Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8022E11.3
        

               Conread position:
               155-718
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 82
               

               Conread position:
               157-379
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               56, 40
               

               Conread position:
               157-652
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 79
               

               Conread position:
               158-374
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               56, 76
               

               Conread position:
               158-377
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               158-476
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               56, 76
               

               Conread position:
               158-699
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 77
               

               Conread position:
               158-748
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 78
               

               Conread position:
               158-758
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 79
               

               Conread position:
               158-769
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 72
               

               Conread position:
               159-329
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               76, 43
               

               Conread position:
               159-379
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               90, 53
               

               Conread position:
               159-417
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               159-572
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 50
               

               Conread position:
               159-589
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 78
               

               Conread position:
               159-765
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               160-757
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               160-766
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 77
               

               Conread position:
               167-725
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 69
               

               Conread position:
               167-766
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               168-755
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 68
               

               Conread position:
               168-766
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 66
               

               Conread position:
               169-369
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               40, 67
               

               Conread position:
               169-721
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 64
               

               Conread position:
               170-346
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               177-779
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 59
               

               Conread position:
               179-725
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 6
               

               Conread position:
               194-662
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 42
               

               Conread position:
               209-434
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               176, 24
               

               Conread position:
               229-498
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               23, 56
               

               Conread position:
               255-758
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               256-409
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               257-614
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 9
               

               Conread position:
               259-766
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 284
               

               Conread position:
               263-538
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               118, 52
               

               Conread position:
               265-726
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 231
               

               Conread position:
               276-766
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 53
               

               Conread position:
               277-751
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 272
               

               Conread position:
               277-755
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 106
               

               Conread position:
               277-766
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 9
               

               Conread position:
               292-418
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               292-686
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 37
               

               Conread position:
               344-756
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               118, 39
               

               Conread position:
               347-758
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 35
               

               Conread position:
               363-780
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 20
               

               Conread position:
               373-742
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               76, 66
               

               Conread position:
               378-732
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               124, 20
               

               Conread position:
               380-748
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 95
               

               Conread position:
               395-756
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               25, 142
               

               Conread position:
               405-749
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 135
               

               Conread position:
               408-767
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 131
               

               Conread position:
               418-766
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 10
               

               Conread position:
               424-690
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               37, 51
               

               Conread position:
               439-667
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               170, 48
               

               Conread position:
               447-690
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               145, 48
               

               Conread position:
               447-704
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               80, 106
               

               Conread position:
               447-766
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               56, 94
               

               Conread position:
               447-771
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 87
               

               Conread position:
               456-698
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               133, 81
               

               Conread position:
               460-765
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               39, 68
               

               Conread position:
               460-771
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               461-767
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               38, 52
               

               Conread position:
               464-730
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 74
               

               Conread position:
               467-730
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               35, 64
               

               Conread position:
               479-766
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 52
               

               Conread position:
               487-731
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               191
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               16, 51
               

               Conread position:
               487-731
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               191
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               16, 51
               

               Conread position:
               492-766
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 84
               

               Conread position:
               495-757
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               7, 43
               

               Conread position:
               500-765
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               213
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               91, 37
               

               Conread position:
               500-766
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               92, 30
               

               Conread position:
               501-766
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               89, 36
               

               Conread position:
               522-766
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               88, 59
               

               Conread position:
               526-706
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               536-767
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               537-766
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 193
               

               Conread position:
               538-766
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 8
               

               Conread position:
               547-680
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               43, 63
               

               Conread position:
               549-764
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               41, 96
               

               Conread position:
               550-751
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               39, 78
               

               Conread position:
               550-766
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               44, 191
               

               Conread position:
               551-766
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               41, 61
               

               Conread position:
               551-766
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               43, 70
               

               Conread position:
               555-730
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 136
               

               Conread position:
               555-766
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               42, 22
               

               Conread position:
               557-768
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               566-717
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               575-721
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               589-764
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               111, 16
               

               Conread position:
               601-758
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               12, 32
               

               Conread position:
               608-753
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               608-764
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               608-766
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               610-766
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               150, 30
               

               Conread position:
               610-766
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               137
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               76, 52
               

               Conread position:
               610-766
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               613-766
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               617-766
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               75, 123
               

               Conread position:
               621-764
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               90, 113
               

               Conread position:
               635-766
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               98, 0
               
Show alignments to all cow chromosomes.