Cow genome map

Conread name: Ss1.1-Pig3-SRG8021N21.3

Conread position: 3-153
Cow position: chr9:42053001-42053153 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 6-152
Cow position: chr9:34238233-34238380 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 92, 26

Conread position: 16-128
Cow position: chr9:52723821-52723935 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 16-129
Cow position: chr9:30736993-30737107 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 63

Conread position: 16-130
Cow position: chr9:16218018-16217902 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 16-132
Cow position: chr9:12718109-12717991 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 16-138
Cow position: chr9:11750927-11751051 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 16-139
Cow position: chr9:20901507-20901382 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 16-140
Cow position: chr9:20578276-20578150 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 16-141
Cow position: chr9:37251529-37251402 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 16-142
Cow position: chr9:2834484-2834612 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 16-142
Cow position: chr9:30187222-30187094 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 16-142
Cow position: chr9:44169548-44169420 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 16-142
Cow position: chr9:56565046-56564918 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 16-142
Cow position: chr9:59162061-59162186 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 16-145
Cow position: chr9:174258-174389 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 16-145
Cow position: chr9:26431653-26431784 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 16-147
Cow position: chr9:16639791-16639658 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 16-147
Cow position: chr9:46682910-46682777 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 16-147
Cow position: chr9:47045464-47045331 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 16-147
Cow position: chr9:50002557-50002690 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 16-147
Cow position: chr9:64017701-64017833 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 16-148
Cow position: chr9:17307324-17307188 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 16-150
Cow position: chr9:13313074-13312938 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 16-150
Cow position: chr9:61739538-61739674 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 16-151
Cow position: chr9:125991-126124 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 53

Conread position: 16-151
Cow position: chr9:13472068-13472204 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 127

Conread position: 16-151
Cow position: chr9:51692114-51692246 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 16-151
Cow position: chr9:58747307-58747444 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 82, 47

Conread position: 16-152
Cow position: chr9:216494-216632 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:771732-771869 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 82, 91

Conread position: 16-152
Cow position: chr9:777294-777432 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:874170-874032 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:1070767-1070905 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 16-152
Cow position: chr9:1296400-1296538 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 16-152
Cow position: chr9:1570270-1570404 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 82, 64

Conread position: 16-152
Cow position: chr9:3052781-3052644 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 107

Conread position: 16-152
Cow position: chr9:3058108-3058246 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:3062104-3061966 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:3311806-3311667 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 16-152
Cow position: chr9:3717880-3717742 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:3744331-3744192 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:3959685-3959823 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 16-152
Cow position: chr9:4673573-4673434 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 104

Conread position: 16-152
Cow position: chr9:4862056-4862194 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 16-152
Cow position: chr9:5452123-5452261 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:6304953-6304815 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:6707401-6707539 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:6887095-6886957 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:7103714-7103852 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:9093797-9093935 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:9120134-9120272 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:9260758-9260896 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:9415715-9415576 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 16-152
Cow position: chr9:9442967-9442829 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:10803189-10803051 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:11312886-11312746 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 74, 67

Conread position: 16-152
Cow position: chr9:12378962-12378824 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:13158207-13158340 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 82, 27

Conread position: 16-152
Cow position: chr9:13181426-13181287 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:13493246-13493117 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 16-152
Cow position: chr9:13620480-13620618 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:14046179-14046044 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 38

Conread position: 16-152
Cow position: chr9:15052382-15052520 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:15670368-15670230 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:17018271-17018133 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:17060841-17060979 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:17634004-17633866 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 16-152
Cow position: chr9:18071997-18071860 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 81, 117

Conread position: 16-152
Cow position: chr9:18243466-18243604 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:18381487-18381627 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 16-152
Cow position: chr9:18711009-18710871 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:18831249-18831111 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:19222411-19222273 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:19546035-19545889 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 16-152
Cow position: chr9:21228732-21228594 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 16-152
Cow position: chr9:21459531-21459393 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 16-152
Cow position: chr9:22243155-22243293 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:22439883-22439745 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:24424039-24423901 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:25701676-25701814 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:26326262-26326124 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:26978377-26978240 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 81, 117

Conread position: 16-152
Cow position: chr9:27107063-27107200 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 82, 61

Conread position: 16-152
Cow position: chr9:28681717-28681579 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:28785859-28785721 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:28821934-28822070 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 120

Conread position: 16-152
Cow position: chr9:29083049-29083187 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 114

