Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8021L09.3
        

               Conread position:
               487-766
               

               Cow position:
               chr6:12928456-12928186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               239, 27
               

               Conread position:
               496-727
               

               Cow position:
               chr6:38610289-38610050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 158
               

               Conread position:
               501-709
               

               Cow position:
               chr6:63233823-63233613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               503-747
               

               Cow position:
               chr6:10175997-10176240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               158, 18
               

               Conread position:
               510-699
               

               Cow position:
               chr6:66590366-66590182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               515-718
               

               Cow position:
               chr6:44566724-44566513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 161
               

               Conread position:
               515-726
               

               Cow position:
               chr6:632949-633170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               49, 210
               

               Conread position:
               524-713
               

               Cow position:
               chr6:59104884-59104696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 7
               

               Conread position:
               524-714
               

               Cow position:
               chr6:26764540-26764735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               525-747
               

               Cow position:
               chr6:13687532-13687750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 60
               

               Conread position:
               528-732
               

               Cow position:
               chr6:14913960-14914159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               124, 19
               

               Conread position:
               529-747
               

               Cow position:
               chr6:55548258-55548472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               134, 17
               

               Conread position:
               533-726
               

               Cow position:
               chr6:26638664-26638470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               125, 43
               

               Conread position:
               534-752
               

               Cow position:
               chr6:38640502-38640290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               112, 35
               

               Conread position:
               535-743
               

               Cow position:
               chr6:56061935-56061726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               124, 183
               

               Conread position:
               536-727
               

               Cow position:
               chr6:24110555-24110363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               125, 184
               

               Conread position:
               536-752
               

               Cow position:
               chr6:62670141-62669922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               98, 14
               

               Conread position:
               539-747
               

               Cow position:
               chr6:23058481-23058273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               118, 30
               

               Conread position:
               540-714
               

               Cow position:
               chr6:3952787-3952611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               118, 10
               

               Conread position:
               540-718
               

               Cow position:
               chr6:42035034-42034861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               540-732
               

               Cow position:
               chr6:35984867-35985060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               121, 178
               

               Conread position:
               540-747
               

               Cow position:
               chr6:7539840-7539635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               126, 165
               

               Conread position:
               540-749
               

               Cow position:
               chr6:21467002-21467208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 48
               

               Conread position:
               541-705
               

               Cow position:
               chr6:62539343-62539501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               541-734
               

               Cow position:
               chr6:54828051-54828248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               27, 185
               

               Conread position:
               542-717
               

               Cow position:
               chr6:63251657-63251833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               118, 27
               

               Conread position:
               542-718
               

               Cow position:
               chr6:50444848-50445029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               542-742
               

               Cow position:
               chr6:54365067-54365261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               119, 33
               

               Conread position:
               542-747
               

               Cow position:
               chr6:1941565-1941770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               10, 107
               

               Conread position:
               542-747
               

               Cow position:
               chr6:5330675-5330474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               119, 17
               

               Conread position:
               542-747
               

               Cow position:
               chr6:50504724-50504518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               15, 116
               

               Conread position:
               543-706
               

               Cow position:
               chr6:60088213-60088376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               75, 7
               

               Conread position:
               543-722
               

               Cow position:
               chr6:13653611-13653430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 175
               

               Conread position:
               543-750
               

               Cow position:
               chr6:22849984-22850196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               25, 179
               

               Conread position:
               544-713
               

               Cow position:
               chr6:55405174-55405005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               544-714
               

               Cow position:
               chr6:33302659-33302487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               544-726
               

               Cow position:
               chr6:30122902-30123087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               18, 176
               

               Conread position:
               544-747
               

               Cow position:
               chr6:55518139-55517937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               115, 34
               

               Conread position:
               545-650
               

               Cow position:
               chr6:59092726-59092622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               545-727
               

               Cow position:
               chr6:8688588-8688765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               545-727
               

               Cow position:
               chr6:19936306-19936488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               110, 134
               

               Conread position:
               545-730
               

               Cow position:
               chr6:50771099-50771283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               116, 47
               

               Conread position:
               545-732
               

               Cow position:
               chr6:18954828-18955002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               12, 57
               

               Conread position:
               546-709
               

               Cow position:
               chr6:55196481-55196310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               546-768
               

               Cow position:
               chr6:12965114-12964894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               109, 23
               

               Conread position:
               547-654
               

               Cow position:
               chr6:31231032-31231137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               547-705
               

               Cow position:
               chr6:6264909-6264755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               547-705
               

               Cow position:
               chr6:63010926-63011088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               16, 160
               

               Conread position:
               547-725
               

               Cow position:
               chr6:61110041-61109871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               547-727
               

               Cow position:
               chr6:19402104-19401932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               547-727
               

               Cow position:
               chr6:54840241-54840426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               82, 22
               

               Conread position:
               547-732
               

               Cow position:
               chr6:21004937-21004753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               108, 20
               

