Cow genome map

Conread name: Ss1.1-Pig3-SRG8022B12.3

Conread position: 198-438
Cow position: chr16:7199994-7199751 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 108

Conread position: 208-438
Cow position: chr16:25173070-25173293 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 149, 64

Conread position: 209-441
Cow position: chr16:49386803-49387036 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 35

Conread position: 215-460
Cow position: chr16:15980590-15980343 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 141, 93

Conread position: 216-435
Cow position: chr16:4847102-4846885 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 141, 68

Conread position: 216-441
Cow position: chr16:8872634-8872406 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 37

Conread position: 217-405
Cow position: chr16:818798-818986 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 53, 59

Conread position: 217-418
Cow position: chr16:46224756-46224554 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 142, 91

Conread position: 217-434
Cow position: chr16:24811761-24811975 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 106, 59

Conread position: 217-435
Cow position: chr16:29035695-29035911 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 140, 88

Conread position: 217-438
Cow position: chr16:16268096-16267875 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 60

Conread position: 217-438
Cow position: chr16:18495947-18495730 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 217-438
Cow position: chr16:50875015-50874796 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 140, 83

Conread position: 217-441
Cow position: chr16:5633511-5633292 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 54

Conread position: 217-441
Cow position: chr16:20635716-20635495 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 140, 84

Conread position: 217-441
Cow position: chr16:25934951-25935177 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 114, 38

Conread position: 217-441
Cow position: chr16:26991151-26990924 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 48, 92

Conread position: 217-441
Cow position: chr16:42804553-42804773 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 166, 88

Conread position: 217-441
Cow position: chr16:48909836-48909615 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 140, 39

Conread position: 217-441
Cow position: chr16:51419011-51418788 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 54

Conread position: 217-460
Cow position: chr16:2303926-2304170 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 139, 88

Conread position: 217-460
Cow position: chr16:25455664-25455420 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 138, 88

Conread position: 217-460
Cow position: chr16:40294373-40294128 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 139, 91

Conread position: 217-460
Cow position: chr16:52589908-52589670 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 142, 9

Conread position: 220-462
Cow position: chr16:51040350-51040598 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 98

Conread position: 221-441
Cow position: chr16:41684491-41684269 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 136, 0

Conread position: 223-438
Cow position: chr16:51402046-51401830 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 136, 82

Conread position: 223-441
Cow position: chr16:11285025-11285241 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 134, 48

Conread position: 223-460
Cow position: chr16:5487574-5487814 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 132, 82

Conread position: 223-460
Cow position: chr16:31586893-31586655 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 162
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 136, 85

Conread position: 224-419
Cow position: chr16:18617332-18617136 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 133, 71

Conread position: 224-420
Cow position: chr16:25167897-25168091 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 113, 61

Conread position: 224-421
Cow position: chr16:39615056-39615252 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 97, 13

Conread position: 224-433
Cow position: chr16:12161474-12161264 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 75, 85

Conread position: 224-434
Cow position: chr16:21189039-21189251 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 133, 84

Conread position: 224-435
Cow position: chr16:15811873-15812086 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 53

Conread position: 224-435
Cow position: chr16:28168513-28168300 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 133, 89

Conread position: 224-436
Cow position: chr16:26652424-26652638 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 135, 89

Conread position: 224-437
Cow position: chr16:28023219-28023007 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 133, 81

Conread position: 224-437
Cow position: chr16:46521245-46521029 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 132, 81

Conread position: 224-438
Cow position: chr16:10440048-10440261 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 137, 37

Conread position: 224-438
Cow position: chr16:15411243-15411032 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 133, 47

Conread position: 224-441
Cow position: chr16:839088-839307 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 121, 84

Conread position: 224-441
Cow position: chr16:2409089-2408871 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 23

Conread position: 224-441
Cow position: chr16:2481311-2481094 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 132, 83

Conread position: 224-441
Cow position: chr16:3010644-3010859 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 133, 47

Conread position: 224-441
Cow position: chr16:4388541-4388761 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 35, 41

Conread position: 224-441
Cow position: chr16:5528994-5529213 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 133, 89

Conread position: 224-441
Cow position: chr16:11744345-11744564 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 133, 84

Conread position: 224-441
Cow position: chr16:20277658-20277877 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 133, 89

Conread position: 224-441
Cow position: chr16:22799865-22799646 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 118, 84

Conread position: 224-441
Cow position: chr16:23876719-23876506 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 133, 46

