Cow genome map
Conread name: | Ss1.1-Pig3-SRG8022E11.3 |
Conread position: | 157-699 |
Cow position: | chr13:34931292-34931790 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 40 |
Conread position: | 158-305 |
Cow position: | chr13:25956518-25956371 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 116 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 61, 78 |
Conread position: | 158-379 |
Cow position: | chr13:46637128-46637341 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 155 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 143, 54 |
Conread position: | 158-381 |
Cow position: | chr13:22277181-22277405 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 163 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 51, 152 |
Conread position: | 158-381 |
Cow position: | chr13:43384628-43384856 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 175 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 48, 82 |
Conread position: | 158-454 |
Cow position: | chr13:38362280-38361978 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 78 |
Conread position: | 158-564 |
Cow position: | chr13:37497731-37498127 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 78 |
Conread position: | 158-754 |
Cow position: | chr13:38535384-38534808 (view UCSC Genome Browser custom track) |
Alignm length: | 613 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 76 |
Conread position: | 158-766 |
Cow position: | chr13:12325106-12325691 (view UCSC Genome Browser custom track) |
Alignm length: | 617 |
Alignm identity: | 452 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 78 |
Conread position: | 158-766 |
Cow position: | chr13:34265087-34264502 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 70 |
Conread position: | 158-768 |
Cow position: | chr13:45497259-45497870 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 30 |
Conread position: | 159-416 |
Cow position: | chr13:1368018-1367755 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 186 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 55, 230 |
Conread position: | 159-767 |
Cow position: | chr13:55406662-55407271 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 77 |
Conread position: | 163-390 |
Cow position: | chr13:46349510-46349737 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 173 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 49, 58 |
Conread position: | 163-640 |
Cow position: | chr13:39487335-39487813 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 61 |
Conread position: | 173-353 |
Cow position: | chr13:24373402-24373223 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 129 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 37, 63 |
Conread position: | 177-402 |
Cow position: | chr13:25716100-25715889 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 160 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 209-766 |
Cow position: | chr13:19115474-19116010 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 13 |
Conread position: | 212-764 |
Cow position: | chr13:34885019-34885585 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 26 |
Conread position: | 253-660 |
Cow position: | chr13:24675762-24676165 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 244, 130 |
Conread position: | 253-721 |
Cow position: | chr13:46464724-46464259 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 8 |
Conread position: | 255-684 |
Cow position: | chr13:34336360-34336767 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 58 |
Conread position: | 275-484 |
Cow position: | chr13:11441467-11441676 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 148 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 144, 108 |
Conread position: | 281-542 |
Cow position: | chr13:62272006-62271745 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 188 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 125, 148 |
Conread position: | 291-494 |
Cow position: | chr13:59997899-59997688 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 153 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 90, 110 |
Conread position: | 291-520 |
Cow position: | chr13:9103773-9103547 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 160 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 68, 93 |
Conread position: | 291-714 |
Cow position: | chr13:47325773-47325344 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 159 |
Conread position: | 291-726 |
Cow position: | chr13:51240859-51241294 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 92 |
Conread position: | 301-751 |
Cow position: | chr13:25955478-25955031 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 54 |
Conread position: | 303-504 |
Cow position: | chr13:30833978-30834172 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 147 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 134, 83 |
Conread position: | 308-714 |
Cow position: | chr13:17169346-17169745 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 284, 121 |
Conread position: | 319-767 |
Cow position: | chr13:44144256-44143801 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 157 |
Conread position: | 333-529 |
Cow position: | chr13:15489590-15489790 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 155 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 48, 166 |
Conread position: | 345-757 |
Cow position: | chr13:24404186-24403776 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 45 |
Conread position: | 351-667 |
Cow position: | chr13:21878498-21878170 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 245 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 40, 145 |
Conread position: | 353-560 |
Cow position: | chr13:18839113-18839323 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 155 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 65, 114 |
Conread position: | 366-621 |
Cow position: | chr13:26943003-26943262 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 199 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 54, 24 |
Conread position: | 369-758 |
Cow position: | chr13:17596984-17597362 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 278 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 51, 15 |
Conread position: | 377-750 |
Cow position: | chr13:11570765-11570413 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 256 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 56, 21 |
Conread position: | 378-585 |
Cow position: | chr13:4519125-4518922 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 150 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 50, 161 |
Conread position: | 378-668 |
Cow position: | chr13:21826376-21826645 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 198 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 13, 52 |
Conread position: | 378-766 |
Cow position: | chr13:15731353-15730965 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 270 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 42, 100 |
Conread position: | 386-674 |
Cow position: | chr13:20656548-20656853 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 222 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 34, 52 |
Conread position: | 387-758 |