               Conread position:
               547-739
               

               Cow position:
               chr6:33450719-33450904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               547-744
               

               Cow position:
               chr6:50577774-50577585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               547-747
               

               Cow position:
               chr6:2078559-2078753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               547-747
               

               Cow position:
               chr6:51529929-51530126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               25, 56
               

               Conread position:
               547-747
               

               Cow position:
               chr6:55044381-55044580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               114, 52
               

               Conread position:
               547-750
               

               Cow position:
               chr6:32866965-32867160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               186, 13
               

               Conread position:
               547-750
               

               Cow position:
               chr6:64428934-64429137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               112, 171
               

               Conread position:
               548-682
               

               Cow position:
               chr6:456689-456827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               27, 50
               

               Conread position:
               548-707
               

               Cow position:
               chr6:56754427-56754591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               548-709
               

               Cow position:
               chr6:43770646-43770801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               548-717
               

               Cow position:
               chr6:22876669-22876841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               548-718
               

               Cow position:
               chr6:33510048-33509875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               548-718
               

               Cow position:
               chr6:46558312-46558146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               548-721
               

               Cow position:
               chr6:8186926-8187105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               548-722
               

               Cow position:
               chr6:67574645-67574472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               112, 18
               

               Conread position:
               548-726
               

               Cow position:
               chr6:6063030-6063211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               8, 172
               

               Conread position:
               548-726
               

               Cow position:
               chr6:16137507-16137688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               25, 172
               

               Conread position:
               548-726
               

               Cow position:
               chr6:67290396-67290573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               106, 11
               

               Conread position:
               548-727
               

               Cow position:
               chr6:27888602-27888433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               548-727
               

               Cow position:
               chr6:49686078-49685899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               113, 21
               

               Conread position:
               548-732
               

               Cow position:
               chr6:16502784-16502969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               58, 25
               

               Conread position:
               548-739
               

               Cow position:
               chr6:15974266-15974454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               104, 28
               

               Conread position:
               548-740
               

               Cow position:
               chr6:3937047-3936848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               548-740
               

               Cow position:
               chr6:13565342-13565155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               101, 10
               

               Conread position:
               548-744
               

               Cow position:
               chr6:3351286-3351093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               111, 15
               

               Conread position:
               548-744
               

               Cow position:
               chr6:6201691-6201489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               91, 21
               

               Conread position:
               548-747
               

               Cow position:
               chr6:21293237-21293432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 103
               

               Conread position:
               548-747
               

               Cow position:
               chr6:24536267-24536470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               89, 173
               

               Conread position:
               548-747
               

               Cow position:
               chr6:28088788-28088986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               113, 85
               

               Conread position:
               548-747
               

               Cow position:
               chr6:30983772-30983581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               102, 25
               

               Conread position:
               548-747
               

               Cow position:
               chr6:58304673-58304476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               27, 59
               

               Conread position:
               548-747
               

               Cow position:
               chr6:58697372-58697570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               113, 23
               

               Conread position:
               548-747
               

               Cow position:
               chr6:65702147-65702351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 174
               

               Conread position:
               548-749
               

               Cow position:
               chr6:17313998-17313795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               13, 109
               

               Conread position:
               548-750
               

               Cow position:
               chr6:44543883-44544090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               22, 174
               

               Conread position:
               548-764
               

               Cow position:
               chr6:55015144-55014923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               14, 56
               

               Conread position:
               548-791
               

               Cow position:
               chr6:26155404-26155168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               113, 35
               

               Conread position:
               549-695
               

               Cow position:
               chr6:67069557-67069699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               112, 50
               

               Conread position:
               549-714
               

               Cow position:
               chr6:8369682-8369514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               549-714
               

               Cow position:
               chr6:12099432-12099594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               549-717
               

               Cow position:
               chr6:18080258-18080426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               105, 142
               

               Conread position:
               549-726
               

               Cow position:
               chr6:34475298-34475478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               21, 171
               

               Conread position:
               549-726
               

               Cow position:
               chr6:53732246-53732064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               18, 173
               

               Conread position:
               549-744
               

               Cow position:
               chr6:55417275-55417463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               549-747
               

               Cow position:
               chr6:15058631-15058438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               84, 20
               

               Conread position:
               549-747
               

               Cow position:
               chr6:35180996-35181195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               112, 169
               

               Conread position:
               550-669
               

               Cow position:
               chr6:12711535-12711655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               550-677
               

               Cow position:
               chr6:36267258-36267126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               550-683
               

               Cow position:
               chr6:51019408-51019273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               108, 132
               

               Conread position:
               550-703
               

               Cow position:
               chr6:15256762-15256918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               550-704
               

               Cow position:
               chr6:34076421-34076269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 96
               

               Conread position:
               550-709
               

               Cow position:
               chr6:44636257-44636412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               550-713
               