Conread position: 224-441
Cow position: chr16:24621893-24621674 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 133, 84

Conread position: 224-441
Cow position: chr16:25443681-25443900 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 61, 46

Conread position: 224-441
Cow position: chr16:26092089-26091870 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 133, 89

Conread position: 224-441
Cow position: chr16:28194495-28194276 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 133, 84

Conread position: 224-441
Cow position: chr16:29157462-29157675 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 132, 81

Conread position: 224-441
Cow position: chr16:37443713-37443496 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 98, 31

Conread position: 224-441
Cow position: chr16:41161659-41161446 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 133, 47

Conread position: 224-441
Cow position: chr16:41164954-41164742 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 131, 37

Conread position: 224-441
Cow position: chr16:42734819-42734609 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 133, 51

Conread position: 224-441
Cow position: chr16:47403188-47403407 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 133, 84

Conread position: 224-441
Cow position: chr16:56861114-56861333 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 133, 89

Conread position: 224-458
Cow position: chr16:3770206-3769973 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 61

Conread position: 224-460
Cow position: chr16:416705-416937 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 132, 31

Conread position: 224-460
Cow position: chr16:1565868-1565634 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 131, 47

Conread position: 224-460
Cow position: chr16:2725415-2725180 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 131, 81

Conread position: 224-460
Cow position: chr16:3144590-3144356 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 134, 47

Conread position: 224-460
Cow position: chr16:3149222-3148988 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 135, 47

Conread position: 224-460
Cow position: chr16:3331715-3331952 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 46, 53

Conread position: 224-460
Cow position: chr16:7466418-7466656 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 132, 89

Conread position: 224-460
Cow position: chr16:8814299-8814058 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 88, 0

Conread position: 224-460
Cow position: chr16:15186874-15187109 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 131, 46

Conread position: 224-460
Cow position: chr16:15494265-15494502 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 157
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 132, 13

Conread position: 224-460
Cow position: chr16:15569577-15569812 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 135, 25

Conread position: 224-460
Cow position: chr16:20968994-20968757 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 131, 81

Conread position: 224-460
Cow position: chr16:23985115-23985353 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 132, 89

Conread position: 224-460
Cow position: chr16:25343781-25344018 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 61

Conread position: 224-460
Cow position: chr16:26665521-26665758 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 132, 84

Conread position: 224-460
Cow position: chr16:27731577-27731339 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 132, 84

Conread position: 224-460
Cow position: chr16:43895458-43895220 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 132, 84

Conread position: 224-460
Cow position: chr16:54323515-54323277 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 132, 84

Conread position: 224-539
Cow position: chr16:12536140-12535818 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 37

Conread position: 224-541
Cow position: chr16:7674654-7674336 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 214
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 132, 81

Conread position: 224-593
Cow position: chr16:52526036-52526406 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 233
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 132, 84

Conread position: 225-379
Cow position: chr16:31424649-31424810 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 225-473
Cow position: chr16:4425899-4426145 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 130, 83

Conread position: 225-497
Cow position: chr16:32325661-32325928 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 134, 80

Conread position: 226-435
Cow position: chr16:47772074-47772280 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 135, 81

Conread position: 226-437
Cow position: chr16:10770672-10770877 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 34

Conread position: 226-441
Cow position: chr16:6945063-6945281 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 131, 82

Conread position: 226-441
Cow position: chr16:25262434-25262647 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 24

Conread position: 227-434
Cow position: chr16:41573215-41573428 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 81, 60

Conread position: 233-438
Cow position: chr16:23250174-23249969 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 128, 75

Conread position: 233-441
Cow position: chr16:20642321-20642526 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 124, 72

Conread position: 234-495
Cow position: chr16:48103906-48104164 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 123, 74

Conread position: 235-433
Cow position: chr16:23800820-23800618 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 75

Conread position: 241-441
Cow position: chr16:56840082-56840284 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 118, 67

Conread position: 242-438
Cow position: chr16:17141224-17141427 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 109

Conread position: 261-438
Cow position: chr16:4525382-4525208 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 5

Conread position: 289-437
Cow position: chr16:49254364-49254214 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 19

Conread position: 308-441
Cow position: chr16:42254928-42255064 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 317-441
Cow position: chr16:23789992-23790115 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 66

Conread position: 343-441
Cow position: chr16:42117687-42117786 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 17, 0

Show alignments to all cow chromosomes.