Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8022E11.3 |
| Conread position: | 106-682 |
| Cow position: | chr1:76780513-76779925 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 130 |
| Conread position: | 152-501 |
| Cow position: | chr1:63133604-63133971 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 8, 88 |
| Conread position: | 157-406 |
| Cow position: | chr1:23624156-23624402 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 53, 79 |
| Conread position: | 157-758 |
| Cow position: | chr1:85409875-85409279 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 79 |
| Conread position: | 158-346 |
| Cow position: | chr1:86364886-86365074 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 91, 51 |
| Conread position: | 158-376 |
| Cow position: | chr1:71331541-71331332 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 158-378 |
| Cow position: | chr1:70065799-70066018 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 47 |
| Conread position: | 158-379 |
| Cow position: | chr1:57646667-57646883 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 55, 34 |
| Conread position: | 158-379 |
| Cow position: | chr1:82406555-82406333 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 90, 78 |
| Conread position: | 158-380 |
| Cow position: | chr1:40161208-40161434 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 158-390 |
| Cow position: | chr1:86325611-86325378 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 72 |
| Conread position: | 158-398 |
| Cow position: | chr1:45572879-45572636 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 158-418 |
| Cow position: | chr1:40223042-40222787 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 78 |
| Conread position: | 158-418 |
| Cow position: | chr1:81371693-81371437 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 34 |
| Conread position: | 158-419 |
| Cow position: | chr1:19440023-19439768 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 29 |
| Conread position: | 158-497 |
| Cow position: | chr1:52206674-52207019 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 72 |
| Conread position: | 158-590 |
| Cow position: | chr1:30041732-30042146 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 158-655 |
| Cow position: | chr1:87914966-87914470 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 29 |
| Conread position: | 158-677 |
| Cow position: | chr1:40164234-40164739 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 62 |
| Conread position: | 158-691 |
| Cow position: | chr1:92551150-92550593 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 71 |
| Conread position: | 158-708 |
| Cow position: | chr1:74713453-74713993 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 77 |
| Conread position: | 158-744 |
| Cow position: | chr1:64479980-64479391 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 78 |
| Conread position: | 158-766 |
| Cow position: | chr1:18223874-18223281 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 78 |
| Conread position: | 159-377 |
| Cow position: | chr1:84152494-84152714 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 77 |
| Conread position: | 159-379 |
| Cow position: | chr1:42174593-42174371 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 50, 71 |
| Conread position: | 159-390 |
| Cow position: | chr1:54162809-54162575 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 51, 77 |
| Conread position: | 159-641 |
| Cow position: | chr1:22516540-22516996 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 71 |
| Conread position: | 159-767 |
| Cow position: | chr1:22495541-22496143 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 54 |
| Conread position: | 160-379 |
| Cow position: | chr1:52819294-52819511 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 49, 76 |
| Conread position: | 160-767 |
| Cow position: | chr1:64099281-64098684 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 76 |
| Conread position: | 161-472 |
| Cow position: | chr1:71938511-71938200 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 162-377 |
| Cow position: | chr1:1825780-1825993 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 74 |
| Conread position: | 166-766 |
| Cow position: | chr1:39244576-39243952 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 70 |
| Conread position: | 167-767 |
| Cow position: | chr1:34892562-34893170 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 168-633 |
| Cow position: | chr1:102556595-102557047 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 312 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 10, 43 |
| Conread position: | 170-733 |
| Cow position: | chr1:49727884-49728446 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 41 |
| Conread position: | 174-509 |
| Cow position: | chr1:11879157-11878821 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 36, 62 |
| Conread position: | 175-355 |
| Cow position: | chr1:61241759-61241938 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 61 |
| Conread position: | 193-390 |
| Cow position: | chr1:86614888-86615085 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 194-401 |
| Cow position: | chr1:72181835-72182040 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 42 |
| Conread position: | 210-499 |
| Cow position: | chr1:69061284-69061570 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 212-446 |
| Cow position: | chr1:22070307-22070541 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 232-764 |
| Cow position: | chr1:40420387-40419867 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 79 |
| Conread position: | 242-497 |
| Cow position: | chr1:77755879-77755625 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 163, 5 |
| Conread position: | 255-485 |
| Cow position: | chr1:45977997-45978235 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 259-771 |
| Cow position: | chr1:37432454-37432982 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 52 |
| Conread position: | 275-765 |
| Cow position: | chr1:82573141-82572650 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 261 |
| Conread position: | 290-748 |
| Cow position: | chr1:71555676-71555222 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 65 |
| Conread position: | 294-754 |
| Cow position: | chr1:31233222-31232770 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 155 |
| Conread position: | 295-766 |
| Cow position: | chr1:85351-85830 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 57 |
| Conread position: | 340-765 |
| Cow position: | chr1:69290290-69290733 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 310 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 350-779 |
| Cow position: | chr1:25885925-25885494 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 88 |
| Conread position: | 360-766 |
| Cow position: | chr1:14560344-14559957 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 44 |
| Conread position: | 365-767 |
| Cow position: | chr1:3750095-3750491 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 88 |
| Conread position: | 367-766 |
| Cow position: | chr1:79915408-79915800 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 378-615 |
| Cow position: | chr1:23887166-23887401 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 115 |
| Conread position: | 378-672 |
| Cow position: | chr1:56858427-56858735 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 42, 9 |
| Conread position: | 378-771 |
| Cow position: | chr1:6985637-6985249 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 42, 104 |
| Conread position: | 379-741 |
| Cow position: | chr1:41092974-41092599 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 41, 172 |
| Conread position: | 380-767 |
| Cow position: | chr1:28512441-28512060 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 274 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 29, 164 |
| Conread position: | 383-527 |