               Cow position:
               chr6:18152645-18152486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               550-713
               

               Cow position:
               chr6:31928895-31928730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               111, 19
               

               Conread position:
               550-713
               

               Cow position:
               chr6:35775742-35775575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               550-713
               

               Cow position:
               chr6:57320340-57320504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               550-714
               

               Cow position:
               chr6:7628225-7628060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               111, 19
               

               Conread position:
               550-714
               

               Cow position:
               chr6:27219421-27219260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               550-714
               

               Cow position:
               chr6:35728106-35727942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               103, 55
               

               Conread position:
               550-714
               

               Cow position:
               chr6:47989685-47989518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               23, 101
               

               Conread position:
               550-714
               

               Cow position:
               chr6:66947563-66947729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 107
               

               Conread position:
               550-717
               

               Cow position:
               chr6:47151074-47150909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               550-726
               

               Cow position:
               chr6:18776502-18776333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               108, 19
               

               Conread position:
               550-726
               

               Cow position:
               chr6:23024838-23025018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 171
               

               Conread position:
               550-726
               

               Cow position:
               chr6:54622706-54622883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               101, 50
               

               Conread position:
               550-727
               

               Cow position:
               chr6:21052187-21052368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               23, 171
               

               Conread position:
               550-727
               

               Cow position:
               chr6:24776395-24776220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               108, 43
               

               Conread position:
               550-727
               

               Cow position:
               chr6:69374575-69374751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               20, 149
               

               Conread position:
               550-731
               

               Cow position:
               chr6:28559798-28559615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               28, 169
               

               Conread position:
               550-731
               

               Cow position:
               chr6:36164003-36163822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               108, 168
               

               Conread position:
               550-732
               

               Cow position:
               chr6:14150125-14150303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               113, 19
               

               Conread position:
               550-732
               

               Cow position:
               chr6:67187934-67187761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               550-735
               

               Cow position:
               chr6:56986393-56986577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               108, 13
               

               Conread position:
               550-735
               

               Cow position:
               chr6:64432193-64432012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               19, 84
               

               Conread position:
               550-745
               

               Cow position:
               chr6:52478154-52478347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               550-747
               

               Cow position:
               chr6:7801143-7801335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               112, 52
               

               Conread position:
               550-747
               

               Cow position:
               chr6:8731672-8731475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 24
               

               Conread position:
               550-747
               

               Cow position:
               chr6:16380808-16380606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               23, 172
               

               Conread position:
               550-747
               

               Cow position:
               chr6:35726348-35726156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 101
               

               Conread position:
               550-747
               

               Cow position:
               chr6:41657522-41657329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 99
               

               Conread position:
               550-747
               

               Cow position:
               chr6:54846017-54846217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 170
               

               Conread position:
               550-750
               

               Cow position:
               chr6:37395144-37395342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 101
               

               Conread position:
               550-750
               

               Cow position:
               chr6:57248773-57248574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               551-717
               

               Cow position:
               chr6:43906425-43906594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               551-726
               

               Cow position:
               chr6:6614879-6614704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               100, 17
               

               Conread position:
               551-726
               

               Cow position:
               chr6:21715308-21715133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               10, 166
               

               Conread position:
               551-744
               

               Cow position:
               chr6:53932589-53932781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               112, 166
               

               Conread position:
               551-747
               

               Cow position:
               chr6:4469021-4468830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               110, 18
               

               Conread position:
               551-747
               

               Cow position:
               chr6:16091153-16090965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               174, 101
               

               Conread position:
               551-747
               

               Cow position:
               chr6:18440223-18440416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               111, 18
               

               Conread position:
               551-747
               

               Cow position:
               chr6:21183968-21184161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               110, 18
               

               Conread position:
               551-747
               

               Cow position:
               chr6:63020596-63020404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               175, 17
               

               Conread position:
               551-750
               

               Cow position:
               chr6:30024138-30023944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               551-754
               

               Cow position:
               chr6:4048891-4049103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 185
               

               Conread position:
               551-758
               

               Cow position:
               chr6:67543798-67544007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               22, 177
               

               Conread position:
               552-713
               

               Cow position:
               chr6:47540587-47540749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               102, 16
               

               Conread position:
               552-714
               

               Cow position:
               chr6:68594246-68594078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 51
               

               Conread position:
               552-723
               

               Cow position:
               chr6:49824837-49825010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               552-726
               

               Cow position:
               chr6:54889860-54889682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               19, 168
               

               Conread position:
               552-732
               

               Cow position:
               chr6:46462126-46462306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               108, 165
               

               Conread position:
               552-732
               

               Cow position:
               chr6:54854508-54854326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               16, 153
               

               Conread position:
               552-746
               

               Cow position:
               chr6:29851622-29851431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               552-747
               

               Cow position:
               chr6:53546283-53546097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               552-747
               

               Cow position:
               chr6:54679787-54679589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 168
               