Conread position: 16-152
Cow position: chr9:29184507-29184369 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 16-152
Cow position: chr9:29534336-29534198 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:29835001-29835139 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:31416999-31417137 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:33067977-33068112 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 117

Conread position: 16-152
Cow position: chr9:33843840-33843702 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:33999749-33999613 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 120

Conread position: 16-152
Cow position: chr9:35592622-35592760 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 29

Conread position: 16-152
Cow position: chr9:36829535-36829673 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:36844428-36844562 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 16-152
Cow position: chr9:37173888-37174026 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:37253921-37253783 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:37908365-37908226 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:38634296-38634158 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:39303036-39303174 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:39971640-39971779 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:40316643-40316513 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 16-152
Cow position: chr9:42475570-42475704 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 81, 114

Conread position: 16-152
Cow position: chr9:42696485-42696351 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 98

Conread position: 16-152
Cow position: chr9:44202563-44202701 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:44920782-44920647 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 16-152
Cow position: chr9:45383743-45383605 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:46627827-46627690 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 82, 35

Conread position: 16-152
Cow position: chr9:47171570-47171432 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:48794775-48794913 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:49982014-49981875 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 16-152
Cow position: chr9:50327213-50327075 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:53603190-53603329 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 16-152
Cow position: chr9:54996140-54996009 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 119, 71

Conread position: 16-152
Cow position: chr9:56301068-56301206 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:56530895-56531033 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:58615177-58615314 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 29

Conread position: 16-152
Cow position: chr9:60409919-60409781 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 16-152
Cow position: chr9:61023438-61023576 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:62817704-62817842 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 16-152
Cow position: chr9:63563936-63563799 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 82, 52

Conread position: 16-152
Cow position: chr9:64011713-64011850 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 114

Conread position: 16-152
Cow position: chr9:64014349-64014486 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 114

Conread position: 16-153
Cow position: chr9:3997256-3997396 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 16-153
Cow position: chr9:4553311-4553171 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 88

Conread position: 16-153
Cow position: chr9:10643421-10643560 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 16-153
Cow position: chr9:12461691-12461552 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 16-153
Cow position: chr9:20321148-20321008 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 16-153
Cow position: chr9:26087494-26087631 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 65

Conread position: 16-153
Cow position: chr9:26577207-26577069 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 91

Conread position: 16-153
Cow position: chr9:34741998-34741860 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 82, 67

Conread position: 16-153
Cow position: chr9:50900133-50900270 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 36

Conread position: 16-153
Cow position: chr9:59540943-59540804 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 16-153
Cow position: chr9:64562710-64562576 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 16-154
Cow position: chr9:62669036-62669176 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 16-155
Cow position: chr9:2192210-2192069 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 16-155
Cow position: chr9:9405396-9405255 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 16-162
Cow position: chr9:36025588-36025737 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 16-175
Cow position: chr9:29330030-29329871 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 84

Conread position: 16-204
Cow position: chr9:32305940-32305748 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 138, 73

Conread position: 17-137
Cow position: chr9:34696660-34696541 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 17-152
Cow position: chr9:1997763-1997901 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 17-152
Cow position: chr9:5327850-5327987 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 17-152
Cow position: chr9:27038629-27038492 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 115
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 17-152
Cow position: chr9:55341666-55341529 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 17-153
Cow position: chr9:8951539-8951675 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 98

Conread position: 18-140
Cow position: chr9:22319006-22319133 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 18-152
Cow position: chr9:1062181-1062317 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 18-152
Cow position: chr9:5839636-5839771 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 80, 15

Conread position: 18-153
Cow position: chr9:46670435-46670299 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 115

Conread position: 19-152
Cow position: chr9:28726115-28725978 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 21-116
Cow position: chr9:38432200-38432297 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 21-137
Cow position: chr9:9558615-9558733 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 21-138
Cow position: chr9:44107570-44107454 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 21-139
Cow position: chr9:37100741-37100624 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 21-141
Cow position: chr9:18205571-18205449 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 21-142
Cow position: chr9:213916-213793 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 21-142
Cow position: chr9:3053602-3053479 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 21-147
Cow position: chr9:19155773-19155901 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 21-148
Cow position: chr9:19743583-19743713 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 21-149
Cow position: chr9:45974826-45974954 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 58

Conread position: 21-150
Cow position: chr9:4284733-4284603 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 89

Conread position: 21-150
Cow position: chr9:5628330-5628200 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 109

Conread position: 21-150
Cow position: chr9:20988805-20988674 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 21-150
Cow position: chr9:29516376-29516507 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 21-151
Cow position: chr9:6365885-6365756 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 105

