Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8022E11.3
        

               Conread position:
               155-379
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               6, 87
               

               Conread position:
               157-641
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 79
               

               Conread position:
               157-766
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 64
               

               Conread position:
               157-767
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 79
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               91, 47
               

               Conread position:
               158-384
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               96, 51
               

               Conread position:
               158-418
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               158-535
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 51
               

               Conread position:
               158-535
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               158-621
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 79
               

               Conread position:
               158-628
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               158-769
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 78
               

               Conread position:
               159-727
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 77
               

               Conread position:
               159-766
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 12
               

               Conread position:
               159-766
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               161-766
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 76
               

               Conread position:
               166-681
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 70
               

               Conread position:
               167-766
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 67
               

               Conread position:
               167-767
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 63
               

               Conread position:
               220-390
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 15
               

               Conread position:
               251-641
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 34
               

               Conread position:
               255-636
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               126, 149
               

               Conread position:
               255-710
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 128
               

               Conread position:
               255-767
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 28
               

               Conread position:
               257-674
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               135, 116
               

               Conread position:
               264-701
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 19
               

               Conread position:
               277-657
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 236
               

               Conread position:
               277-752
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 66
               

               Conread position:
               285-765
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 71
               

               Conread position:
               286-501
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               134, 24
               

               Conread position:
               291-572
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 61
               

               Conread position:
               339-696
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 161
               

               Conread position:
               340-757
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 188
               

               Conread position:
               366-667
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               31, 156
               

               Conread position:
               366-763
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 131
               

               Conread position:
               380-765
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 13
               

               Conread position:
               388-766
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 52
               

               Conread position:
               423-766
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               77, 19
               

               Conread position:
               424-766
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               75, 25
               

               Conread position:
               447-739
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 91
               

               Conread position:
               460-732
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               39, 79
               

               Conread position:
               460-761
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               35, 77
               

               Conread position:
               461-757
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               141, 71
               

               Conread position:
               461-766
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 68
               

               Conread position:
               483-708
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               10, 53
               

               Conread position:
               492-766
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               10, 38
               

               Conread position:
               501-780
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 36
               

               Conread position:
               502-765
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 23
               

               Conread position:
               503-689
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               69, 34
               

               Conread position:
               503-767
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               505-771
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               84, 32
               

               Conread position:
               536-766
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 30
               

               Conread position:
               536-777
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 33
               

               Conread position:
               539-766
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               542-758
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               556-766
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               36, 106
               

               Conread position:
               567-780
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               39, 25
               

               Conread position:
               568-767
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               23, 63
               

               Conread position:
               570-704
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               589-767
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               9, 32
               

               Conread position:
               608-766
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               135
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               608-767
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               14, 0
               
Show alignments to all cow chromosomes.