               Conread position:
               552-750
               

               Cow position:
               chr6:44867294-44867484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               552-752
               

               Cow position:
               chr6:60273755-60273954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               21, 35
               

               Conread position:
               552-768
               

               Cow position:
               chr6:38207232-38207448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 19
               

               Conread position:
               553-657
               

               Cow position:
               chr6:63209999-63210103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               553-708
               

               Cow position:
               chr6:56676593-56676436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               101, 131
               

               Conread position:
               553-712
               

               Cow position:
               chr6:62370935-62371086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               553-726
               

               Cow position:
               chr6:36808948-36809122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               108, 165
               

               Conread position:
               553-726
               

               Cow position:
               chr6:47790544-47790717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               105, 164
               

               Conread position:
               553-727
               

               Cow position:
               chr6:1173693-1173875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               102, 172
               

               Conread position:
               553-728
               

               Cow position:
               chr6:24651727-24651901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               553-747
               

               Cow position:
               chr6:11247023-11246826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 117
               

               Conread position:
               553-747
               

               Cow position:
               chr6:14383928-14383737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 15
               

               Conread position:
               553-749
               

               Cow position:
               chr6:1866988-1866791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 103
               

               Conread position:
               553-763
               

               Cow position:
               chr6:53711656-53711447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               103, 20
               

               Conread position:
               553-779
               

               Cow position:
               chr6:50467396-50467168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 169
               

               Conread position:
               553-789
               

               Cow position:
               chr6:42483669-42483437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               105, 163
               

               Conread position:
               554-693
               

               Cow position:
               chr6:29775871-29775725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               554-714
               

               Cow position:
               chr6:16016287-16016126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               107, 15
               

               Conread position:
               554-714
               

               Cow position:
               chr6:62224673-62224514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               108, 15
               

               Conread position:
               554-726
               

               Cow position:
               chr6:68127992-68127820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 75
               

               Conread position:
               554-727
               

               Cow position:
               chr6:65264299-65264464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               554-732
               

               Cow position:
               chr6:38853406-38853582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               91, 16
               

               Conread position:
               554-735
               

               Cow position:
               chr6:16411865-16411684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               104, 15
               

               Conread position:
               554-747
               

               Cow position:
               chr6:21470176-21470367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               15, 94
               

               Conread position:
               554-747
               

               Cow position:
               chr6:24491284-24491090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               150, 22
               

               Conread position:
               554-750
               

               Cow position:
               chr6:56799638-56799836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               98, 185
               

               Conread position:
               554-752
               

               Cow position:
               chr6:50090900-50090699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               19, 166
               

               Conread position:
               554-789
               

               Cow position:
               chr6:57079680-57079445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               15, 165
               

               Conread position:
               555-714
               

               Cow position:
               chr6:28148513-28148349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               63, 12
               

               Conread position:
               555-714
               

               Cow position:
               chr6:37994457-37994302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               19, 82
               

               Conread position:
               555-732
               

               Cow position:
               chr6:53460319-53460493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               50, 91
               

               Conread position:
               555-745
               

               Cow position:
               chr6:2547515-2547319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               19, 168
               

               Conread position:
               555-746
               

               Cow position:
               chr6:23696248-23696063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               555-747
               

               Cow position:
               chr6:60186398-60186601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 173
               

               Conread position:
               555-750
               

               Cow position:
               chr6:26408248-26408446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               18, 165
               

               Conread position:
               555-750
               

               Cow position:
               chr6:46160954-46161148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               48, 17
               

               Conread position:
               556-687
               

               Cow position:
               chr6:57279926-57280063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               556-714
               

               Cow position:
               chr6:24339540-24339376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               556-714
               

               Cow position:
               chr6:37827698-37827854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               98, 12
               

               Conread position:
               556-718
               

               Cow position:
               chr6:34569667-34569496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               79, 125
               

               Conread position:
               556-749
               

               Cow position:
               chr6:45159804-45159998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               99, 162
               

               Conread position:
               557-700
               

               Cow position:
               chr6:13742239-13742092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               557-714
               

               Cow position:
               chr6:5445919-5445759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               557-746
               

               Cow position:
               chr6:63066092-63065889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               558-687
               

               Cow position:
               chr6:16700506-16700371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               558-714
               

               Cow position:
               chr6:57935325-57935480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               558-714
               

               Cow position:
               chr6:66302357-66302513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 89
               

               Conread position:
               558-727
               

               Cow position:
               chr6:19996867-19996696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               10, 132
               

               Conread position:
               558-732
               

               Cow position:
               chr6:10039979-10039800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               13, 164
               

               Conread position:
               558-735
               

               Cow position:
               chr6:46173009-46173185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               100, 82
               

               Conread position:
               558-743
               

               Cow position:
               chr6:5095293-5095476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               104, 41
               

               Conread position:
               558-746
               

               Cow position:
               chr6:7128154-7128340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               16, 88
               

