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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8021N21.3
        

               
Conread position:
               
15-155
               

               
Cow position:
               
chr12:47485899-47485757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
16-120
               

               
Cow position:
               
chr12:30801042-30800936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-139
               

               
Cow position:
               
chr12:20312793-20312918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-139
               

               
Cow position:
               
chr12:21212396-21212271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-139
               

               
Cow position:
               
chr12:21432954-21432829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-139
               

               
Cow position:
               
chr12:21665750-21665625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-139
               

               
Cow position:
               
chr12:32147018-32147142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 62
               

               
Conread position:
               
16-141
               

               
Cow position:
               
chr12:34965058-34964931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-145
               

               
Cow position:
               
chr12:30593496-30593627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-146
               

               
Cow position:
               
chr12:34514278-34514409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
81, 95
               

               
Conread position:
               
16-147
               

               
Cow position:
               
chr12:1511153-1511286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
16-147
               

               
Cow position:
               
chr12:12928298-12928431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-147
               

               
Cow position:
               
chr12:18116012-18115882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-147
               

               
Cow position:
               
chr12:25265721-25265854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-150
               

               
Cow position:
               
chr12:7646007-7646143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-150
               

               
Cow position:
               
chr12:19871848-19871710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
16-151
               

               
Cow position:
               
chr12:19693607-19693744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:62825-62689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
82, 108
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:464998-465136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:1007628-1007490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:1406059-1405921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:1855247-1855385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:1865295-1865433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:2229183-2229045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:4965225-4965363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:5273756-5273890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:6186539-6186674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:6404175-6404313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:6530204-6530065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:7872984-7872846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:8839866-8839728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:8970401-8970539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:9988088-9988223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 107
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:10076270-10076132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:10359306-10359171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:10490672-10490532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:10790634-10790772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:12788143-12788281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:13042628-13042767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:14214673-14214535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:14423969-14423831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:14811396-14811533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 112
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:14940577-14940439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:15719958-15720092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:15821331-15821193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:15925141-15925279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:17718908-17718773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 38
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:17787029-17787167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:18297272-18297134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:18724363-18724225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:21250702-21250840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:21452365-21452503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:21672322-21672460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:21718560-21718698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:21723726-21723589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
81, 94
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:22979281-22979419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:23137716-23137854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:24028871-24029009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:24981319-24981181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:25148006-25148144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:25838896-25838758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:26223758-26223895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:26268604-26268742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:26333333-26333195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:27455213-27455351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:28012619-28012757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:28708013-28708150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:31027208-31027346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:32011165-32011303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:32340404-32340266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:32700377-32700239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:32758308-32758170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:32900540-32900678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:32917939-32917804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 102
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:34177167-34177029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:34365801-34365663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:35163395-35163257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:35459371-35459233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:36445997-36445860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
81, 127
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:37562612-37562478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 59
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:37832261-37832123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:38893975-38893838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:39930777-39930639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:40270996-40271132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 63
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:40306882-40306740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:41185182-41185044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:41973163-41973300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
82, 52
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:42604572-42604710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:43681615-43681479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:44758035-44757897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:46104725-46104863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-152
               

               
Cow position:
               
chr12:46111505-46111643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-153
               

               
Cow position:
               
chr12:1055897-1056036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
16-153
               

               
Cow position:
               
chr12:5226842-5226703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-153
               

               
Cow position:
               
chr12:7651228-7651366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 52
               

               
Conread position:
               
16-153
               

               
Cow position:
               
chr12:8542267-8542406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-153
               

               
Cow position:
               
chr12:8718757-8718896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-153
               

               
Cow position:
               
chr12:11582764-11582629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
70, 57
               

               
Conread position:
               
16-153
               

               
Cow position:
               
chr12:20317145-20317281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
81, 107
               

               
Conread position:
               
16-153
               

               
Cow position:
               
chr12:21611208-21611072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
16-153
               

               
Cow position:
               
chr12:30011359-30011497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
81, 104
               

               
Conread position:
               
16-153
               

               
Cow position:
               
chr12:30016466-30016604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
81, 104
               

               
Conread position:
               
16-153
               

               
Cow position:
               
chr12:31533231-31533371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-153
               

               
Cow position:
               
chr12:32088847-32088708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-155
               

               
Cow position:
               
chr12:5713574-5713432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
17-140
               

               
Cow position:
               
chr12:12754555-12754680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
17-143
               

               
Cow position:
               
chr12:27054962-27054835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
17-151
               

               
Cow position:
               
chr12:4782368-4782504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 115
               

               
Conread position:
               
17-152
               

               
Cow position:
               
chr12:5800392-5800254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
17-152
               

               
Cow position:
               
chr12:11558530-11558665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-152
               

               
Cow position:
               
chr12:22286324-22286460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
17-152
               

               
Cow position:
               
chr12:39610797-39610933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
17-153
               

               
Cow position:
               
chr12:22594363-22594228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
80, 68
               

