Cow genome map

Conread name: Ss1.1-Pig3-SRG8022B12.3

Conread position: 208-441
Cow position: chr14:7226540-7226775 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 149, 105

Conread position: 209-441
Cow position: chr14:37335572-37335338 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 148, 99

Conread position: 215-437
Cow position: chr14:24992990-24992770 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 151
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 144, 70

Conread position: 217-396
Cow position: chr14:39823111-39822932 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 140, 72

Conread position: 217-433
Cow position: chr14:27041238-27041024 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 71

Conread position: 217-436
Cow position: chr14:32733235-32733011 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 140, 88

Conread position: 217-436
Cow position: chr14:48490742-48490961 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 142, 88

Conread position: 217-437
Cow position: chr14:44583394-44583607 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 142, 16

Conread position: 217-438
Cow position: chr14:43387301-43387523 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 145, 91

Conread position: 217-441
Cow position: chr14:21688416-21688633 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 217-441
Cow position: chr14:27065627-27065404 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 148, 91

Conread position: 217-441
Cow position: chr14:27989346-27989115 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 29, 80

Conread position: 217-441
Cow position: chr14:33671693-33671918 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 140, 66

Conread position: 217-441
Cow position: chr14:39299892-39300117 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 140, 88

Conread position: 217-441
Cow position: chr14:39772472-39772707 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 79, 119

Conread position: 217-477
Cow position: chr14:32449106-32449374 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 219-441
Cow position: chr14:7843936-7844160 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 72

Conread position: 219-445
Cow position: chr14:13782007-13782233 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 128, 89

Conread position: 220-355
Cow position: chr14:45149524-45149658 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 223-441
Cow position: chr14:44260616-44260836 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 134, 82

Conread position: 223-441
Cow position: chr14:48361332-48361555 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 136, 82

Conread position: 223-460
Cow position: chr14:32584878-32584639 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 131, 90

Conread position: 224-416
Cow position: chr14:12740891-12740697 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 131, 81

Conread position: 224-435
Cow position: chr14:749449-749237 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 133, 51

Conread position: 224-435
Cow position: chr14:9046986-9047199 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 133, 84

Conread position: 224-435
Cow position: chr14:9450381-9450168 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 111, 84

Conread position: 224-435
Cow position: chr14:13463582-13463793 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 133, 43

Conread position: 224-435
Cow position: chr14:30713630-30713417 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 133, 89

Conread position: 224-435
Cow position: chr14:44235799-44236012 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 133, 81

Conread position: 224-436
Cow position: chr14:43560382-43560598 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 86

Conread position: 224-437
Cow position: chr14:35383494-35383287 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 133, 60

Conread position: 224-437
Cow position: chr14:37135961-37136175 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 136, 84

Conread position: 224-437
Cow position: chr14:44553976-44554190 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 133, 81

Conread position: 224-438
Cow position: chr14:1660605-1660820 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 133, 52

Conread position: 224-438
Cow position: chr14:2288409-2288625 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 133, 84

Conread position: 224-438
Cow position: chr14:12482588-12482798 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 88, 46

Conread position: 224-438
Cow position: chr14:44773684-44773459 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 46, 93

Conread position: 224-441
Cow position: chr14:16997886-16997672 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 122, 84

Conread position: 224-441
Cow position: chr14:19326107-19325890 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 131, 81

Conread position: 224-441
Cow position: chr14:19549348-19549566 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 133, 52

Conread position: 224-441
Cow position: chr14:34668636-34668417 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 132, 84

Conread position: 224-441
Cow position: chr14:40344687-40344904 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 133, 84

Conread position: 224-441
Cow position: chr14:46222234-46222453 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 140, 89

Conread position: 224-441
Cow position: chr14:46302052-46302273 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 137, 84

Conread position: 224-441
Cow position: chr14:50113518-50113737 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 132, 84

Conread position: 224-460
Cow position: chr14:5531488-5531726 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 132, 84

Conread position: 224-460
Cow position: chr14:8899436-8899673 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 50

Conread position: 224-460
Cow position: chr14:11151764-11151525 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 118, 60

Conread position: 224-460
Cow position: chr14:13580982-13581218 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 53, 43

Conread position: 224-460
Cow position: chr14:17689276-17689515 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 123, 81

Conread position: 224-460
Cow position: chr14:23255190-23254952 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 136, 84

Conread position: 224-460
Cow position: chr14:38460302-38460064 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 133, 84

Conread position: 224-477
Cow position: chr14:11475142-11474892 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 61

Conread position: 225-441
Cow position: chr14:45026803-45026585 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 134, 88

Conread position: 226-435
Cow position: chr14:49218483-49218694 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 133, 82

Conread position: 226-437
Cow position: chr14:34999309-34999516 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 130, 49

Conread position: 226-441
Cow position: chr14:11636715-11636928 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 131, 49

Conread position: 226-441
Cow position: chr14:26868156-26867937 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 131, 82

Conread position: 226-441
Cow position: chr14:29583152-29583365 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 130, 82

Conread position: 226-460
Cow position: chr14:16917574-16917340 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 129, 79

Conread position: 232-429
Cow position: chr14:20705651-20705849 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 125, 73

Conread position: 232-460
Cow position: chr14:11835793-11836023 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 38, 25

Conread position: 233-441
Cow position: chr14:22104396-22104190 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 124, 38

Conread position: 233-460
Cow position: chr14:37226330-37226559 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 123, 75

Conread position: 233-472
Cow position: chr14:23528833-23528594 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 115, 67

Conread position: 234-441
Cow position: chr14:12945606-12945394 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 76

Conread position: 243-441
Cow position: chr14:7988140-7988340 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 136
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 114, 70

Conread position: 306-403
Cow position: chr14:9512680-9512584 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 317-441
Cow position: chr14:42149765-42149890 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 98

Conread position: 320-438
Cow position: chr14:38915835-38915714 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 321-435
Cow position: chr14:13320423-13320306 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 36, 0

Conread position: 568-696
Cow position: chr14:21533948-21534086 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 67

Show alignments to all cow chromosomes.