               Conread position:
               559-692
               

               Cow position:
               chr6:43606993-43607130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               559-704
               

               Cow position:
               chr6:57143445-57143594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               559-712
               

               Cow position:
               chr6:67374428-67374582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               14, 76
               

               Conread position:
               559-713
               

               Cow position:
               chr6:6117403-6117551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               559-713
               

               Cow position:
               chr6:21346903-21347057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               10, 95
               

               Conread position:
               559-714
               

               Cow position:
               chr6:10225402-10225563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               559-714
               

               Cow position:
               chr6:19754834-19754988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               99, 11
               

               Conread position:
               559-714
               

               Cow position:
               chr6:24903328-24903485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               559-714
               

               Cow position:
               chr6:47672903-47673055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 88
               

               Conread position:
               559-714
               

               Cow position:
               chr6:54406557-54406707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               559-726
               

               Cow position:
               chr6:17404811-17404643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 33
               

               Conread position:
               559-726
               

               Cow position:
               chr6:45471337-45471507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               14, 161
               

               Conread position:
               559-726
               

               Cow position:
               chr6:57089451-57089286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               104, 13
               

               Conread position:
               559-732
               

               Cow position:
               chr6:50984471-50984299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               13, 41
               

               Conread position:
               559-732
               

               Cow position:
               chr6:66839443-66839271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 94
               

               Conread position:
               559-742
               

               Cow position:
               chr6:60850947-60850767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               559-747
               

               Cow position:
               chr6:34423210-34423397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 101
               

               Conread position:
               559-747
               

               Cow position:
               chr6:36537114-36537299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               11, 94
               

               Conread position:
               559-747
               

               Cow position:
               chr6:45690371-45690548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-750
               

               Cow position:
               chr6:44194307-44194490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               13, 41
               

               Conread position:
               559-778
               

               Cow position:
               chr6:50452097-50451871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               8, 171
               

               Conread position:
               560-705
               

               Cow position:
               chr6:22502601-22502747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               95, 39
               

               Conread position:
               560-714
               

               Cow position:
               chr6:13097150-13097308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               560-714
               

               Cow position:
               chr6:56581807-56581966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               560-726
               

               Cow position:
               chr6:41014726-41014896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               11, 160
               

               Conread position:
               561-718
               

               Cow position:
               chr6:46466063-46465910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               561-740
               

               Cow position:
               chr6:19696055-19695875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               100, 155
               

               Conread position:
               563-699
               

               Cow position:
               chr6:33347238-33347105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               563-703
               

               Cow position:
               chr6:67633316-67633459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               563-714
               

               Cow position:
               chr6:8726921-8726770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               563-714
               

               Cow position:
               chr6:21083297-21083448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               563-726
               

               Cow position:
               chr6:55919687-55919852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               10, 156
               

               Conread position:
               563-727
               

               Cow position:
               chr6:39415068-39414904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               78, 23
               

               Conread position:
               563-747
               

               Cow position:
               chr6:5609198-5609385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               72, 157
               

               Conread position:
               563-749
               

               Cow position:
               chr6:19563235-19563424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               92, 157
               

               Conread position:
               563-750
               

               Cow position:
               chr6:54821078-54820890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               98, 149
               

               Conread position:
               563-754
               

               Cow position:
               chr6:19225148-19225326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               565-714
               

               Cow position:
               chr6:38033100-38032950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               565-726
               

               Cow position:
               chr6:66329461-66329620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               86, 36
               

               Conread position:
               565-756
               

               Cow position:
               chr6:42567738-42567546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               92, 158
               

               Conread position:
               566-732
               

               Cow position:
               chr6:47959046-47958888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               567-744
               

               Cow position:
               chr6:33150054-33150227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               88, 29
               

               Conread position:
               567-746
               

               Cow position:
               chr6:32006215-32006392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               5, 88
               

               Conread position:
               568-718
               

               Cow position:
               chr6:611783-611638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               6, 87
               

               Conread position:
               568-726
               

               Cow position:
               chr6:32336278-32336114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 155
               

               Conread position:
               569-679
               

               Cow position:
               chr6:59773704-59773591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               569-680
               

               Cow position:
               chr6:16738853-16738739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               569-689
               

               Cow position:
               chr6:65831601-65831478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               569-692
               

               Cow position:
               chr6:693907-694029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               569-695
               

               Cow position:
               chr6:38550389-38550515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 32
               

               Conread position:
               569-708
               

               Cow position:
               chr6:30688273-30688413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               92, 9
               

               Conread position:
               569-712
               

               Cow position:
               chr6:31847006-31847146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               569-713
               

               Cow position:
               chr6:53138700-53138843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               89, 63
               

               Conread position:
               569-714
               

               Cow position:
               chr6:12669336-12669188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 102
               

