Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8022B12.3 |
| Conread position: | 200-437 |
| Cow position: | chrX:31979556-31979319 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 157, 11 |
| Conread position: | 203-460 |
| Cow position: | chrX:27591745-27591483 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 17, 77 |
| Conread position: | 205-437 |
| Cow position: | chrX:387418-387653 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 5, 104 |
| Conread position: | 215-438 |
| Cow position: | chrX:9067263-9067484 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 145, 93 |
| Conread position: | 216-438 |
| Cow position: | chrX:18246405-18246618 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 217-394 |
| Cow position: | chrX:36839014-36839194 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 217-420 |
| Cow position: | chrX:25406450-25406248 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 134, 66 |
| Conread position: | 217-428 |
| Cow position: | chrX:20133857-20133648 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 139, 58 |
| Conread position: | 217-428 |
| Cow position: | chrX:21000504-21000718 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 95, 74 |
| Conread position: | 217-429 |
| Cow position: | chrX:28556675-28556887 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 141, 72 |
| Conread position: | 217-433 |
| Cow position: | chrX:21267774-21267559 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 140, 78 |
| Conread position: | 217-435 |
| Cow position: | chrX:22331480-22331258 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 60 |
| Conread position: | 217-437 |
| Cow position: | chrX:10754863-10755085 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 217-437 |
| Cow position: | chrX:47394661-47394427 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 217-441 |
| Cow position: | chrX:11743584-11743808 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 140, 55 |
| Conread position: | 217-441 |
| Cow position: | chrX:19474855-19474630 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 146, 38 |
| Conread position: | 217-441 |
| Cow position: | chrX:19607969-19608195 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 147, 91 |
| Conread position: | 217-441 |
| Cow position: | chrX:22126481-22126255 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 140, 88 |
| Conread position: | 217-441 |
| Cow position: | chrX:30425534-30425760 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 53, 59 |
| Conread position: | 217-441 |
| Cow position: | chrX:33536881-33537117 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 61, 106 |
| Conread position: | 217-441 |
| Cow position: | chrX:35938727-35938518 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 217-441 |
| Cow position: | chrX:39564990-39564773 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 143, 66 |
| Conread position: | 217-441 |
| Cow position: | chrX:41528512-41528294 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 142, 88 |
| Conread position: | 217-441 |
| Cow position: | chrX:42008923-42009149 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 140, 88 |
| Conread position: | 217-460 |
| Cow position: | chrX:26623516-26623265 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 97 |
| Conread position: | 217-654 |
| Cow position: | chrX:12652198-12651761 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 140, 91 |
| Conread position: | 219-446 |
| Cow position: | chrX:302398-302626 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 67 |
| Conread position: | 219-476 |
| Cow position: | chrX:29765310-29765558 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 12, 64 |
| Conread position: | 221-374 |
| Cow position: | chrX:41886701-41886551 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 135, 101 |
| Conread position: | 223-435 |
| Cow position: | chrX:22565386-22565172 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 134, 85 |
| Conread position: | 223-436 |
| Cow position: | chrX:672689-672478 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 134, 48 |
| Conread position: | 223-436 |
| Cow position: | chrX:31340365-31340150 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 136, 82 |
| Conread position: | 223-438 |
| Cow position: | chrX:23573503-23573292 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 141, 48 |
| Conread position: | 223-441 |
| Cow position: | chrX:10301026-10300809 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 136, 32 |
| Conread position: | 223-441 |
| Cow position: | chrX:12639968-12639752 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 134, 60 |
| Conread position: | 223-441 |
| Cow position: | chrX:21492468-21492688 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 134, 66 |
| Conread position: | 223-460 |
| Cow position: | chrX:37814449-37814688 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 134, 85 |
| Conread position: | 223-539 |
| Cow position: | chrX:22810194-22810511 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 133, 85 |
| Conread position: | 224-378 |
| Cow position: | chrX:13179779-13179634 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 136, 62 |
| Conread position: | 224-429 |
| Cow position: | chrX:30167775-30167567 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 121, 114 |
| Conread position: | 224-433 |
| Cow position: | chrX:2480328-2480118 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 132, 83 |
| Conread position: | 224-433 |
| Cow position: | chrX:21581742-21581953 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 132, 84 |
| Conread position: | 224-433 |
| Cow position: | chrX:24444768-24444559 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 53 |
| Conread position: | 224-434 |
| Cow position: | chrX:5360309-5360521 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-435 |
| Cow position: | chrX:2560645-2560435 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 97, 64 |
| Conread position: | 224-435 |
| Cow position: | chrX:2814177-2813964 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-435 |
| Cow position: | chrX:9010633-9010846 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-435 |
| Cow position: | chrX:9127385-9127596 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-435 |
| Cow position: | chrX:12667029-12666816 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 135, 84 |
| Conread position: | 224-435 |
| Cow position: | chrX:13072146-13071933 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-435 |
| Cow position: | chrX:13092706-13092493 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-435 |
| Cow position: | chrX:13243958-13244171 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-435 |
| Cow position: | chrX:15978652-15978439 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-435 |
