Cow genome map

Conread name: Ss1.1-Pig3-SRG8022B12.3

Conread position: 205-442
Cow position: chr22:2391064-2390816 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 215-429
Cow position: chr22:34596220-34596435 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 34, 29

Conread position: 217-390
Cow position: chr22:44936431-44936606 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 138, 88

Conread position: 217-425
Cow position: chr22:36596050-36595848 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 100, 66

Conread position: 217-433
Cow position: chr22:21591913-21592131 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 138, 88

Conread position: 217-435
Cow position: chr22:30067979-30067763 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 140, 87

Conread position: 217-436
Cow position: chr22:41242916-41243136 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 108, 35

Conread position: 217-437
Cow position: chr22:5931598-5931374 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 140, 88

Conread position: 217-437
Cow position: chr22:40588894-40589115 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 142, 25

Conread position: 217-438
Cow position: chr22:8338911-8339133 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 139, 91

Conread position: 217-438
Cow position: chr22:26337815-26338025 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 140, 41

Conread position: 217-441
Cow position: chr22:11635931-11635709 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 14, 22

Conread position: 217-441
Cow position: chr22:36356558-36356783 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 92

Conread position: 217-460
Cow position: chr22:3434476-3434232 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 139, 90

Conread position: 217-460
Cow position: chr22:18604319-18604074 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 139, 91

Conread position: 217-460
Cow position: chr22:26105655-26105406 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 138, 88

Conread position: 218-429
Cow position: chr22:41473195-41472988 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 138, 52

Conread position: 219-436
Cow position: chr22:5935654-5935444 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 138, 56

Conread position: 219-438
Cow position: chr22:13722252-13722030 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 137, 86

Conread position: 220-458
Cow position: chr22:22029711-22029949 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 50, 67

Conread position: 222-441
Cow position: chr22:8647286-8647065 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 99, 20

Conread position: 223-438
Cow position: chr22:15853931-15854148 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 133, 77

Conread position: 223-441
Cow position: chr22:1482908-1483127 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 135, 85

Conread position: 223-441
Cow position: chr22:23867516-23867304 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 133, 47

Conread position: 224-391
Cow position: chr22:6334306-6334475 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 131, 81

Conread position: 224-399
Cow position: chr22:32205555-32205732 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 61

Conread position: 224-432
Cow position: chr22:17325986-17325778 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 46, 61

Conread position: 224-433
Cow position: chr22:11609139-11609347 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 132, 65

Conread position: 224-433
Cow position: chr22:28998036-28997825 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 133, 84

Conread position: 224-434
Cow position: chr22:13775000-13775210 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 136, 84

Conread position: 224-435
Cow position: chr22:10601366-10601579 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 133, 81

Conread position: 224-435
Cow position: chr22:18029770-18029981 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 133, 84

Conread position: 224-435
Cow position: chr22:30172834-30173041 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 138, 33

Conread position: 224-435
Cow position: chr22:44100846-44100633 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 139, 84

Conread position: 224-436
Cow position: chr22:8735223-8735005 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 124, 84

Conread position: 224-438
Cow position: chr22:20238339-20238123 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 133, 84

Conread position: 224-441
Cow position: chr22:539627-539847 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 224-441
Cow position: chr22:696423-696642 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 132, 84

Conread position: 224-441
Cow position: chr22:1324622-1324848 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 133, 84

Conread position: 224-441
Cow position: chr22:7101283-7101065 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 46, 67

Conread position: 224-441
Cow position: chr22:8487380-8487161 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 133, 89

Conread position: 224-441
Cow position: chr22:10577991-10577776 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 133, 47

Conread position: 224-441
Cow position: chr22:15055090-15055306 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 128, 83

Conread position: 224-441
Cow position: chr22:18196771-18196990 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 133, 89

Conread position: 224-441
Cow position: chr22:21193706-21193490 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 139, 46

Conread position: 224-441
Cow position: chr22:24818260-24818052 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 132, 42

Conread position: 224-441
Cow position: chr22:29854350-29854569 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 133, 84

Conread position: 224-441
Cow position: chr22:34170837-34171055 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 53

Conread position: 224-441
Cow position: chr22:45280442-45280661 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 133, 84

Conread position: 224-441
Cow position: chr22:48272511-48272291 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 53

Conread position: 224-452
Cow position: chr22:980784-981016 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 133, 84

Conread position: 224-452
Cow position: chr22:17812132-17811900 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 133, 84

Conread position: 224-460
Cow position: chr22:558208-557970 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 135, 84

Conread position: 224-460
Cow position: chr22:10933730-10933495 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 81

Conread position: 224-460
Cow position: chr22:15309462-15309232 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 134, 46

Conread position: 224-460
Cow position: chr22:19141194-19140956 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 123, 84

Conread position: 224-460
Cow position: chr22:28784614-28784852 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 61

Conread position: 224-460
Cow position: chr22:30676231-30675996 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 139, 47

Conread position: 224-460
Cow position: chr22:31315037-31315275 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 132, 84

Conread position: 224-460
Cow position: chr22:31332378-31332140 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 132, 84

Conread position: 224-460
Cow position: chr22:41847055-41846817 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 135, 84

Conread position: 224-460
Cow position: chr22:42993671-42993905 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 132, 84

Conread position: 224-472
Cow position: chr22:19601305-19601060 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 131, 81

Conread position: 224-487
Cow position: chr22:1518533-1518269 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 62

Conread position: 224-488
Cow position: chr22:12729155-12728890 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 137, 51

Conread position: 224-590
Cow position: chr22:33952457-33952090 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 238
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 61

Conread position: 226-436
Cow position: chr22:532594-532800 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 226-441
Cow position: chr22:17994814-17994597 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 131, 87

Conread position: 226-441
Cow position: chr22:27307469-27307252 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 44, 51

Conread position: 229-435
Cow position: chr22:22934273-22934481 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 128, 76

Conread position: 232-438
Cow position: chr22:38962783-38962988 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 127, 51

Conread position: 232-441
Cow position: chr22:34822638-34822428 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 6

Conread position: 233-436
Cow position: chr22:15355196-15355402 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 125, 75

Conread position: 233-441
Cow position: chr22:32337825-32338035 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 124, 80

Conread position: 234-441
Cow position: chr22:13767831-13768034 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 122, 74

Conread position: 237-435
Cow position: chr22:10549238-10549438 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 120, 71

Conread position: 237-441
Cow position: chr22:43235343-43235549 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 120, 71

Conread position: 237-461
Cow position: chr22:29956687-29956468 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 120, 38

Conread position: 241-422
Cow position: chr22:289132-288953 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 17

Conread position: 244-462
Cow position: chr22:11780459-11780240 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 10, 52

Conread position: 249-438
Cow position: chr22:3271580-3271397 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 108, 51

Conread position: 255-429
Cow position: chr22:2039845-2040021 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 58

Conread position: 258-441
Cow position: chr22:21364994-21364815 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 111

Conread position: 274-461
Cow position: chr22:46032775-46032962 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 83, 33

Conread position: 295-437
Cow position: chr22:36544186-36544050 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 307-441
Cow position: chr22:10015525-10015662 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 309-460
Cow position: chr22:29396682-29396836 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 317-441
Cow position: chr22:36572938-36572811 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 323-441
Cow position: chr22:36556539-36556420 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.