               Conread position:
               569-714
               

               Cow position:
               chr6:15243077-15242929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               569-714
               

               Cow position:
               chr6:57545991-57546136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               92, 30
               

               Conread position:
               569-714
               

               Cow position:
               chr6:61631370-61631516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               86, 30
               

               Conread position:
               569-714
               

               Cow position:
               chr6:66058471-66058615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               569-714
               

               Cow position:
               chr6:68272841-68272695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               569-716
               

               Cow position:
               chr6:4323560-4323420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               569-717
               

               Cow position:
               chr6:32126290-32126146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               569-718
               

               Cow position:
               chr6:3330234-3330082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               569-718
               

               Cow position:
               chr6:7291549-7291404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               569-718
               

               Cow position:
               chr6:35318896-35319045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               86, 9
               

               Conread position:
               569-718
               

               Cow position:
               chr6:45920982-45921125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               569-718
               

               Cow position:
               chr6:55061108-55060951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               569-725
               

               Cow position:
               chr6:8326036-8325880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 147
               

               Conread position:
               569-726
               

               Cow position:
               chr6:16357679-16357519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 150
               

               Conread position:
               569-726
               

               Cow position:
               chr6:28561930-28562086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               89, 105
               

               Conread position:
               569-726
               

               Cow position:
               chr6:45979945-45980104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 150
               

               Conread position:
               569-726
               

               Cow position:
               chr6:59687572-59687730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               92, 149
               

               Conread position:
               569-726
               

               Cow position:
               chr6:62805883-62805725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               92, 149
               

               Conread position:
               569-727
               

               Cow position:
               chr6:16627967-16627816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               569-727
               

               Cow position:
               chr6:21175572-21175419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               569-727
               

               Cow position:
               chr6:26054662-26054823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               86, 151
               

               Conread position:
               569-727
               

               Cow position:
               chr6:36225348-36225190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               77, 148
               

               Conread position:
               569-727
               

               Cow position:
               chr6:57467837-57467678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               92, 149
               

               Conread position:
               569-729
               

               Cow position:
               chr6:54831716-54831555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               90, 101
               

               Conread position:
               569-730
               

               Cow position:
               chr6:18117810-18117970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               5, 91
               

               Conread position:
               569-732
               

               Cow position:
               chr6:1103507-1103662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               92, 23
               

               Conread position:
               569-732
               

               Cow position:
               chr6:15300602-15300756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               569-732
               

               Cow position:
               chr6:25772981-25773142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               76, 62
               

               Conread position:
               569-732
               

               Cow position:
               chr6:34463352-34463511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               16, 82
               

               Conread position:
               569-732
               

               Cow position:
               chr6:56850255-56850096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               569-734
               

               Cow position:
               chr6:30501886-30502054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               24, 150
               

               Conread position:
               569-734
               

               Cow position:
               chr6:51543140-51542972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               28, 137
               

               Conread position:
               569-739
               

               Cow position:
               chr6:63168525-63168698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               88, 150
               

               Conread position:
               569-745
               

               Cow position:
               chr6:24468161-24468332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               569-747
               

               Cow position:
               chr6:120475-120307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               569-747
               

               Cow position:
               chr6:143140-143313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               569-747
               

               Cow position:
               chr6:10105745-10105917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               569-747
               

               Cow position:
               chr6:21535278-21535101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 90
               

               Conread position:
               569-747
               

               Cow position:
               chr6:48097365-48097539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               128, 30
               

               Conread position:
               569-747
               

               Cow position:
               chr6:50883441-50883614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               569-747
               

               Cow position:
               chr6:53024573-53024742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               569-747
               

               Cow position:
               chr6:55282054-55282232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 22
               

               Conread position:
               569-747
               

               Cow position:
               chr6:55296854-55297033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               95, 149
               

               Conread position:
               569-747
               

               Cow position:
               chr6:58725605-58725432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               569-747
               

               Cow position:
               chr6:66293721-66293546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               93, 36
               

               Conread position:
               569-747
               

               Cow position:
               chr6:66979109-66978931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               24, 150
               

               Conread position:
               569-749
               

               Cow position:
               chr6:8966326-8966157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               154, 70
               

               Conread position:
               569-749
               

               Cow position:
               chr6:60143961-60144138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               569-750
               

               Cow position:
               chr6:48157153-48157334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               85, 43
               

               Conread position:
               569-750
               

               Cow position:
               chr6:53765655-53765832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 128
               

               Conread position:
               569-750
               

               Cow position:
               chr6:68246593-68246775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               84, 149
               

               Conread position:
               569-753
               

               Cow position:
               chr6:43540024-43540196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               174, 76
               

               Conread position:
               569-765
               

               Cow position:
               chr6:53811824-53811627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               77, 150
               

               Conread position:
               569-767
               

               Cow position:
               chr6:25614852-25615052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               87, 183
               

               Conread position:
               570-707
               

               Cow position:
               chr6:62849158-62849025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               570-727
               