| Cow position: | chrX:32064862-32064655 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 133, 37 |
| Conread position: | 224-437 |
| Cow position: | chrX:16045271-16045486 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-437 |
| Cow position: | chrX:38589881-38589676 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 137, 20 |
| Conread position: | 224-438 |
| Cow position: | chrX:10529487-10529269 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-438 |
| Cow position: | chrX:13416124-13415911 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-438 |
| Cow position: | chrX:15177134-15176921 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 224-438 |
| Cow position: | chrX:16701984-16702199 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 131, 81 |
| Conread position: | 224-438 |
| Cow position: | chrX:16710266-16710484 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 70, 83 |
| Conread position: | 224-438 |
| Cow position: | chrX:30181625-30181409 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 224-441 |
| Cow position: | chrX:731255-731043 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 133, 42 |
| Conread position: | 224-441 |
| Cow position: | chrX:2118090-2117871 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 133, 89 |
| Conread position: | 224-441 |
| Cow position: | chrX:3407033-3406818 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 134, 66 |
| Conread position: | 224-441 |
| Cow position: | chrX:3466058-3465843 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 118, 47 |
| Conread position: | 224-441 |
| Cow position: | chrX:6196732-6196513 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:9086014-9086232 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 132, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:11458510-11458290 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 132, 81 |
| Conread position: | 224-441 |
| Cow position: | chrX:11462693-11462475 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 133, 92 |
| Conread position: | 224-441 |
| Cow position: | chrX:12308463-12308244 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:13406984-13406767 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 135, 18 |
| Conread position: | 224-441 |
| Cow position: | chrX:14597156-14597375 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 139, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:15622241-15622013 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:16781585-16781804 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 132, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:17890846-17891061 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 135, 25 |
| Conread position: | 224-441 |
| Cow position: | chrX:20357700-20357481 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:20741328-20741109 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:21766932-21767151 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:22818376-22818593 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 133, 46 |
| Conread position: | 224-441 |
| Cow position: | chrX:23133897-23134117 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 48, 28 |
| Conread position: | 224-441 |
| Cow position: | chrX:24412329-24412546 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 139, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:24445908-24445689 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 132, 89 |
| Conread position: | 224-441 |
| Cow position: | chrX:24730950-24731169 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 139, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:27304243-27304461 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 139, 40 |
| Conread position: | 224-441 |
| Cow position: | chrX:27317530-27317749 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 131, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:28587281-28587500 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 224-441 |
| Cow position: | chrX:28754037-28753818 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 135, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:29095015-29094796 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:29911634-29911853 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 132, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:30437207-30437426 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 133, 89 |
| Conread position: | 224-441 |
| Cow position: | chrX:31495036-31495258 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 224-441 |
| Cow position: | chrX:31727776-31727995 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 125, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:34008085-34008304 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:34093527-34093308 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 133, 89 |
| Conread position: | 224-441 |
| Cow position: | chrX:35532159-35532375 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:35887392-35887610 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 133, 42 |
| Conread position: | 224-441 |
| Cow position: | chrX:36691146-36690936 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 224-441 |
| Cow position: | chrX:37851445-37851664 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-441 |
| Cow position: | chrX:38963412-38963195 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 140, 46 |
| Conread position: | 224-441 |
| Cow position: | chrX:40642516-40642735 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 41, 36 |
| Conread position: | 224-441 |
| Cow position: | chrX:43437604-43437385 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-451 |
| Cow position: | chrX:15261317-15261086 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-452 |
| Cow position: | chrX:2486956-2487184 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 58, 33 |
| Conread position: | 224-452 |
| Cow position: | chrX:14783046-14782814 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-452 |
| Cow position: | chrX:36536430-36536198 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 139, 84 |
| Conread position: | 224-453 |
| Cow position: | chrX:18657501-18657272 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 133, 47 |
| Conread position: | 224-460 |
| Cow position: | chrX:1549281-1549503 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 224-460 |
| Cow position: | chrX:4906691-4906459 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 132, 30 |
| Conread position: | 224-460 |
| Cow position: | chrX:5865441-5865682 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 224-460 |
| Cow position: | chrX:7552506-7552264 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 224-460 |
| Cow position: | chrX:9094946-9095180 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 131, 81 |
| Conread position: | 224-460 |