Conread position: 21-151
Cow position: chr9:11477748-11477880 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 21-151
Cow position: chr9:60590294-60590165 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 11

Conread position: 21-152
Cow position: chr9:199315-199448 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 111
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 21-152
Cow position: chr9:976141-976271 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 21-152
Cow position: chr9:2201102-2200970 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 76, 102

Conread position: 21-152
Cow position: chr9:2208160-2208293 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 21-152
Cow position: chr9:2682000-2681867 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 21-152
Cow position: chr9:3388316-3388449 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 21-152
Cow position: chr9:3807106-3806973 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 21-152
Cow position: chr9:4191829-4191696 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 21-152
Cow position: chr9:6253076-6252943 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 21-152
Cow position: chr9:6764259-6764390 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 74, 58

Conread position: 21-152
Cow position: chr9:7006251-7006119 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 47

Conread position: 21-152
Cow position: chr9:7058543-7058672 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 59

Conread position: 21-152
Cow position: chr9:7844178-7844308 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 37

Conread position: 21-152
Cow position: chr9:9016584-9016453 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 116

Conread position: 21-152
Cow position: chr9:9491438-9491570 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 62

Conread position: 21-152
Cow position: chr9:9634169-9634035 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 49

Conread position: 21-152
Cow position: chr9:10326745-10326612 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 21-152
Cow position: chr9:10566849-10566982 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 81

Conread position: 21-152
Cow position: chr9:10857543-10857411 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 47

Conread position: 21-152
Cow position: chr9:12194946-12195078 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 56

Conread position: 21-152
Cow position: chr9:12285196-12285329 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 21-152
Cow position: chr9:16179096-16178963 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 115
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 76, 0

Conread position: 21-152
Cow position: chr9:17580199-17580332 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 21-152
Cow position: chr9:21412813-21412682 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 25

Conread position: 21-152
Cow position: chr9:22656310-22656177 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 21-152
Cow position: chr9:22803140-22803273 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 21-152
Cow position: chr9:24917776-24917909 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 21-152
Cow position: chr9:26064635-26064504 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 42

Conread position: 21-152
Cow position: chr9:26992546-26992409 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 21-152
Cow position: chr9:27781400-27781533 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 21-152
Cow position: chr9:28702962-28702829 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 21-152
Cow position: chr9:29106387-29106254 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 21-152
Cow position: chr9:30675586-30675453 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 112
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 21-152
Cow position: chr9:31811089-31810956 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 111
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 21-152
Cow position: chr9:34059121-34059254 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 21-152
Cow position: chr9:34523846-34523978 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 117

Conread position: 21-152
Cow position: chr9:34918117-34917988 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 77, 20

Conread position: 21-152
Cow position: chr9:37158100-37158233 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 21-152
Cow position: chr9:41317188-41317058 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 21-152
Cow position: chr9:42570728-42570594 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 21-152
Cow position: chr9:42868360-42868493 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 21-152
Cow position: chr9:49258996-49259128 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 32

Conread position: 21-152
Cow position: chr9:52753709-52753842 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 21-152
Cow position: chr9:54997407-54997268 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 21-152
Cow position: chr9:55032014-55031883 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 77, 58

Conread position: 21-152
Cow position: chr9:56177386-56177253 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 21-152
Cow position: chr9:58674397-58674530 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 112
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 21-152
Cow position: chr9:59454385-59454518 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 21-152
Cow position: chr9:59479345-59479478 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 21-153
Cow position: chr9:1938532-1938669 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 21-153
Cow position: chr9:3411389-3411521 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 60

Conread position: 21-153
Cow position: chr9:3730530-3730400 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 128, 37

Conread position: 21-153
Cow position: chr9:4631329-4631464 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 77, 26

Conread position: 21-153
Cow position: chr9:5886887-5887022 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 21-153
Cow position: chr9:9780428-9780563 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 21-153
Cow position: chr9:9957681-9957815 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 21-153
Cow position: chr9:15805290-15805156 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 113
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 74, 0

Conread position: 21-153
Cow position: chr9:17296595-17296729 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 21-153
Cow position: chr9:18506317-18506451 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 21-153
Cow position: chr9:22442979-22442846 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 74, 122

Conread position: 21-153
Cow position: chr9:23438202-23438071 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 33

Conread position: 21-153
Cow position: chr9:24726076-24725942 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 21-153
Cow position: chr9:24996863-24996729 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 21-153
Cow position: chr9:37193922-37194056 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 21-153
Cow position: chr9:40142848-40142979 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 77, 44