               Cow position:
               chr6:34721874-34722023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 82
               

               Conread position:
               570-732
               

               Cow position:
               chr6:30825540-30825692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               570-747
               

               Cow position:
               chr6:54127584-54127751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               570-750
               

               Cow position:
               chr6:47246019-47245839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               82, 148
               

               Conread position:
               571-712
               

               Cow position:
               chr6:23381430-23381574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               571-714
               

               Cow position:
               chr6:16387468-16387614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               571-727
               

               Cow position:
               chr6:10163910-10163747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 153
               

               Conread position:
               571-731
               

               Cow position:
               chr6:59101083-59101244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               90, 147
               

               Conread position:
               571-740
               

               Cow position:
               chr6:66259973-66259798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               90, 152
               

               Conread position:
               571-743
               

               Cow position:
               chr6:62724794-62724621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               89, 151
               

               Conread position:
               571-747
               

               Cow position:
               chr6:18447279-18447455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               90, 147
               

               Conread position:
               571-747
               

               Cow position:
               chr6:21475961-21475789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               571-747
               

               Cow position:
               chr6:40032415-40032252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               571-747
               

               Cow position:
               chr6:66434190-66434012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               90, 149
               

               Conread position:
               571-750
               

               Cow position:
               chr6:8366050-8365870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               83, 147
               

               Conread position:
               571-756
               

               Cow position:
               chr6:62079154-62078976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               571-759
               

               Cow position:
               chr6:15587356-15587544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               90, 147
               

               Conread position:
               571-762
               

               Cow position:
               chr6:59297281-59297099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               572-688
               

               Cow position:
               chr6:60674066-60673953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               572-711
               

               Cow position:
               chr6:59759404-59759266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               572-714
               

               Cow position:
               chr6:60347390-60347535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               572-725
               

               Cow position:
               chr6:36203056-36202902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               88, 146
               

               Conread position:
               572-727
               

               Cow position:
               chr6:45094813-45094654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 149
               

               Conread position:
               572-732
               

               Cow position:
               chr6:48436065-48435907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               89, 36
               

               Conread position:
               572-744
               

               Cow position:
               chr6:47520289-47520118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 144
               

               Conread position:
               572-746
               

               Cow position:
               chr6:21350796-21350970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               66, 137
               

               Conread position:
               572-747
               

               Cow position:
               chr6:12761515-12761341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               89, 37
               

               Conread position:
               572-747
               

               Cow position:
               chr6:13367517-13367347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               572-747
               

               Cow position:
               chr6:15937617-15937793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               85, 146
               

               Conread position:
               572-747
               

               Cow position:
               chr6:36939109-36938929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               68, 150
               

               Conread position:
               572-749
               

               Cow position:
               chr6:5844933-5845111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               87, 145
               

               Conread position:
               572-768
               

               Cow position:
               chr6:19264266-19264457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 28
               

               Conread position:
               573-706
               

               Cow position:
               chr6:61883939-61884074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               92, 109
               

               Conread position:
               573-718
               

               Cow position:
               chr6:40833787-40833926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               573-727
               

               Cow position:
               chr6:19045862-19045704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               67, 148
               

               Conread position:
               573-747
               

               Cow position:
               chr6:43345206-43345380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               83, 144
               

               Conread position:
               573-749
               

               Cow position:
               chr6:44541038-44540867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               574-732
               

               Cow position:
               chr6:19446486-19446326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               59, 87
               

               Conread position:
               574-745
               

               Cow position:
               chr6:39358110-39358277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               576-739
               

               Cow position:
               chr6:63182516-63182358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               577-728
               

               Cow position:
               chr6:32453619-32453466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               30, 114
               

               Conread position:
               577-747
               

               Cow position:
               chr6:39093975-39093813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               577-763
               

               Cow position:
               chr6:48379381-48379567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               84, 141
               

               Conread position:
               578-770
               

               Cow position:
               chr6:60740239-60740054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               579-747
               

               Cow position:
               chr6:41375998-41375834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               87, 137
               

               Conread position:
               580-713
               

               Cow position:
               chr6:48793007-48792871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               580-718
               

               Cow position:
               chr6:41733862-41733721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               580-726
               

               Cow position:
               chr6:14471592-14471445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               81, 138
               

               Conread position:
               580-726
               

               Cow position:
               chr6:47450692-47450839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               74, 138
               

               Conread position:
               580-727
               

               Cow position:
               chr6:34380589-34380733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 52
               

               Conread position:
               580-727
               

               Cow position:
               chr6:61644629-61644777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               81, 138
               

               Conread position:
               580-732
               

               Cow position:
               chr6:2758009-2757861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               580-747
               

               Cow position:
               chr6:14263662-14263829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               78, 118
               

               Conread position:
               580-756
               

               Cow position:
               chr6:47022786-47022614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               580-768
               

