Cow genome map

Conread name: Ss1.1-Pig3-SRG8022B12.3

Conread position: 208-441
Cow position: chr20:30776282-30776510 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 93

Conread position: 216-438
Cow position: chr20:39882405-39882618 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 55

Conread position: 216-441
Cow position: chr20:37956268-37956051 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 123, 67

Conread position: 217-387
Cow position: chr20:17659196-17659025 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 44

Conread position: 217-411
Cow position: chr20:7513890-7514096 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 217-414
Cow position: chr20:24518492-24518682 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 139, 49

Conread position: 217-415
Cow position: chr20:13794676-13794876 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 140, 91

Conread position: 217-436
Cow position: chr20:12047064-12047283 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 146, 88

Conread position: 217-436
Cow position: chr20:14757706-14757486 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 91

Conread position: 217-436
Cow position: chr20:30578441-30578658 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 140, 54

Conread position: 217-437
Cow position: chr20:19365768-19365551 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 140, 85

Conread position: 217-437
Cow position: chr20:35844763-35844543 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 140, 70

Conread position: 217-438
Cow position: chr20:7569546-7569326 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 139, 72

Conread position: 217-438
Cow position: chr20:7594035-7593814 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 139, 78

Conread position: 217-438
Cow position: chr20:10037258-10037034 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 61, 93

Conread position: 217-441
Cow position: chr20:5076551-5076774 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 62, 91

Conread position: 217-441
Cow position: chr20:10493758-10493982 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 138, 58

Conread position: 217-441
Cow position: chr20:13654740-13654517 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 139, 59

Conread position: 217-441
Cow position: chr20:19440464-19440690 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 140, 91

Conread position: 217-460
Cow position: chr20:13507009-13506764 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 140, 86

Conread position: 219-433
Cow position: chr20:12568761-12568544 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 9, 90

Conread position: 220-438
Cow position: chr20:33182132-33181914 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 141, 88

Conread position: 222-420
Cow position: chr20:6259735-6259542 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 135, 22

Conread position: 224-421
Cow position: chr20:28959005-28958804 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 89

Conread position: 224-426
Cow position: chr20:23801448-23801649 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 121, 84

Conread position: 224-433
Cow position: chr20:12435840-12435629 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 131, 81

Conread position: 224-435
Cow position: chr20:3809213-3809000 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 133, 84

Conread position: 224-435
Cow position: chr20:24541982-24542195 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 133, 84

Conread position: 224-437
Cow position: chr20:21719122-21719338 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 87

Conread position: 224-438
Cow position: chr20:15294524-15294740 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 132, 84

Conread position: 224-438
Cow position: chr20:28444791-28444576 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 133, 84

Conread position: 224-438
Cow position: chr20:31079944-31080144 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 82

Conread position: 224-441
Cow position: chr20:752704-752923 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 139, 84

Conread position: 224-441
Cow position: chr20:825336-825555 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 133, 84

Conread position: 224-441
Cow position: chr20:5537485-5537704 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 131, 84

Conread position: 224-441
Cow position: chr20:8200773-8200992 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 133, 89

Conread position: 224-441
Cow position: chr20:8971335-8971116 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 133, 84

Conread position: 224-441
Cow position: chr20:12332250-12332460 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 108, 63

Conread position: 224-441
Cow position: chr20:13765454-13765672 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 17

Conread position: 224-441
Cow position: chr20:13954211-13954424 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 62

Conread position: 224-441
Cow position: chr20:16559985-16559766 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 133, 89

Conread position: 224-441
Cow position: chr20:18355787-18356006 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 133, 89

Conread position: 224-441
Cow position: chr20:19844347-19844560 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 135, 46

Conread position: 224-441
Cow position: chr20:24568713-24568494 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 133, 84

Conread position: 224-441
Cow position: chr20:25846064-25845849 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 131, 81

Conread position: 224-441
Cow position: chr20:28163601-28163820 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 132, 84

Conread position: 224-441
Cow position: chr20:35108631-35108412 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 133, 84

Conread position: 224-452
Cow position: chr20:38956694-38956926 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 133, 89

Conread position: 224-460
Cow position: chr20:10922362-10922127 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 137, 84

Conread position: 224-460
Cow position: chr20:21397083-21397315 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 130, 47

Conread position: 224-460
Cow position: chr20:23805321-23805083 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 132, 84

Conread position: 224-460
Cow position: chr20:30688130-30688367 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 46, 18

Conread position: 224-460
Cow position: chr20:35127227-35127465 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 61

Conread position: 224-460
Cow position: chr20:39233787-39234025 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 119, 84

Conread position: 224-465
Cow position: chr20:7811272-7811034 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 135, 47

Conread position: 224-465
Cow position: chr20:20440395-20440151 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 133, 84

Conread position: 225-441
Cow position: chr20:5793435-5793652 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 132, 80

Conread position: 225-460
Cow position: chr20:7598300-7598063 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 77

Conread position: 226-425
Cow position: chr20:2180193-2179994 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 40, 31

Conread position: 226-438
Cow position: chr20:22696486-22696281 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 44, 30

Conread position: 226-441
Cow position: chr20:27876041-27876257 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 29

Conread position: 226-460
Cow position: chr20:6136431-6136195 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 131, 82

Conread position: 226-539
Cow position: chr20:28724312-28724629 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 210
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 62

Conread position: 233-435
Cow position: chr20:14926077-14925873 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 124, 75

Conread position: 233-461
Cow position: chr20:11411466-11411240 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 238-441
Cow position: chr20:31376166-31375961 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 80

Conread position: 238-460
Cow position: chr20:14867808-14867589 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 123, 25

Conread position: 244-441
Cow position: chr20:42085109-42085308 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 113, 64

Conread position: 245-460
Cow position: chr20:28561307-28561090 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 111, 63

Conread position: 294-437
Cow position: chr20:32085827-32085683 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 30

Conread position: 317-441
Cow position: chr20:14511367-14511494 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.