Cow genome map

Conread name: Ss1.1-Pig3-SRG8022E11.3

Conread position: 106-682
Cow position:
Alignm length: 607
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 130

Conread position: 152-501
Cow position:
Alignm length: 377
Alignm identity: 264
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 8, 88

Conread position: 157-406
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 79

Conread position: 157-758
Cow position:
Alignm length: 615
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 79

Conread position: 158-346
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 51

Conread position: 158-376
Cow position:
Alignm length: 219
Alignm identity: 150
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 158-378
Cow position:
Alignm length: 224
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 47

Conread position: 158-379
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 55, 34

Conread position: 158-379
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 90, 78

Conread position: 158-380
Cow position:
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 79

Conread position: 158-390
Cow position:
Alignm length: 238
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 72

Conread position: 158-398
Cow position:
Alignm length: 245
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 73

Conread position: 158-418
Cow position:
Alignm length: 264
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 78

Conread position: 158-418
Cow position:
Alignm length: 262
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 34

Conread position: 158-419
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 29

Conread position: 158-497
Cow position:
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 72

Conread position: 158-590
Cow position:
Alignm length: 440
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 158-655
Cow position:
Alignm length: 526
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 29

Conread position: 158-677
Cow position:
Alignm length: 531
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 62

Conread position: 158-691
Cow position:
Alignm length: 569
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 71

Conread position: 158-708
Cow position:
Alignm length: 563
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 77

Conread position: 158-744
Cow position:
Alignm length: 607
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 78

Conread position: 158-766
Cow position:
Alignm length: 616
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 78

Conread position: 159-377
Cow position:
Alignm length: 222
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 77

Conread position: 159-379
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 71

Conread position: 159-390
Cow position:
Alignm length: 237
Alignm identity: 169
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 51, 77

Conread position: 159-641
Cow position:
Alignm length: 497
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 71

Conread position: 159-767
Cow position:
Alignm length: 633
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 54

Conread position: 160-379
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 49, 76

Conread position: 160-767
Cow position:
Alignm length: 625
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 76

Conread position: 161-472
Cow position:
Alignm length: 317
Alignm identity: 202
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 75

Conread position: 162-377
Cow position:
Alignm length: 219
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 74

Conread position: 166-766
Cow position:
Alignm length: 629
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 70

Conread position: 167-767
Cow position:
Alignm length: 631
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 69

Conread position: 168-633
Cow position:
Alignm length: 478
Alignm identity: 312
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 10, 43

Conread position: 170-733
Cow position:
Alignm length: 582
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 41

Conread position: 174-509
Cow position:
Alignm length: 348
Alignm identity: 248
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 62

Conread position: 175-355
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 61

Conread position: 193-390
Cow position:
Alignm length: 201
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 13

Conread position: 194-401
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 42

Conread position: 210-499
Cow position:
Alignm length: 294
Alignm identity: 200
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 8, 26

Conread position: 212-446
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 40, 23

Conread position: 232-764
Cow position:
Alignm length: 550
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 79

Conread position: 242-497
Cow position:
Alignm length: 259
Alignm identity: 189
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 163, 5

Conread position: 255-485
Cow position:
Alignm length: 239
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 259-771
Cow position:
Alignm length: 541
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 52

Conread position: 275-765
Cow position:
Alignm length: 504
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 261

Conread position: 290-748
Cow position:
Alignm length: 473
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 65

Conread position: 294-754
Cow position:
Alignm length: 475
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 155

Conread position: 295-766
Cow position:
Alignm length: 492
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 57

Conread position: 340-765
Cow position:
Alignm length: 460
Alignm identity: 310
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 18, 31

Conread position: 350-779
Cow position:
Alignm length: 446
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 88

Conread position: 360-766
Cow position:
Alignm length: 412
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 44

Conread position: 365-767
Cow position:
Alignm length: 415
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 88

Conread position: 367-766
Cow position:
Alignm length: 414
Alignm identity: 269
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 7

Conread position: 378-615
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 115

Conread position: 378-672
Cow position:
Alignm length: 317
Alignm identity: 214
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 42, 9

Conread position: 378-771
Cow position:
Alignm length: 409
Alignm identity: 278
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 42, 104

Conread position: 379-741
Cow position:
Alignm length: 386
Alignm identity: 268
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 41, 172