               Cow position:
               chr6:54133038-54132857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               72, 42
               

               Conread position:
               581-741
               

               Cow position:
               chr6:40682442-40682599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               581-747
               

               Cow position:
               chr6:2585167-2585004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               583-732
               

               Cow position:
               chr6:30895767-30895915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               79, 5
               

               Conread position:
               584-713
               

               Cow position:
               chr6:61681301-61681171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               584-719
               

               Cow position:
               chr6:23109968-23110106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               584-762
               

               Cow position:
               chr6:51835621-51835446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               584-763
               

               Cow position:
               chr6:15305794-15305616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               65, 134
               

               Conread position:
               586-714
               

               Cow position:
               chr6:28483238-28483109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               592-723
               

               Cow position:
               chr6:53235438-53235569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 72
               

               Conread position:
               592-743
               

               Cow position:
               chr6:36920760-36920909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               51, 81
               

               Conread position:
               592-747
               

               Cow position:
               chr6:8125544-8125388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               69, 127
               

               Conread position:
               592-747
               

               Cow position:
               chr6:35842875-35842720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               66, 125
               

               Conread position:
               601-749
               

               Cow position:
               chr6:69153618-69153469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               61, 117
               

               Conread position:
               602-735
               

               Cow position:
               chr6:31865300-31865166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               57, 116
               

               Conread position:
               606-749
               

               Cow position:
               chr6:2153395-2153539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               56, 112
               

               Conread position:
               613-727
               

               Cow position:
               chr6:58076590-58076475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               49, 105
               

               Conread position:
               615-747
               

               Cow position:
               chr6:21590897-21590769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               32, 0
               
Show alignments to all cow chromosomes.
Conread position:	487-766
Cow position:	chr6:12928456-12928186 (view UCSC Genome Browser custom track)
Alignm length:	281
Alignm identity:	190
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	239, 27
Conread position:	496-727
Cow position:	chr6:38610289-38610050 (view UCSC Genome Browser custom track)
Alignm length:	243
Alignm identity:	168
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	29, 158
Conread position:	501-709
Cow position:	chr6:63233823-63233613 (view UCSC Genome Browser custom track)
Alignm length:	214
Alignm identity:	146
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	15, 41
Conread position:	503-747
Cow position:	chr6:10175997-10176240 (view UCSC Genome Browser custom track)
Alignm length:	248
Alignm identity:	166
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	158, 18
Conread position:	510-699
Cow position:	chr6:66590366-66590182 (view UCSC Genome Browser custom track)
Alignm length:	192
Alignm identity:	138
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	28, 16
Conread position:	515-718
Cow position:	chr6:44566724-44566513 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	152
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	22, 161
Conread position:	515-726
Cow position:	chr6:632949-633170 (view UCSC Genome Browser custom track)
Alignm length:	224
Alignm identity:	158
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	49, 210
Conread position:	524-713
Cow position:	chr6:59104884-59104696 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	140
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	84, 7
Conread position:	524-714
Cow position:	chr6:26764540-26764735 (view UCSC Genome Browser custom track)
Alignm length:	198
Alignm identity:	149
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	48, 13
Conread position:	525-747
Cow position:	chr6:13687532-13687750 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	157
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	12, 60
Conread position:	528-732
Cow position:	chr6:14913960-14914159 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	153
Alignm E-value:	5e-29
Alignm gaps (pig, cow):	124, 19
Conread position:	529-747
Cow position:	chr6:55548258-55548472 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	158
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	134, 17
Conread position:	533-726
Cow position:	chr6:26638664-26638470 (view UCSC Genome Browser custom track)
Alignm length:	199
Alignm identity:	142
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	125, 43
Conread position:	534-752
Cow position:	chr6:38640502-38640290 (view UCSC Genome Browser custom track)
Alignm length:	221
Alignm identity:	158
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	112, 35
Conread position:	535-743
Cow position:	chr6:56061935-56061726 (view UCSC Genome Browser custom track)
Alignm length:	212
Alignm identity:	143
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	124, 183
Conread position:	536-727
Cow position:	chr6:24110555-24110363 (view UCSC Genome Browser custom track)
Alignm length:	195
Alignm identity:	144
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	125, 184
Conread position:	536-752
Cow position:	chr6:62670141-62669922 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	163
Alignm E-value:	8e-33
Alignm gaps (pig, cow):	98, 14
Conread position:	539-747
Cow position:	chr6:23058481-23058273 (view UCSC Genome Browser custom track)
Alignm length:	212
Alignm identity:	146
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	118, 30
Conread position:	540-714
Cow position:	chr6:3952787-3952611 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	140
Alignm E-value:	3e-36
Alignm gaps (pig, cow):	118, 10
Conread position:	540-718
Cow position:	chr6:42035034-42034861 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	134
Alignm E-value:	5e-29
Alignm gaps (pig, cow):	23, 0