Cow position: | chr13:19015248-19014870 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 269 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 33, 61 |
Conread position: | 387-761 |
Cow position: | chr13:33239735-33240117 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 136 |
Conread position: | 388-754 |
Cow position: | chr13:4947478-4947111 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 241 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 38, 212 |
Conread position: | 389-769 |
Cow position: | chr13:43803146-43803531 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 268 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 38, 148 |
Conread position: | 398-732 |
Cow position: | chr13:51142777-51142447 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 145 |
Conread position: | 417-732 |
Cow position: | chr13:28605673-28605990 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 22 |
Conread position: | 418-765 |
Cow position: | chr13:11223160-11222830 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 254 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 86, 13 |
Conread position: | 419-766 |
Cow position: | chr13:14080188-14079844 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 86 |
Conread position: | 422-757 |
Cow position: | chr13:43385066-43385388 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 25 |
Conread position: | 435-765 |
Cow position: | chr13:12213755-12214085 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 48 |
Conread position: | 438-734 |
Cow position: | chr13:5619403-5619104 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 212 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 61, 9 |
Conread position: | 439-767 |
Cow position: | chr13:26034598-26034295 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 239 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 295, 50 |
Conread position: | 444-629 |
Cow position: | chr13:47279996-47279809 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 143 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 55, 77 |
Conread position: | 459-726 |
Cow position: | chr13:12658014-12658269 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 196 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 44, 28 |
Conread position: | 460-771 |
Cow position: | chr13:4796125-4796438 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 77 |
Conread position: | 464-757 |
Cow position: | chr13:698693-698970 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 220 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 39, 66 |
Conread position: | 473-766 |
Cow position: | chr13:10854701-10854414 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 232 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 30, 19 |
Conread position: | 483-766 |
Cow position: | chr13:59997476-59997188 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 213 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 20, 51 |
Conread position: | 487-766 |
Cow position: | chr13:18597036-18596775 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 224 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 16, 51 |
Conread position: | 488-755 |
Cow position: | chr13:22984781-22985054 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 198 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 104, 49 |
Conread position: | 488-764 |
Cow position: | chr13:57611549-57611826 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 204 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 14, 50 |
Conread position: | 495-766 |
Cow position: | chr13:2416382-2416651 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 210 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 9, 37 |
Conread position: | 497-766 |
Cow position: | chr13:48580649-48580386 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 500-766 |
Cow position: | chr13:22193753-22194013 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 23 |
Conread position: | 502-766 |
Cow position: | chr13:38361953-38361690 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 203 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 90, 40 |
Conread position: | 525-730 |
Cow position: | chr13:57246105-57246310 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 149 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 66, 155 |
Conread position: | 535-755 |
Cow position: | chr13:6921224-6921002 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 170 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 64, 31 |
Conread position: | 536-696 |
Cow position: | chr13:9103244-9103082 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 132 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 538-758 |
Cow position: | chr13:25877493-25877703 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 168 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 27, 17 |
Conread position: | 540-758 |
Cow position: | chr13:18839444-18839663 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 171 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 66, 139 |
Conread position: | 545-766 |
Cow position: | chr13:14708748-14708976 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 178 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 47, 25 |
Conread position: | 546-765 |
Cow position: | chr13:18541341-18541557 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 153 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 61, 114 |
Conread position: | 547-767 |
Cow position: | chr13:62210366-62210575 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 155 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 134, 18 |
Conread position: | 552-758 |
Cow position: | chr13:4659682-4659472 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 164 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 40, 165 |
Conread position: | 571-770 |
Cow position: | chr13:15489927-15490133 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 161 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 21, 169 |
Conread position: | 572-766 |
Cow position: | chr13:30951063-30950859 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 153 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 20, 173 |
Conread position: | 574-769 |
Cow position: | chr13:48080178-48080379 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 148 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 15, 173 |
Conread position: | 590-766 |
Cow position: | chr13:27795826-27796003 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 139 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 22, 147 |
Conread position: | 609-766 |
Cow position: | chr13:51177602-51177759 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 125 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 151, 123 |
Conread position: | 610-766 |
Cow position: | chr13:20876638-20876481 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 125 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 98, 124 |
Conread position: | 610-766 |
Cow position: | chr13:57746299-57746457 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 129 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 71, 125 |
Conread position: | 642-766 |
Cow position: | chr13:20496477-20496353 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 118, 90 |
Show alignments to all cow chromosomes.