               
Conread position:
               
17-186
               

               
Cow position:
               
chr12:18010793-18010623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 153
               

               
Conread position:
               
18-152
               

               
Cow position:
               
chr12:37697866-37697998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
21-132
               

               
Cow position:
               
chr12:42855946-42856057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-133
               

               
Cow position:
               
chr12:21904978-21904864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
21-138
               

               
Cow position:
               
chr12:19198623-19198508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
21-143
               

               
Cow position:
               
chr12:19851695-19851571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
21-145
               

               
Cow position:
               
chr12:21579178-21579306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
21-149
               

               
Cow position:
               
chr12:3070469-3070340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
80, 122
               

               
Conread position:
               
21-150
               

               
Cow position:
               
chr12:8673842-8673975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
21-151
               

               
Cow position:
               
chr12:14568217-14568349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:249714-249847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:551006-551139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:1408440-1408308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 99
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:1437159-1437291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 7
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:3545259-3545126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:3716666-3716799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:5110460-5110590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:6491706-6491839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:8172512-8172379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:9106804-9106671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:9886401-9886535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:10227348-10227216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 7
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:11101855-11101722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:20218103-20217972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
77, 115
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:21557554-21557421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:22202074-22202207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:22480725-22480598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:23475357-23475224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:25260145-25260278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:27435558-27435691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:27506043-27506175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 7
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:27929119-27929252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:27994706-27994575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:28763408-28763541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
76, 126
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:31328723-31328855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:33297236-33297104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 102
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:40867940-40867807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:41337625-41337758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:42060585-42060453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
72, 116
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr12:47415408-47415279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
21-153
               

               
Cow position:
               
chr12:6695489-6695355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
21-153
               

               
Cow position:
               
chr12:8770368-8770234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
21-153
               

               
Cow position:
               
chr12:15939274-15939407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 93
               

               
Conread position:
               
21-153
               

               
Cow position:
               
chr12:27852047-27852181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
21-153
               

               
Cow position:
               
chr12:35311325-35311457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
21-154
               

               
Cow position:
               
chr12:9894107-9894241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 98
               

               
Conread position:
               
21-169
               

               
Cow position:
               
chr12:2967533-2967384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
77, 132
               

               
Conread position:
               
22-139
               

               
Cow position:
               
chr12:22517243-22517362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
22-152
               

               
Cow position:
               
chr12:1093507-1093376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
75, 109
               

               
Conread position:
               
22-152
               

               
Cow position:
               
chr12:3364493-3364361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
22-152
               

               
Cow position:
               
chr12:10931691-10931560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
22-152
               

               
Cow position:
               
chr12:15231633-15231501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
22-152
               

               
Cow position:
               
chr12:16465506-16465374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
22-152
               

               
Cow position:
               
chr12:22748822-22748690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
22-152
               

               
Cow position:
               
chr12:25313108-25313239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
22-152
               

               
Cow position:
               
chr12:37843650-37843782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
22-152
               

               
Cow position:
               
chr12:43533693-43533561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
22-153
               

               
Cow position:
               
chr12:21497297-21497428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
23-152
               

               
Cow position:
               
chr12:4004300-4004431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
23-152
               

               
Cow position:
               
chr12:7674507-7674376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
23-152
               

               
Cow position:
               
chr12:9142766-9142636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 60
               

               
Conread position:
               
23-152
               

               
Cow position:
               
chr12:29909427-29909558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
27-152
               

               
Cow position:
               
chr12:23039675-23039802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
28-148
               

               
Cow position:
               
chr12:26869655-26869774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 6
               

               
Conread position:
               
28-151
               

               
Cow position:
               
chr12:44766432-44766306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
28-152
               

               
Cow position:
               
chr12:16301738-16301864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
28-152
               

               
Cow position:
               
chr12:24755945-24756071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
28-152
               

               
Cow position:
               
chr12:47928693-47928573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 71
               

               
Conread position:
               
28-153
               

               
Cow position:
               
chr12:29499088-29499216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
29-151
               

               
Cow position:
               
chr12:17981993-17981869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
29-152
               

               
Cow position:
               
chr12:10171026-10171150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 45
               

               
Conread position:
               
29-152
               

               
Cow position:
               
chr12:27957926-27958051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
32-139
               

               
Cow position:
               
chr12:27987041-27987149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
32-152
               

               
Cow position:
               
chr12:40514715-40514591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
32-153
               

               
Cow position:
               
chr12:7885277-7885400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
35-142
               

               
Cow position:
               
chr12:758996-758889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-152
               

               
Cow position:
               
chr12:5905121-5905005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
42-152
               

               
Cow position:
               
chr12:10988940-10988828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
46-152
               

               
Cow position:
               
chr12:20459140-20459248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
46-152
               

               
Cow position:
               
chr12:40356927-40357035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
46-156
               

               
Cow position:
               
chr12:24658138-24658250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               
Show alignments to all cow chromosomes.