
chr23:26318920-26318792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
3-137
               

               
Cow position:
               
chr23:32937504-32937638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-137
               

               
Cow position:
               
chr23:32940168-32940302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-138
               

               
Cow position:
               
chr23:6698550-6698414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
3-140
               

               
Cow position:
               
chr23:31602251-31602386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
3-146
               

               
Cow position:
               
chr23:8291159-8291018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr23:2791065-2791208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr23:4437330-4437184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr23:5870698-5870842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr23:7311371-7311228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr23:7468655-7468511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr23:9267153-9267296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr23:9733894-9733750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr23:11068128-11067990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr23:11250025-11250169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr23:11376608-11376752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr23:12978448-12978311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr23:13511235-13511091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr23:19002576-19002720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr23:25665113-25665254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
60, 110
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr23:33233621-33233759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr23:36027542-36027686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr23:38934523-38934668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
3-176
               

               
Cow position:
               
chr23:26230824-26230667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr23:25377661-25377466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 147
               

               
Conread position:
               
4-146
               

               
Cow position:
               
chr23:11078987-11078846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
4-147
               

               
Cow position:
               
chr23:28118576-28118718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
4-147
               

               
Cow position:
               
chr23:41116405-41116548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-142
               

               
Cow position:
               
chr23:35653368-35653230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
5-145
               

               
Cow position:
               
chr23:5721491-5721630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
5-147
               

               
Cow position:
               
chr23:6173312-6173460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
5-147
               

               
Cow position:
               
chr23:7293888-7293746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-146
               

               
Cow position:
               
chr23:14910724-14910863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
6-147
               

               
Cow position:
               
chr23:1924627-1924768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-147
               

               
Cow position:
               
chr23:20025643-20025499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
15-133
               

               
Cow position:
               
chr23:27899840-27899722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-136
               

               
Cow position:
               
chr23:32007715-32007834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
15-146
               

               
Cow position:
               
chr23:6070728-6070859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-147
               

               
Cow position:
               
chr23:16495580-16495710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
18-120
               

               
Cow position:
               
chr23:5539323-5539425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-147
               

               
Cow position:
               
chr23:3167735-3167606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
19-147
               

               
Cow position:
               
chr23:3286451-3286323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
20-156
               

               
Cow position:
               
chr23:1696304-1696169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
37-141
               

               
Cow position:
               
chr23:32230583-32230479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
38-147
               

               
Cow position:
               
chr23:1337815-1337924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
47-147
               

               
Cow position:
               
chr23:361976-362076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
53-169
               

               
Cow position:
               
chr23:344809-344924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               
Show alignments to all cow chromosomes.