Conread position: 380-767
Cow position:
Alignm length: 397
Alignm identity: 274
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 29, 164

Conread position: 383-527
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 403-771
Cow position:
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 128

Conread position: 411-769
Cow position:
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 11

Conread position: 415-654
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 84, 124

Conread position: 418-766
Cow position:
Alignm length: 354
Alignm identity: 232
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 172, 18

Conread position: 422-749
Cow position:
Alignm length: 349
Alignm identity: 244
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 55, 16

Conread position: 427-758
Cow position:
Alignm length: 342
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 114

Conread position: 431-766
Cow position:
Alignm length: 338
Alignm identity: 239
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 67, 107

Conread position: 431-774
Cow position:
Alignm length: 353
Alignm identity: 248
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 14, 8

Conread position: 436-766
Cow position:
Alignm length: 336
Alignm identity: 235
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 68, 31

Conread position: 440-766
Cow position:
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 7

Conread position: 447-603
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 447-766
Cow position:
Alignm length: 330
Alignm identity: 236
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 57, 19

Conread position: 455-641
Cow position:
Alignm length: 193
Alignm identity: 147
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 51, 85

Conread position: 460-750
Cow position:
Alignm length: 293
Alignm identity: 192
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 165, 71

Conread position: 461-766
Cow position:
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 77

Conread position: 473-764
Cow position:
Alignm length: 296
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 65

Conread position: 481-766
Cow position:
Alignm length: 289
Alignm identity: 214
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 111, 34

Conread position: 488-758
Cow position:
Alignm length: 281
Alignm identity: 195
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 40

Conread position: 488-764
Cow position:
Alignm length: 280
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 50

Conread position: 489-730
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 81

Conread position: 492-765
Cow position:
Alignm length: 275
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 49

Conread position: 494-731
Cow position:
Alignm length: 240
Alignm identity: 187
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 7, 44

Conread position: 497-756
Cow position:
Alignm length: 274
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 97, 40

Conread position: 499-766
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 6, 39

Conread position: 501-659
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 30

Conread position: 502-730
Cow position:
Alignm length: 230
Alignm identity: 178
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 94, 29

Conread position: 504-771
Cow position:
Alignm length: 272
Alignm identity: 199
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 14, 34

Conread position: 506-758
Cow position:
Alignm length: 260
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 86, 31

Conread position: 509-739
Cow position:
Alignm length: 233
Alignm identity: 179
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 83, 28

Conread position: 535-758
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 536-718
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 60, 56

Conread position: 536-754
Cow position:
Alignm length: 222
Alignm identity: 176
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 39, 34

Conread position: 536-766
Cow position:
Alignm length: 233
Alignm identity: 177
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 51, 31

Conread position: 536-780
Cow position:
Alignm length: 264
Alignm identity: 188
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 162

Conread position: 538-757
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 201

Conread position: 543-758
Cow position:
Alignm length: 224
Alignm identity: 169
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 69, 98

Conread position: 556-767
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 57, 13

Conread position: 557-768
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 181

Conread position: 565-732
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 566-758
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 23, 150

Conread position: 568-732
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 39, 54

Conread position: 568-756
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 571-749
Cow position:
Alignm length: 186
Alignm identity: 145
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 169

Conread position: 571-767
Cow position:
Alignm length: 204
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 101

Conread position: 573-758
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 35

Conread position: 575-766
Cow position:
Alignm length: 199
Alignm identity: 158
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 21, 17

Conread position: 606-758
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 75

Conread position: 606-766
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 609-761
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 610-704
Cow position:
Alignm length: 95
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 610-714
Cow position:
Alignm length: 105
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 610-765
Cow position:
Alignm length: 156
Alignm identity: 126
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 123, 0

Conread position: 610-766
Cow position:
Alignm length: 157
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 614-766
Cow position:
Alignm length: 154
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 46

Conread position: 616-727
Cow position:
Alignm length: 112
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 619-766
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 0

Conread position: 625-778
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 626-768
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 627-766
Cow position:
Alignm length: 140
Alignm identity: 117
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 106, 0

Conread position: 631-765
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 631-766
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 108

Conread position: 645-766
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 113, 88

Conread position: 655-766
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 32, 79

Show alignments to all cow chromosomes.