Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8022B12.3 |
| Conread position: | 205-391 |
| Cow position: | chr25:16448180-16447999 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 5, 31 |
| Conread position: | 205-434 |
| Cow position: | chr25:34667473-34667246 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 156, 84 |
| Conread position: | 216-451 |
| Cow position: | chr25:34675571-34675805 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 227, 92 |
| Conread position: | 217-432 |
| Cow position: | chr25:18422994-18423205 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 140, 23 |
| Conread position: | 217-432 |
| Cow position: | chr25:32898439-32898648 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 143, 54 |
| Conread position: | 217-435 |
| Cow position: | chr25:31513269-31513483 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 128, 58 |
| Conread position: | 217-437 |
| Cow position: | chr25:11930269-11930051 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 140, 36 |
| Conread position: | 217-441 |
| Cow position: | chr25:14962663-14962443 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 140, 73 |
| Conread position: | 217-445 |
| Cow position: | chr25:19017118-19016896 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 223-461 |
| Cow position: | chr25:26281299-26281539 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 133, 85 |
| Conread position: | 224-419 |
| Cow position: | chr25:12835289-12835093 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 135, 84 |
| Conread position: | 224-433 |
| Cow position: | chr25:34344424-34344217 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 224-435 |
| Cow position: | chr25:18191111-18190898 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 84 |
| Conread position: | 224-435 |
| Cow position: | chr25:20773054-20772841 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-437 |
| Cow position: | chr25:17586741-17586528 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-437 |
| Cow position: | chr25:26355438-26355651 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 224-441 |
| Cow position: | chr25:450483-450270 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 77, 40 |
| Conread position: | 224-441 |
| Cow position: | chr25:9394702-9394922 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 40, 55 |
| Conread position: | 224-441 |
| Cow position: | chr25:14537384-14537165 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 133, 89 |
| Conread position: | 224-441 |
| Cow position: | chr25:18209420-18209201 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-441 |
| Cow position: | chr25:19338037-19337822 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 133, 30 |
| Conread position: | 224-441 |
| Cow position: | chr25:35648702-35648483 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 133, 89 |
| Conread position: | 224-454 |
| Cow position: | chr25:11664950-11665181 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 131, 90 |
| Conread position: | 224-460 |
| Cow position: | chr25:13959346-13959585 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 86 |
| Conread position: | 224-460 |
| Cow position: | chr25:18887191-18886953 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 135, 84 |
| Conread position: | 224-460 |
| Cow position: | chr25:22150354-22150590 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 132, 41 |
| Conread position: | 224-460 |
| Cow position: | chr25:28862147-28862385 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 132, 84 |
| Conread position: | 224-499 |
| Cow position: | chr25:26900814-26901086 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 136, 84 |
| Conread position: | 224-539 |
| Cow position: | chr25:39386917-39387228 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 131, 81 |
| Conread position: | 225-441 |
| Cow position: | chr25:35568604-35568386 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 131, 83 |
| Conread position: | 226-433 |
| Cow position: | chr25:35755963-35755756 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 115, 79 |
| Conread position: | 226-437 |
| Cow position: | chr25:19106764-19106975 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 73 |
| Conread position: | 226-441 |
| Cow position: | chr25:19923096-19923312 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 131, 74 |
| Conread position: | 226-441 |
| Cow position: | chr25:32578379-32578162 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 131, 82 |
| Conread position: | 233-435 |
| Cow position: | chr25:35552977-35553181 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 124, 75 |
| Conread position: | 234-441 |
| Cow position: | chr25:37647721-37647935 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 47, 75 |
| Conread position: | 238-453 |
| Cow position: | chr25:18280276-18280063 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 122, 74 |
| Conread position: | 260-441 |
| Cow position: | chr25:24449917-24449736 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 295-441 |
| Cow position: | chr25:36814362-36814215 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 68, 21 |
| Conread position: | 564-696 |
| Cow position: | chr25:449856-449719 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.