| Cow position: | chrX:11147039-11146799 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 133, 91 |
| Conread position: | 224-460 |
| Cow position: | chrX:15122862-15122624 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 224-460 |
| Cow position: | chrX:16855048-16854828 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 224-460 |
| Cow position: | chrX:18192716-18192954 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 123, 84 |
| Conread position: | 224-460 |
| Cow position: | chrX:18951431-18951193 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 131, 84 |
| Conread position: | 224-460 |
| Cow position: | chrX:20725273-20725508 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 121, 84 |
| Conread position: | 224-460 |
| Cow position: | chrX:21225780-21226018 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 57, 64 |
| Conread position: | 224-460 |
| Cow position: | chrX:21413898-21414132 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 139, 76 |
| Conread position: | 224-460 |
| Cow position: | chrX:23388247-23388010 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 132, 63 |
| Conread position: | 224-460 |
| Cow position: | chrX:23394908-23395144 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 132, 58 |
| Conread position: | 224-460 |
| Cow position: | chrX:24468820-24468585 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 133, 30 |
| Conread position: | 224-460 |
| Cow position: | chrX:26756340-26756102 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 131, 84 |
| Conread position: | 224-460 |
| Cow position: | chrX:38149899-38150137 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 132, 84 |
| Conread position: | 224-465 |
| Cow position: | chrX:7754206-7754450 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-465 |
| Cow position: | chrX:16085929-16086169 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 133, 47 |
| Conread position: | 224-468 |
| Cow position: | chrX:12359190-12359437 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 224-472 |
| Cow position: | chrX:23279327-23279574 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 57, 64 |
| Conread position: | 224-488 |
| Cow position: | chrX:3082833-3082569 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 135, 60 |
| Conread position: | 224-539 |
| Cow position: | chrX:23453752-23453437 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 131, 81 |
| Conread position: | 224-539 |
| Cow position: | chrX:27978517-27978207 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 131, 46 |
| Conread position: | 224-694 |
| Cow position: | chrX:29046742-29047215 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 85 |
| Conread position: | 225-435 |
| Cow position: | chrX:17053871-17054083 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 117, 83 |
| Conread position: | 226-416 |
| Cow position: | chrX:23073448-23073642 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 226-434 |
| Cow position: | chrX:4327383-4327175 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 138, 82 |
| Conread position: | 226-441 |
| Cow position: | chrX:10413657-10413445 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 226-441 |
| Cow position: | chrX:13929428-13929215 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 134, 42 |
| Conread position: | 226-441 |
| Cow position: | chrX:20363840-20363614 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 226-460 |
| Cow position: | chrX:30229810-30229574 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 135, 82 |
| Conread position: | 232-435 |
| Cow position: | chrX:30137547-30137343 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 43 |
| Conread position: | 232-460 |
| Cow position: | chrX:21661753-21661523 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 125, 73 |
| Conread position: | 233-435 |
| Cow position: | chrX:12464317-12464520 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 125, 75 |
| Conread position: | 233-438 |
| Cow position: | chrX:20366861-20366655 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 138, 75 |
| Conread position: | 233-441 |
| Cow position: | chrX:26274454-26274664 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 124, 75 |
| Conread position: | 233-441 |
| Cow position: | chrX:26530265-26530476 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 37, 52 |
| Conread position: | 233-452 |
| Cow position: | chrX:8481760-8481983 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 124, 71 |
| Conread position: | 233-456 |
| Cow position: | chrX:22539728-22539504 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 123, 75 |
| Conread position: | 236-441 |
| Cow position: | chrX:41153123-41153330 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 120, 72 |
| Conread position: | 237-411 |
| Cow position: | chrX:22076616-22076441 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 114, 46 |
| Conread position: | 237-438 |
| Cow position: | chrX:28606770-28606568 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 68 |
| Conread position: | 242-441 |
| Cow position: | chrX:3360140-3360341 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 68 |
| Conread position: | 242-441 |
| Cow position: | chrX:29860124-29859923 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 8, 35 |
| Conread position: | 244-441 |
| Cow position: | chrX:33774303-33774103 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 65 |
| Conread position: | 256-441 |
| Cow position: | chrX:35285988-35286170 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 100, 29 |
| Conread position: | 258-435 |
| Cow position: | chrX:24463099-24462923 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 103, 27 |
| Conread position: | 261-435 |
| Cow position: | chrX:29878189-29878012 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 20, 48 |
| Conread position: | 267-441 |
| Cow position: | chrX:503530-503356 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 267-441 |
| Cow position: | chrX:19401334-19401510 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 42 |
| Conread position: | 307-461 |
| Cow position: | chrX:2226313-2226472 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 308-438 |
| Cow position: | chrX:24260989-24260855 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 118 |
| Conread position: | 309-441 |
| Cow position: | chrX:2381850-2381984 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 314-438 |
| Cow position: | chrX:6247812-6247686 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 317-437 |
| Cow position: | chrX:31512136-31512256 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 329-436 |
| Cow position: | chrX:4995064-4995174 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 564-696 |
| Cow position: | chrX:4406841-4406985 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
Show alignments to all cow chromosomes.