Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8022E11.3
        

               Conread position:
               118-758
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 44
               

               Conread position:
               155-354
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               5, 82
               

               Conread position:
               156-379
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               102, 50
               

               Conread position:
               157-765
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               158-365
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               89, 77
               

               Conread position:
               158-402
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               158-417
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               158-418
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               54, 79
               

               Conread position:
               158-510
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 76
               

               Conread position:
               158-602
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               335
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               60, 100
               

               Conread position:
               158-694
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 72
               

               Conread position:
               158-754
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 55
               

               Conread position:
               158-765
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               158-769
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 43
               

               Conread position:
               159-418
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               53, 74
               

               Conread position:
               159-766
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               161-359
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               51, 75
               

               Conread position:
               163-378
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               48, 116
               

               Conread position:
               166-766
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               167-433
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               43, 69
               

               Conread position:
               173-467
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               177-528
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               180-767
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               183-766
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 106
               

               Conread position:
               253-680
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 249
               

               Conread position:
               266-595
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               75, 15
               

               Conread position:
               276-558
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               43, 108
               

               Conread position:
               283-767
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 73
               

               Conread position:
               287-682
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               283
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               116, 74
               

               Conread position:
               293-533
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               296-766
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 96
               

               Conread position:
               316-767
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 13
               

               Conread position:
               324-640
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 221
               

               Conread position:
               340-766
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               289
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               376-699
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               30, 95
               

               Conread position:
               379-772
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               19, 7
               

               Conread position:
               394-756
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               26, 45
               

               Conread position:
               400-768
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               190, 21
               

               Conread position:
               418-717
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               69, 11
               

               Conread position:
               424-757
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               76, 98
               

               Conread position:
               433-766
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 9
               

               Conread position:
               439-774
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               460-633
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               141, 80
               

               Conread position:
               460-749
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               460-771
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               461-582
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               466-748
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               37, 72
               

               Conread position:
               474-766
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 65
               

               Conread position:
               482-766
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               20, 34
               

               Conread position:
               483-766
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 12
               

               Conread position:
               484-766
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               21, 29
               

               Conread position:
               487-684
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               105, 47
               

               Conread position:
               496-687
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               42, 15
               

               Conread position:
               496-766
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               117, 19
               

               Conread position:
               497-766
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               99, 39
               

               Conread position:
               500-774
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 37
               

               Conread position:
               505-754
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               87, 39
               

               Conread position:
               525-714
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               534-753
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 32
               

               Conread position:
               536-725
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               56, 46
               

               Conread position:
               536-739
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               56, 26
               

               Conread position:
               536-756
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               80, 56
               

               Conread position:
               536-769
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               79, 8
               

               Conread position:
               538-754
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               54, 215
               

               Conread position:
               547-725
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               46, 157
               

               Conread position:
               547-766
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               559-730
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               569-755
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               23, 145
               

               Conread position:
               569-755
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               42, 22
               

               Conread position:
               573-766
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               19, 171
               

               Conread position:
               583-766
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               583-766
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               9, 59
               

               Conread position:
               601-766
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               74, 7
               

               Conread position:
               604-758
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               87, 127
               

               Conread position:
               610-766
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               150, 48
               

               Conread position:
               610-769
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               119, 29
               

               Conread position:
               610-769
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               32, 100
               

               Conread position:
               621-755
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               631-766
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               648-766
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               659-757
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               74, 0
               
Show alignments to all cow chromosomes.