Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8022E11.3
        

               Conread position:
               155-379
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               6, 76
               

               Conread position:
               157-766
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 44
               

               Conread position:
               157-766
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 52
               

               Conread position:
               158-345
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 63
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               53, 36
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               60, 78
               

               Conread position:
               158-389
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               52, 71
               

               Conread position:
               158-457
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 78
               

               Conread position:
               158-708
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 71
               

               Conread position:
               158-739
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 76
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 76
               

               Conread position:
               158-767
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 21
               

               Conread position:
               159-363
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               54, 77
               

               Conread position:
               159-379
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 68
               

               Conread position:
               159-379
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               76, 46
               

               Conread position:
               159-415
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               52, 77
               

               Conread position:
               159-596
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               160-585
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 287
               

               Conread position:
               160-766
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 76
               

               Conread position:
               161-381
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               49, 75
               

               Conread position:
               168-765
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 68
               

               Conread position:
               193-499
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 43
               

               Conread position:
               209-765
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               229-640
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               294
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               24, 46
               

               Conread position:
               229-730
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 59
               

               Conread position:
               229-758
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 24
               

               Conread position:
               229-771
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 24
               

               Conread position:
               230-766
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 57
               

               Conread position:
               255-400
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-767
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 140
               

               Conread position:
               345-765
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 199
               

               Conread position:
               348-732
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 199
               

               Conread position:
               380-668
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               24, 115
               

               Conread position:
               380-754
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               266
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               26, 166
               

               Conread position:
               387-769
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               33, 116
               

               Conread position:
               388-585
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 12
               

               Conread position:
               388-757
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               258
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               111, 59
               

               Conread position:
               396-766
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 119
               

               Conread position:
               397-730
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 140
               

               Conread position:
               400-641
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               103, 117
               

               Conread position:
               402-765
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 48
               

               Conread position:
               418-766
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               253
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               43, 32
               

               Conread position:
               422-679
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               26, 118
               

               Conread position:
               423-766
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               80, 114
               

               Conread position:
               424-766
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               431-721
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               159, 56
               

               Conread position:
               447-673
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               21, 92
               

               Conread position:
               447-768
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               452-766
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 86
               

               Conread position:
               454-758
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 69
               

               Conread position:
               460-741
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 13
               

               Conread position:
               460-755
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               43, 51
               

               Conread position:
               460-769
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 81
               

               Conread position:
               460-777
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 80
               

               Conread position:
               462-765
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               465-757
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               39, 73
               

               Conread position:
               482-666
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               21, 55
               

               Conread position:
               488-732
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               497-766
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 34
               

               Conread position:
               501-766
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 36
               

               Conread position:
               502-765
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 45
               

               Conread position:
               503-694
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               81, 30
               

               Conread position:
               519-660
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               536-724
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               536-757
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               67, 211
               

               Conread position:
               536-757
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               61, 56
               

               Conread position:
               536-757
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               65, 73
               

               Conread position:
               536-766
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               54, 115
               

               Conread position:
               536-766
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               56, 31
               

               Conread position:
               570-766
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               30, 122
               

               Conread position:
               589-767
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               167, 35
               

               Conread position:
               608-757
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 85
               

               Conread position:
               608-766
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               7, 127
               

               Conread position:
               610-732
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               610-766
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               610-773
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               150, 55
               

               Conread position:
               614-766
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               96, 104
               

               Conread position:
               620-766
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               651-766
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               109, 81
               
Show alignments to all cow chromosomes.