| Cow position: | chr1:80329832-80329681 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 403-771 |
| Cow position: | chr1:61241949-61242319 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 128 |
| Conread position: | 411-769 |
| Cow position: | chr1:101883859-101884208 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 11 |
| Conread position: | 415-654 |
| Cow position: | chr1:69204025-69203791 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 84, 124 |
| Conread position: | 418-766 |
| Cow position: | chr1:37432259-37432592 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 172, 18 |
| Conread position: | 422-749 |
| Cow position: | chr1:46268791-46268464 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 427-758 |
| Cow position: | chr1:65155523-65155188 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 114 |
| Conread position: | 431-766 |
| Cow position: | chr1:47371220-47371535 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 67, 107 |
| Conread position: | 431-774 |
| Cow position: | chr1:28408255-28407916 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 14, 8 |
| Conread position: | 436-766 |
| Cow position: | chr1:81371199-81370882 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 68, 31 |
| Conread position: | 440-766 |
| Cow position: | chr1:88017558-88017236 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 7 |
| Conread position: | 447-603 |
| Cow position: | chr1:61790796-61790632 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 447-766 |
| Cow position: | chr1:81292758-81293069 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 455-641 |
| Cow position: | chr1:19439511-19439324 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 51, 85 |
| Conread position: | 460-750 |
| Cow position: | chr1:8725524-8725808 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 165, 71 |
| Conread position: | 461-766 |
| Cow position: | chr1:9511984-9511695 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 473-764 |
| Cow position: | chr1:93832289-93832570 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 65 |
| Conread position: | 481-766 |
| Cow position: | chr1:11831632-11831903 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 214 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 111, 34 |
| Conread position: | 488-758 |
| Cow position: | chr1:82387248-82387513 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 488-764 |
| Cow position: | chr1:52207310-52207581 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 50 |
| Conread position: | 489-730 |
| Cow position: | chr1:8726397-8726147 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 10, 81 |
| Conread position: | 492-765 |
| Cow position: | chr1:45978978-45979236 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 494-731 |
| Cow position: | chr1:57757518-57757744 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 7, 44 |
| Conread position: | 497-756 |
| Cow position: | chr1:77755393-77755126 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 97, 40 |
| Conread position: | 499-766 |
| Cow position: | chr1:62041712-62041964 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 6, 39 |
| Conread position: | 501-659 |
| Cow position: | chr1:30518453-30518614 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 83, 30 |
| Conread position: | 502-730 |
| Cow position: | chr1:22071981-22072204 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 94, 29 |
| Conread position: | 504-771 |
| Cow position: | chr1:64745415-64745150 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 506-758 |
| Cow position: | chr1:101967019-101966770 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 86, 31 |
| Conread position: | 509-739 |
| Cow position: | chr1:37739449-37739226 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 83, 28 |
| Conread position: | 535-758 |
| Cow position: | chr1:96297073-96296864 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 536-718 |
| Cow position: | chr1:100132235-100132428 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 60, 56 |
| Conread position: | 536-754 |
| Cow position: | chr1:23510425-23510211 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 39, 34 |
| Conread position: | 536-766 |
| Cow position: | chr1:63134287-63134509 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 51, 31 |
| Conread position: | 536-780 |
| Cow position: | chr1:39251339-39251600 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 162 |
| Conread position: | 538-757 |
| Cow position: | chr1:6866048-6865824 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 53, 201 |
| Conread position: | 543-758 |
| Cow position: | chr1:79349264-79349048 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 69, 98 |
| Conread position: | 556-767 |
| Cow position: | chr1:31951740-31951953 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 57, 13 |
| Conread position: | 557-768 |
| Cow position: | chr1:100388076-100387862 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 181 |
| Conread position: | 565-732 |
| Cow position: | chr1:68332809-68332635 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 566-758 |
| Cow position: | chr1:80329564-80329370 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 23, 150 |
| Conread position: | 568-732 |
| Cow position: | chr1:20135688-20135855 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 39, 54 |
| Conread position: | 568-756 |
| Cow position: | chr1:40435006-40434829 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 571-749 |
| Cow position: | chr1:54365221-54365037 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 21, 169 |
| Conread position: | 571-767 |
| Cow position: | chr1:3746498-3746697 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 21, 101 |
| Conread position: | 573-758 |
| Cow position: | chr1:27546181-27546365 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 575-766 |
| Cow position: | chr1:11878785-11878589 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 21, 17 |
| Conread position: | 606-758 |
| Cow position: | chr1:54217416-54217263 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 14, 75 |
| Conread position: | 606-766 |
| Cow position: | chr1:72117344-72117197 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 609-761 |
| Cow position: | chr1:96049741-96049891 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 610-704 |
| Cow position: | chr1:78752566-78752472 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 610-714 |
| Cow position: | chr1:71086170-71086273 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 610-765 |
| Cow position: | chr1:59911022-59911175 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 610-766 |
| Cow position: | chr1:71272468-71272612 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 614-766 |
| Cow position: | chr1:78885414-78885265 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 27, 46 |
| Conread position: | 616-727 |
| Cow position: | chr1:69062426-69062537 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 619-766 |
| Cow position: | chr1:2203906-2203760 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 625-778 |
| Cow position: | chr1:34311330-34311480 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 626-768 |
| Cow position: | chr1:90370305-90370164 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 627-766 |
| Cow position: | chr1:53568093-53568231 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 631-765 |
| Cow position: | chr1:87910738-87910869 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 631-766 |
| Cow position: | chr1:19439036-19438896 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 54, 108 |
| Conread position: | 645-766 |
| Cow position: | chr1:23625302-23625423 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 113, 88 |
| Conread position: | 655-766 |
| Cow position: | chr1:71111839-71111727 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 32, 79 |
Show alignments to all cow chromosomes.