Conread position: 21-153
Cow position: chr9:44408938-44409071 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 77, 23

Conread position: 21-153
Cow position: chr9:44579713-44579847 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 21-161
Cow position: chr9:23540808-23540672 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 21-175
Cow position: chr9:22361649-22361807 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 21-186
Cow position: chr9:18110213-18110049 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 76, 136

Conread position: 22-135
Cow position: chr9:33387440-33387325 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 22-142
Cow position: chr9:13141527-13141649 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 22-147
Cow position: chr9:2857354-2857227 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 22-152
Cow position: chr9:790802-790933 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 78, 97

Conread position: 22-152
Cow position: chr9:1838462-1838329 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 22-152
Cow position: chr9:1991043-1991175 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 22-152
Cow position: chr9:2618274-2618406 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 22-152
Cow position: chr9:15215023-15214889 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 22-152
Cow position: chr9:39696932-39697064 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 113
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 76, 0

Conread position: 22-152
Cow position: chr9:43302093-43302225 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 22-152
Cow position: chr9:45756994-45757126 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 22-152
Cow position: chr9:47006244-47006112 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 22-152
Cow position: chr9:59507706-59507838 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 22-152
Cow position: chr9:61224579-61224711 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 22-152
Cow position: chr9:63654462-63654330 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 22-153
Cow position: chr9:20941988-20941855 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 22-153
Cow position: chr9:26281575-26281443 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 22-153
Cow position: chr9:26478192-26478326 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 22-153
Cow position: chr9:30803897-30803763 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 13

Conread position: 22-160
Cow position: chr9:30401785-30401647 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 124, 75

Conread position: 22-164
Cow position: chr9:41918392-41918537 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 22-172
Cow position: chr9:55322337-55322490 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 22-206
Cow position: chr9:14003487-14003301 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 23-151
Cow position: chr9:2527786-2527656 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 23-152
Cow position: chr9:2394115-2394246 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 23-152
Cow position: chr9:9611377-9611508 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 23-152
Cow position: chr9:20900480-20900349 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 23-152
Cow position: chr9:31361663-31361794 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 23-152
Cow position: chr9:35565029-35565160 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 23-152
Cow position: chr9:35624824-35624693 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 23-152
Cow position: chr9:43494558-43494427 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 23-152
Cow position: chr9:43496644-43496513 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 24-152
Cow position: chr9:5430975-5430845 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 24-152
Cow position: chr9:34690025-34690155 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 24-152
Cow position: chr9:59495675-59495804 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 74, 56

Conread position: 27-139
Cow position: chr9:30477148-30477041 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 28-138
Cow position: chr9:1855919-1856030 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 70, 41

Conread position: 28-151
Cow position: chr9:29825949-29826074 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 28-152
Cow position: chr9:635302-635429 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 28-152
Cow position: chr9:5007470-5007344 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 28-152
Cow position: chr9:28025325-28025199 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 28-152
Cow position: chr9:30281514-30281641 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 28-152
Cow position: chr9:32972871-32972745 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 28-152
Cow position: chr9:46667293-46667419 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 28-152
Cow position: chr9:61846021-61845895 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 28-152
Cow position: chr9:63586882-63587007 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 109

Conread position: 28-152
Cow position: chr9:64054944-64054817 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 28-153
Cow position: chr9:1520086-1519959 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 28-153
Cow position: chr9:23005087-23005214 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 109
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 28-207
Cow position: chr9:36622715-36622534 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 29-154
Cow position: chr9:35068-35188 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 32-153
Cow position: chr9:20317922-20317800 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 114, 68

Conread position: 32-192
Cow position: chr9:63556014-63556176 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 35-152
Cow position: chr9:49073565-49073684 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 37-151
Cow position: chr9:9752241-9752124 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 39-151
Cow position: chr9:23028535-23028649 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 41-152
Cow position: chr9:33056667-33056780 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 42-152
Cow position: chr9:34900971-34900859 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 42-152
Cow position: chr9:50840923-50840811 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 43-149
Cow position: chr9:10634405-10634297 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 46-152
Cow position: chr9:17302493-17302601 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 46-152
Cow position: chr9:28657570-28657678 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 46-153
Cow position: chr9:9817768-9817876 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 46-153
Cow position: chr9:38346671-38346780 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 95
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 62-152
Cow position: chr9:22755458-22755550 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 0

Show alignments to all cow chromosomes.