Cow genome map

Conread name: Ss1.1-Pig3-SRG8022B12.3

Conread position: 205-410
Cow position: chr4:18313024-18312816 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 104

Conread position: 216-435
Cow position: chr4:60044828-60044613 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 140, 59

Conread position: 217-406
Cow position: chr4:20605868-20606057 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 139, 19

Conread position: 217-409
Cow position: chr4:19253979-19254178 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 0

Conread position: 217-415
Cow position: chr4:11612617-11612422 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 99, 70

Conread position: 217-436
Cow position: chr4:65599428-65599230 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 217-437
Cow position: chr4:37702494-37702709 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 114, 27

Conread position: 217-437
Cow position: chr4:44900496-44900712 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 66

Conread position: 217-441
Cow position: chr4:5048303-5048088 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 66, 0

Conread position: 217-441
Cow position: chr4:12454273-12454497 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 140, 38

Conread position: 217-441
Cow position: chr4:13253984-13254195 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 140, 38

Conread position: 217-441
Cow position: chr4:18100692-18100468 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 63, 95

Conread position: 217-441
Cow position: chr4:27372786-27372560 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 93

Conread position: 217-441
Cow position: chr4:51606557-51606331 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 144, 91

Conread position: 224-387
Cow position: chr4:68175643-68175820 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 20

Conread position: 224-405
Cow position: chr4:12238991-12238809 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 131, 81

Conread position: 224-426
Cow position: chr4:3128045-3128249 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 140, 84

Conread position: 224-431
Cow position: chr4:13498419-13498628 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 131, 81

Conread position: 224-432
Cow position: chr4:16362429-16362638 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 37

Conread position: 224-432
Cow position: chr4:17539780-17539570 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 46, 61

Conread position: 224-435
Cow position: chr4:161391-161599 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 46, 60

Conread position: 224-435
Cow position: chr4:4418273-4418486 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 140, 84

Conread position: 224-436
Cow position: chr4:57986243-57986457 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 131, 81

Conread position: 224-438
Cow position: chr4:17834631-17834415 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 135, 84

Conread position: 224-438
Cow position: chr4:18815376-18815160 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 46, 61

Conread position: 224-438
Cow position: chr4:47056203-47055987 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 111, 84

Conread position: 224-439
Cow position: chr4:41473618-41473401 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 133, 89

Conread position: 224-441
Cow position: chr4:1240191-1239976 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 77, 46

Conread position: 224-441
Cow position: chr4:2350493-2350274 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 131, 81

Conread position: 224-441
Cow position: chr4:3449019-3449238 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 131, 77

Conread position: 224-441
Cow position: chr4:5611769-5611556 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 224-441
Cow position: chr4:6266989-6266771 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 84

Conread position: 224-441
Cow position: chr4:8378153-8378375 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 74, 52

Conread position: 224-441
Cow position: chr4:12606655-12606440 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 133, 43

Conread position: 224-441
Cow position: chr4:13464035-13464255 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 19, 85

Conread position: 224-441
Cow position: chr4:23305116-23304897 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 53

Conread position: 224-441
Cow position: chr4:25224959-25224744 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 135, 59

Conread position: 224-441
Cow position: chr4:27336161-27336388 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 224-441
Cow position: chr4:30473657-30473876 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 133, 84

Conread position: 224-441
Cow position: chr4:30577950-30578169 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 135, 89

Conread position: 224-441
Cow position: chr4:48029085-48029304 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 131, 81

Conread position: 224-441
Cow position: chr4:48798743-48798960 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 132, 81

Conread position: 224-441
Cow position: chr4:50976818-50977026 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 136, 46

Conread position: 224-441
Cow position: chr4:54811637-54811419 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 17

Conread position: 224-441
Cow position: chr4:57959517-57959735 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 165

Conread position: 224-441
Cow position: chr4:58622302-58622083 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 133, 89

Conread position: 224-441
Cow position: chr4:58812710-58812929 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 121, 89

Conread position: 224-441
Cow position: chr4:61241509-61241724 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 132, 47

Conread position: 224-441
Cow position: chr4:62558341-62558126 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 135, 47

Conread position: 224-452
Cow position: chr4:29605250-29605019 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 133, 78

Conread position: 224-456
Cow position: chr4:55272362-55272596 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 135, 81

Conread position: 224-460
Cow position: chr4:358107-358345 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 132, 84

Conread position: 224-460
Cow position: chr4:1048028-1047790 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 132, 84

Conread position: 224-460
Cow position: chr4:3069156-3069383 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 136, 47

Conread position: 224-460
Cow position: chr4:3355738-3355499 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 82

Conread position: 224-460
Cow position: chr4:4378617-4378853 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 137, 84

Conread position: 224-460
Cow position: chr4:6488144-6487908 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 132, 25

Conread position: 224-460
Cow position: chr4:34711736-34711974 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 132, 84

Conread position: 224-460
Cow position: chr4:43317424-43317188 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 137, 84

Conread position: 224-460
Cow position: chr4:67382510-67382748 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 132, 84

Conread position: 224-461
Cow position: chr4:33495784-33496023 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 84, 46

Conread position: 224-465
Cow position: chr4:1928399-1928155 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 133, 84

Conread position: 224-472
Cow position: chr4:16640835-16641083 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 132, 84

Conread position: 224-477
Cow position: chr4:25597262-25597007 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 132, 60

Conread position: 224-512
Cow position: chr4:27288845-27288553 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 192
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 118, 81

Conread position: 224-539
Cow position: chr4:33070615-33070302 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 219
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 123, 46

Conread position: 224-539
Cow position: chr4:46712372-46712057 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 118, 37

Conread position: 225-420
Cow position: chr4:47263121-47262924 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 132, 83

Conread position: 225-441
Cow position: chr4:43883340-43883556 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 130, 80

Conread position: 226-438
Cow position: chr4:33861-33647 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 131, 82

Conread position: 226-438
Cow position: chr4:2091004-2091205 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 130, 11

Conread position: 226-438
Cow position: chr4:62222425-62222635 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 145, 35

Conread position: 226-441
Cow position: chr4:4184415-4184628 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 175
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 66

Conread position: 226-441
Cow position: chr4:33021401-33021190 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 226-441
Cow position: chr4:45269185-45268969 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 131, 15

Conread position: 226-441
Cow position: chr4:56014389-56014172 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 87

Conread position: 226-460
Cow position: chr4:1369770-1369537 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 131, 37

Conread position: 226-460
Cow position: chr4:6864002-6863770 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 138, 45

Conread position: 226-473
Cow position: chr4:38931596-38931836 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 131, 50

Conread position: 227-441
Cow position: chr4:44778967-44778751 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 130, 81

Conread position: 228-459
Cow position: chr4:26546770-26546995 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 129, 28

Conread position: 232-426
Cow position: chr4:10095126-10095321 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 123, 73

Conread position: 232-441
Cow position: chr4:60626286-60626077 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 43

Conread position: 238-420
Cow position: chr4:68942354-68942172 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 118, 47

Conread position: 238-460
Cow position: chr4:21973422-21973203 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 122, 70

Conread position: 242-438
Cow position: chr4:21361769-21361963 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 117, 29

Conread position: 244-441
Cow position: chr4:44727828-44728024 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 113, 69

Conread position: 246-441
Cow position: chr4:49744022-49744217 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 62

Conread position: 261-441
Cow position: chr4:5574352-5574531 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 88, 47

Conread position: 308-453
Cow position: chr4:49825016-49825164 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 317-461
Cow position: chr4:64038551-64038698 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 325-437
Cow position: chr4:65917769-65917884 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 327-438
Cow position: chr4:16606473-16606587 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 333-441
Cow position: chr4:1028892-1028782 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 14

Show alignments to all cow chromosomes.